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3BE1
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Dual specific bH1 Fab in complex with the extracellular domain of HER2/ErbB-2
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Fragment-Heavy Chain, ...
著者Bostrom, J.M, Wiesmann, C, Appleton, B.A.
登録日2007-11-15
公開日2008-11-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Variants of the antibody herceptin that interact with HER2 and VEGF at the antigen binding site
Science, 323, 2009
1CB2
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BU of 1cb2 by Molmil
CELLOBIOHYDROLASE II, CATALYTIC DOMAIN, MUTANT Y169F
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CELLOBIOHYDROLASE II, alpha-D-mannopyranose
著者Kleywegt, G.J, Szardenings, M, Jones, T.A.
登録日1995-11-25
公開日1996-10-14
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The active site of Trichoderma reesei cellobiohydrolase II: the role of tyrosine 169.
Protein Eng., 9, 1996
3UGK
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BU of 3ugk by Molmil
Crystal Structure of C205S mutant and Saccharopine Dehydrogenase from Saccharomyces cerevisiae.
分子名称: Saccharopine dehydrogenase [NAD+, L-lysine-forming]
著者Cook, P.F, Kumar, V.P, Thomas, L.M, West, A.H, Bobyk, K.D.
登録日2011-11-02
公開日2012-02-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Evidence in Support of Lysine 77 and Histidine 96 as Acid-Base Catalytic Residues in Saccharopine Dehydrogenase from Saccharomyces cerevisiae.
Biochemistry, 51, 2012
8AXK
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BU of 8axk by Molmil
Type 3 secretion system export apparatus core, inner rod and needle of Shigella flexneri
分子名称: Lipoprotein MxiJ, Outer membrane protein MxiD, Protein MxiH, ...
著者Lunelli, M.
登録日2022-08-31
公開日2023-03-01
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (4.05 Å)
主引用文献Integrative structural analysis of the type III secretion system needle complex from Shigella flexneri.
Protein Sci., 32, 2023
5Y8K
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BU of 5y8k by Molmil
Mycobacterium tuberculosis 3-Hydroxyisobutyrate dehydrogenase (MtHIBADH) + L-serine
分子名称: (2~{S})-2-methylpentanedioic acid, ACRYLIC ACID, GLYCEROL, ...
著者Srikalaivani, R, Singh, A, Surolia, A, Vijayan, M.
登録日2017-08-21
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structure, interactions and action ofMycobacterium tuberculosis3-hydroxyisobutyric acid dehydrogenase.
Biochem. J., 475, 2018
5TJR
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BU of 5tjr by Molmil
X-ray Crystal structure of a methylmalonate semialdehyde dehydrogenase from Pseudomonas sp. AAC
分子名称: ADENOSINE-5'-DIPHOSPHATE, Methylmalonate-semialdehyde dehydrogenase
著者Peat, T.S, Newman, J.
登録日2016-10-05
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural Analysis Provides Mechanistic Insight into Nicotine Oxidoreductase from Pseudomonas putida.
Biochemistry, 55, 2016
5CPP
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BU of 5cpp by Molmil
THE STRUCTURAL BASIS FOR SUBSTRATE-INDUCED CHANGES IN REDOX POTENTIAL AND SPIN EQUILIBRIUM IN CYTOCHROME P-450(CAM)
分子名称: ADAMANTANONE, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE
著者Raag, R, Poulos, T.L.
登録日1990-05-18
公開日1991-07-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献The structural basis for substrate-induced changes in redox potential and spin equilibrium in cytochrome P-450CAM.
Biochemistry, 28, 1989
1JBS
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BU of 1jbs by Molmil
Crystal structure of ribotoxin restrictocin and a 29-mer SRD RNA analog
分子名称: 29-mer sarcin/ricin domain RNA analog, POTASSIUM ION, restrictocin
著者Yang, X, Gerczei, T, Glover, L, Correll, C.C.
登録日2001-06-06
公開日2001-10-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal structures of restrictocin-inhibitor complexes with implications for RNA recognition and base flipping.
Nat.Struct.Biol., 8, 2001
8J1K
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BU of 8j1k by Molmil
co-crystal structure of non-carboxylic acid inhibitor with PHD2
分子名称: Egl nine homolog 1, MANGANESE (II) ION, N-[(6-cyanopyridin-3-yl)methyl]-5-oxidanyl-2-[(3R)-3-oxidanylpyrrolidin-1-yl]-1,7-naphthyridine-6-carboxamide
著者Xu, J, Fu, Y, Ding, X, Meng, Q, Wang, L, Zhang, M, Ding, X, Ren, F, Zhavoronkov, A.
登録日2023-04-13
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.451 Å)
主引用文献co-crystal structure of non-carboxylic acid inhibitor with PHD2
To Be Published
8AJJ
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BU of 8ajj by Molmil
Crystal structure of the disulfide reductase MerA from Staphylococcus aureus
分子名称: Dihydrolipoamide dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, HISTIDINE
著者Weiland, P, Altegoer, F, Bange, G.
登録日2022-07-28
公開日2023-03-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献MerA functions as a hypothiocyanous acid reductase and defense mechanism in Staphylococcus aureus.
Mol.Microbiol., 119, 2023
5D3U
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BU of 5d3u by Molmil
Crystal structure of the 5-selective H176F mutant of Cytochrome TxtE
分子名称: CHLORIDE ION, GLYCEROL, P450-like protein, ...
著者Cahn, J.K.B, Dodani, S.C, Arnold, F.H.
登録日2015-08-06
公開日2016-06-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Discovery of a regioselectivity switch in nitrating P450s guided by molecular dynamics simulations and Markov models.
Nat.Chem., 8, 2016
6V52
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BU of 6v52 by Molmil
IDO1 IN COMPLEX WITH COMPOUND 1
分子名称: 3-chloro-N-{4-[1-(propylcarbamoyl)cyclobutyl]phenyl}benzamide, Indoleamine 2,3-dioxygenase 1
著者Lesburg, C.A, Koenig, K.V, Augustin, M.A.
登録日2019-12-03
公開日2020-04-08
最終更新日2020-04-29
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Strategic Incorporation of Polarity in Heme-Displacing Inhibitors of Indoleamine-2,3-dioxygenase-1 (IDO1).
Acs Med.Chem.Lett., 11, 2020
8J27
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BU of 8j27 by Molmil
GK monomer complexes with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Delta-1-pyrroline-5-carboxylate synthase B
著者Zhang, T, Guo, C.J, Liu, J.L.
登録日2023-04-14
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献GK monomer complexes with ADP
To Be Published
1C7J
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BU of 1c7j by Molmil
PNB ESTERASE 56C8
分子名称: POTASSIUM ION, PROTEIN (PARA-NITROBENZYL ESTERASE), SULFATE ION
著者Spiller, B, Gershenson, A, Arnold, F, Stevens, R.C.
登録日2000-02-21
公開日2000-03-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A structural view of evolutionary divergence.
Proc.Natl.Acad.Sci.USA, 96, 1999
5Y5L
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BU of 5y5l by Molmil
Time-resolved SFX structure of cytochrome P450nor: dark-2 data in the absence of NADH (resting state)
分子名称: NADP nitrous oxide-forming nitric oxide reductase, PROTOPORPHYRIN IX CONTAINING FE
著者Tosha, T, Nomura, T, Nishida, T, Saeki, N, Okubayashi, K, Yamagiwa, R, Sugahara, M, Nakane, T, Yamashita, K, Hirata, K, Ueno, G, Kimura, T, Hisano, T, Muramoto, K, Sawai, H, Takeda, H, Mizohata, E, Yamashita, A, Kanematsu, Y, Takano, Y, Nango, E, Tanaka, R, Nureki, O, Ikemoto, Y, Murakami, H, Owada, S, Tono, K, Yabashi, M, Yamamoto, M, Ago, H, Iwata, S, Sugimoto, H, Shiro, Y, Kubo, M.
登録日2017-08-09
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate.
Nat Commun, 8, 2017
3TF6
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BU of 3tf6 by Molmil
Crystal structure of Neutrophil gelatinase-associated lipocalin (C87S mutant) in complex with Europium and the siderophore analog tren(cam)(1,2-hopo)2
分子名称: 2,3-DIHYDROXY-BENZOIC ACID, CHLORIDE ION, EUROPIUM ION, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2011-08-15
公開日2011-09-07
最終更新日2019-02-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Parsing the functional specificity of Siderocalin / Lipocalin 2 / NGAL for siderophores and related small-molecule ligands
To be published, 7
5NE4
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BU of 5ne4 by Molmil
Crystal Structure of Foot and Mouth Disease Virus O PanAsia
分子名称: O PanAsia VP1, O PanAsia VP2, O PanAsia VP4, ...
著者Kotecha, A, StuarT, D.
登録日2017-03-09
公開日2017-06-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Rules of engagement between alpha v beta 6 integrin and foot-and-mouth disease virus.
Nat Commun, 8, 2017
6VA9
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BU of 6va9 by Molmil
Crystal structure of glucose-6-phosphate dehydrogenase R393H mutant in complex with catalytic NADP+
分子名称: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Horikoshi, N, Mochly-Rosen, D, Wakatsuki, S.
登録日2019-12-17
公開日2021-01-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.95 Å)
主引用文献Long-range structural defects by pathogenic mutations in most severe glucose-6-phosphate dehydrogenase deficiency.
Proc.Natl.Acad.Sci.USA, 118, 2021
5Y7G
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BU of 5y7g by Molmil
Crystal structure of paFAN1 bound to 1nt 5'flap DNA with gap
分子名称: CALCIUM ION, DNA (5'-D(P*GP*AP*AP*TP*GP*TP*GP*TP*GP*TP*CP*TP*CP*AP*AP*TP*CP*CP*CP*AP*AP*CP*TP*T)-3'), DNA (5'-D(P*GP*TP*TP*GP*GP*GP*AP*TP*TP*G)-3'), ...
著者Cho, Y, Jin, H.
登録日2017-08-17
公開日2018-03-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural mechanism of DNA interstrand cross-link unhooking by the bacterial FAN1 nuclease.
J. Biol. Chem., 293, 2018
8J0I
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BU of 8j0i by Molmil
Aldo-keto reductase KmAKR
分子名称: NADPH-dependent alpha-keto amide reductase, SODIUM ION
著者Xu, S.Y, Zhou, L, Xu, Y, Wang, Y.J, Zheng, Y.G.
登録日2023-04-11
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Aldo-keto reductase KmAKR from Kluyveromyces marxianus
To Be Published
5Y8M
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BU of 5y8m by Molmil
Mycobacterium tuberculosis 3-Hydroxyisobutyrate dehydrogenase (MtHIBADH) + NAD + (R)-3-hydroxyisobutyrate (R-HIBA)
分子名称: (2R)-3-HYDROXY-2-METHYLPROPANOIC ACID, (2~{S})-2-methylpentanedioic acid, ACRYLIC ACID, ...
著者Srikalaivani, R, Singh, A, Surolia, A, Vijayan, M.
登録日2017-08-21
公開日2018-07-11
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structure, interactions and action ofMycobacterium tuberculosis3-hydroxyisobutyric acid dehydrogenase.
Biochem. J., 475, 2018
8DCS
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BU of 8dcs by Molmil
Cryo-EM structure of cyanopindolol-bound beta1-adrenergic receptor in complex with heterotrimeric Gs-protein
分子名称: 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile, Endolysin,Endolysin,Beta-1 adrenergic receptor chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Su, M, Paknejad, N, Hite, R.K, Huang, X.Y.
登録日2022-06-17
公開日2022-07-27
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structures of beta 1 -adrenergic receptor in complex with Gs and ligands of different efficacies.
Nat Commun, 13, 2022
6V2M
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BU of 6v2m by Molmil
Structure of Escherichia coli Asp269Asn mutant phosphoenolpyruvate carboxykinase
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ...
著者Sokaribo, A.S, Cotelesage, J.H.
登録日2019-11-25
公開日2019-12-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Kinetic and structural analysis of Escherichia coli phosphoenolpyruvate carboxykinase mutants.
Biochim Biophys Acta Gen Subj, 1864, 2020
8J28
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GK monomer complexes with G5P and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Delta-1-pyrroline-5-carboxylate synthase B, GAMMA-GLUTAMYL PHOSPHATE
著者Zhang, T, Guo, C.J, Liu, J.L.
登録日2023-04-14
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献GK monomer complexes with G5P and ADP
To Be Published
8J3C
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BU of 8j3c by Molmil
Crystal structure of AtHPPD-Y19623 complex
分子名称: 4-hydroxyphenylpyruvate dioxygenase, 5-methyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-phenyl-quinazolin-4-one, COBALT (II) ION
著者Dong, J, Yang, G.-F, Lin, H.-Y.
登録日2023-04-16
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.703 Å)
主引用文献Crystal structure of AtHPPD-Y19623 complex
To Be Published

223790

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