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6T3F
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Crystal structure Nipah virus fusion glycoprotein in complex with a neutralising Fab fragment
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab66 heavy chain, ...
著者Avanzato, V.A, Pryce, R, Walter, T.S, Bowden, T.A.
登録日2019-10-10
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A structural basis for antibody-mediated neutralization of Nipah virus reveals a site of vulnerability at the fusion glycoprotein apex.
Proc.Natl.Acad.Sci.USA, 116, 2019
6T4R
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BU of 6t4r by Molmil
Crystal structure of Trypanosoma brucei Morn1
分子名称: MORN repeat-containing protein 1
著者Grishkovskaya, I, Kostan, J, Sajko, S, Morriswood, B, Djinovic-Carugo, K.
登録日2019-10-14
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.352 Å)
主引用文献Structures of three MORN repeat proteins and a re-evaluation of the proposed lipid-binding properties of MORN repeats.
Plos One, 15, 2020
1BVY
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BU of 1bvy by Molmil
COMPLEX OF THE HEME AND FMN-BINDING DOMAINS OF THE CYTOCHROME P450(BM-3)
分子名称: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, PROTEIN (CYTOCHROME P450 BM-3), ...
著者Sevrioukova, I.F, Li, H, Zhang, H, Peterson, J.A, Poulos, T.L.
登録日1998-09-21
公開日1999-02-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structure of a cytochrome P450-redox partner electron-transfer complex.
Proc.Natl.Acad.Sci.USA, 96, 1999
8HVP
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BU of 8hvp by Molmil
STRUCTURE AT 2.5-ANGSTROMS RESOLUTION OF CHEMICALLY SYNTHESIZED HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 PROTEASE COMPLEXED WITH A HYDROXYETHYLENE*-BASED INHIBITOR
分子名称: HIV-1 PROTEASE, INHIBITOR VAL-SER-GLN-ASN-LEU-PSI(CH(OH)-CH2)-VAL-ILE-VAL (U-85548E)
著者Jaskolski, M, Miller, M, Tomasselli, A.G, Sawyer, T.K, Staples, D.G, Heinrikson, R.L, Schneider, J, Kent, S.B.H, Wlodawer, A.
登録日1990-10-26
公開日1993-10-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure at 2.5-A resolution of chemically synthesized human immunodeficiency virus type 1 protease complexed with a hydroxyethylene-based inhibitor.
Biochemistry, 30, 1991
2MUT
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BU of 2mut by Molmil
Solution structure of the F231L mutant ERCC1-XPF dimerization region
分子名称: DNA excision repair protein ERCC-1, DNA repair endonuclease XPF
著者Faridounnia, M, Wienk, H, Kovacic, L, Folkers, G.E, Jaspers, N.G.J, Kaptein, R, Hoeijmakers, J.H.J, Boelens, R.
登録日2014-09-17
公開日2015-06-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Cerebro-oculo-facio-skeletal Syndrome Point Mutation F231L in the ERCC1 DNA Repair Protein Causes Dissociation of the ERCC1-XPF Complex.
J.Biol.Chem., 290, 2015
5JYG
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BU of 5jyg by Molmil
Cryo-EM structure of the MamK filament at 6.5 A
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin-like ATPase, MAGNESIUM ION
著者Bergeron, J.R.C, Hutto, R, Kollman, J.M.
登録日2016-05-13
公開日2016-07-27
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Structure of the magnetosome-associated actin-like MamK filament at subnanometer resolution.
Protein Sci., 26, 2017
6VK6
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BU of 6vk6 by Molmil
Crystal Structure of Methylosinus trichosporium OB3b Soluble Methane Monooxygenase Hydroxylase
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, FE (III) ION, ...
著者Jones, J.C, Banerjee, R, Shi, K, Aihara, H, Lipscomb, J.D.
登録日2020-01-18
公開日2020-08-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structural Studies of theMethylosinus trichosporiumOB3b Soluble Methane Monooxygenase Hydroxylase and Regulatory Component Complex Reveal a Transient Substrate Tunnel.
Biochemistry, 59, 2020
6JXM
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BU of 6jxm by Molmil
Crystal Structure of phi29 pRNA domain II
分子名称: BARIUM ION, MAGNESIUM ION, RNA (97-mer)
著者Cai, R, Price, I.R, Ding, F, Wu, F, Chen, T, Zhang, Y, Liu, G, Jardine, P.J, Lu, C, Ke, A.
登録日2019-04-24
公開日2019-08-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.32 Å)
主引用文献ATP/ADP modulates gp16-pRNA conformational change in the Phi29 DNA packaging motor.
Nucleic Acids Res., 47, 2019
1XCK
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BU of 1xck by Molmil
Crystal structure of apo GroEL
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 60 kDa chaperonin, DI(HYDROXYETHYL)ETHER, ...
著者Bartolucci, C, Lamba, D, Grazulis, S, Manakova, E, Heumann, H.
登録日2004-09-02
公開日2005-10-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Crystal structure of wild-type chaperonin GroEL
J.Mol.Biol., 354, 2005
6MPB
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BU of 6mpb by Molmil
Cryo-EM structure of the human neutral amino acid transporter ASCT2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMINE, Neutral amino acid transporter B(0)
著者Yu, X, Han, S.
登録日2018-10-05
公開日2019-11-06
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Cryo-EM structures of the human glutamine transporter SLC1A5 (ASCT2) in the outward-facing conformation.
Elife, 8, 2019
8AV8
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BU of 8av8 by Molmil
Small molecular stabilizer for ERalpha and 14-3-3 (1075300)
分子名称: 14-3-3 protein sigma, 2-chloranyl-~{N}-[[1-(1-phenoxycyclopentyl)carbonylpiperidin-4-yl]methyl]ethanamide, Estrogen receptor, ...
著者Visser, E.J, Vandenboorn, E.M.F, Ottmann, C.
登録日2022-08-26
公開日2023-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
8H2H
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BU of 8h2h by Molmil
Cryo-EM structure of a Group II Intron Complexed with its Reverse Transcriptase
分子名称: Group II intron-encoded protein LtrA, LtrB, RNA (5'-R(P*CP*AP*CP*AP*UP*CP*CP*AP*UP*AP*AP*C)-3')
著者Liu, N, Dong, X.L, Qu, G.S, Wang, J, Wang, H.W, Belfort, M.
登録日2022-10-06
公開日2022-11-23
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Functionalized graphene grids with various charges for single-particle cryo-EM.
Nat Commun, 13, 2022
5K3G
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BU of 5k3g by Molmil
Crystals structure of Acyl-CoA oxidase-1 in Caenorhabditis elegans, Apo form-I
分子名称: Acyl-coenzyme A oxidase
著者Zhang, X, Li, K, Jones, R.A, Bruner, S.D, Butcher, R.A.
登録日2016-05-19
公開日2016-08-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.859 Å)
主引用文献Structural characterization of acyl-CoA oxidases reveals a direct link between pheromone biosynthesis and metabolic state in Caenorhabditis elegans.
Proc.Natl.Acad.Sci.USA, 113, 2016
8AMY
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BU of 8amy by Molmil
High-resolution crystal structure of the Mu8.1 conotoxin from Conus Mucronatus
分子名称: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BICARBONATE ION, ...
著者Mueller, E, Hackney, C.M, Ellgaard, L, Morth, J.P.
登録日2022-08-04
公開日2023-08-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献High-resolution crystal structure of the Mu8.1 conotoxin from Conus mucronatus.
Acta Crystallogr.,Sect.F, 79, 2023
1G6Q
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BU of 1g6q by Molmil
CRYSTAL STRUCTURE OF YEAST ARGININE METHYLTRANSFERASE, HMT1
分子名称: HNRNP ARGININE N-METHYLTRANSFERASE
著者Weiss, V.H, McBride, A.E, Soriano, M.A, Filman, D.J, Silver, P.A, Hogle, J.M.
登録日2000-11-07
公開日2000-12-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The structure and oligomerization of the yeast arginine methyltransferase, Hmt1.
Nat.Struct.Biol., 7, 2000
6C3O
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BU of 6c3o by Molmil
Cryo-EM structure of human KATP bound to ATP and ADP in quatrefoil form
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family C member 8, ...
著者Lee, K.P.K, Chen, J, MacKinnon, R.
登録日2018-01-10
公開日2018-01-31
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Molecular structure of human KATP in complex with ATP and ADP
Elife, 6, 2017
1XIW
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BU of 1xiw by Molmil
Crystal structure of human CD3-e/d dimer in complex with a UCHT1 single-chain antibody fragment
分子名称: T-cell surface glycoprotein CD3 delta chain, T-cell surface glycoprotein CD3 epsilon chain, immunoglobulin heavy chain variable region, ...
著者Arnett, K.L, Harrison, S.C, Wiley, D.C.
登録日2004-09-22
公開日2004-11-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a human CD3-epsilon/delta dimer in complex with a UCHT1 single-chain antibody fragment.
Proc.Natl.Acad.Sci.USA, 101, 2004
8HDD
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BU of 8hdd by Molmil
Complex structure of catalytic, small, and a partial electron transfer subunits from Burkholderia cepacia FAD glucose dehydrogenase
分子名称: FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Glucose dehydrogenase, ...
著者Yoshida, H, Sode, K.
登録日2022-11-04
公開日2022-12-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Microgravity environment grown crystal structure information based engineering of direct electron transfer type glucose dehydrogenase.
Commun Biol, 5, 2022
1XZY
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BU of 1xzy by Molmil
Solution structure of the P30-trans form of Alpha Hemoglobin Stabilizing Protein (AHSP)
分子名称: Alpha-hemoglobin stabilizing protein
著者Gell, D.A, Feng, L, Zhou, S, Kong, Y, Lee, C, Weiss, M.J, Shi, Y, Mackay, J.P.
登録日2004-11-12
公開日2004-12-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Molecular mechanism of AHSP-mediated stabilization of alpha-hemoglobin
Cell(Cambridge,Mass.), 119, 2004
8T6I
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BU of 8t6i by Molmil
Structure of VHH-Fab complex with engineered Crystal Kappa region
分子名称: Fab heavy chain, Fab light chain, GLYCEROL, ...
著者Filippova, E.V, Thompson, I, Kossiakoff, A.A.
登録日2023-06-16
公開日2023-11-29
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
5N2F
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BU of 5n2f by Molmil
Structure of PD-L1/small-molecule inhibitor complex
分子名称: 4-[[4-[[3-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-methyl-phenyl]methoxy]-2,5-bis(fluoranyl)phenyl]methylamino]-3-oxidanylidene-butanoic acid, Programmed cell death 1 ligand 1
著者Guzik, K, Zak, K.M, Grudnik, P, Dubin, G, Holak, T.A.
登録日2017-02-07
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Small-Molecule Inhibitors of the Programmed Cell Death-1/Programmed Death-Ligand 1 (PD-1/PD-L1) Interaction via Transiently Induced Protein States and Dimerization of PD-L1.
J. Med. Chem., 60, 2017
8AU4
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BU of 8au4 by Molmil
Structural insights reveal a heterotetramer between oncogenic K-Ras4BG12V and Rgl2, a RalA/B activator
分子名称: Ral guanine nucleotide dissociation stimulator-like 2
著者Tariq, M, Ikeya, T, Togashi, N, Fairall, L, Alejo, C.B, Kamei, S, Alonso, B.R, Campillo, M.A.M, Hudson, A, Ito, Y, Schwabe, J, Dominguez, C, Tanaka, K.
登録日2022-08-25
公開日2023-08-23
最終更新日2023-10-25
実験手法SOLUTION NMR
主引用文献Structural insights into the complex of oncogenic KRas4B G12V and Rgl2, a RalA/B activator.
Life Sci Alliance, 7, 2024
1BSN
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BU of 1bsn by Molmil
SOLUTION STRUCTURE OF THE EPSILON SUBUNIT OF THE F1-ATPSYNTHASE FROM ESCHERICHIA COLI AND ORIENTATION OF THE SUBUNIT RELATIVE TO THE BETA SUBUNITS OF THE COMPLEX
分子名称: PROTEIN (EPSILON SUBUNIT)
著者Wilkens, S, Capaldi, R.A.
登録日1998-08-28
公開日1998-09-02
最終更新日2024-04-10
実験手法SOLUTION NMR
主引用文献Solution structure of the epsilon subunit of the F1-ATPase from Escherichia coli and interactions of this subunit with beta subunits in the complex.
J.Biol.Chem., 273, 1998
8SXS
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BU of 8sxs by Molmil
Crystal structure of a Nudix hydrolase effector from Magnaporthe oryzae
分子名称: Nudix hydrolase domain-containing protein
著者McCombe, C.L, Ericsson, D.J, Williams, S.J.
登録日2023-05-23
公開日2023-11-22
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Plant pathogenic fungi hijack phosphate starvation signaling with conserved enzymatic effectors
Biorxiv, 2023
6MZB
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BU of 6mzb by Molmil
Cryo-EM structure of phosphodiesterase 6
分子名称: GUANOSINE-3',5'-MONOPHOSPHATE, MAGNESIUM ION, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, ...
著者Gulati, S, Palczewski, K.
登録日2018-11-04
公開日2019-03-06
最終更新日2021-05-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of phosphodiesterase 6 reveals insights into the allosteric regulation of type I phosphodiesterases.
Sci Adv, 5, 2019

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