PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

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6QNL	Three dimensional structure of human carbonic anhydrase XII in complex with benzenesulfonamide 分子名称: Carbonic anhydrase 12, ZINC ION, methyl 4-[(4-chloranyl-2-cyclohexylsulfanyl-5-sulfamoyl-phenyl)carbonylamino]butanoate 著者 Dvinskis, E, Leitans, J, Tars, K. 登録日 2019-02-11 公開日 2020-03-04 最終更新日 2021-10-06 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Halogenated and di-substituted benzenesulfonamides as selective inhibitors of carbonic anhydrase isoforms. Eur.J.Med.Chem., 185, 2020
5L3S	Structure of the GTPase heterodimer of crenarchaeal SRP54 and FtsY 分子名称: GLYCEROL, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ... 著者 Bange, G, Wild, K, Sinning, I. 登録日 2016-05-24 公開日 2016-06-08 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Basis for Conserved Regulation and Adaptation of the Signal Recognition Particle Targeting Complex. J.Mol.Biol., 428, 2016
6QO5	Crystal structure of apo (metal-free) ribonucleotide reductase NrdF from Bacillus anthracis 分子名称: CHLORIDE ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION 著者 Grave, K, Hogbom, M. 登録日 2019-02-12 公開日 2019-08-21 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.511 Å) 主引用文献 Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access. J.Biol.Inorg.Chem., 24, 2019
6RH3	Cryo-EM structure of E. coli RNA polymerase elongation complex bound to CTP substrate 分子名称: CYTIDINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Abdelkareem, M, Saint-Andre, C, Takacs, M, Papai, G, Crucifix, C, Guo, X, Ortiz, J, Weixlbaumer, A. 登録日 2019-04-18 公開日 2019-07-03 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural Basis of Transcription: RNA Polymerase Backtracking and Its Reactivation. Mol.Cell, 75, 2019
5L8E	Structure of UAF1 分子名称: GLYCEROL, Unknown, WD repeat-containing protein 48 著者 Dharadhar, S, Sixma, T. 登録日 2016-06-07 公開日 2016-09-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A conserved two-step binding for the UAF1 regulator to the USP12 deubiquitinating enzyme. J.Struct.Biol., 196, 2016
2M3B	Serine 16 phosphorylated phospholamban pentamer, Hybrid solution and solid-state NMR structural ensemble 分子名称: Cardiac phospholamban 著者 Vostrikov, V.V, Verardi, R, Veglia, G. 登録日 2013-01-15 公開日 2013-10-30 最終更新日 2023-06-14 実験手法 SOLID-STATE NMR, SOLUTION NMR 主引用文献 Structural Dynamics and Topology of Phosphorylated Phospholamban Homopentamer Reveal Its Role in the Regulation of Calcium Transport. Structure, 21, 2013
5L8Z	Structure of thermostable DNA-binding HU protein from micoplasma Spiroplasma melliferum 分子名称: DNA-binding protein, SODIUM ION 著者 Boyko, K.M, Gorbacheva, M.A, Rakitina, T.V, Korzhenevskiy, D.A, Kamashev, D.E, Vanyushkina, A.A, Lipkin, A.V, Popov, V.O. 登録日 2016-06-09 公開日 2016-06-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural basis of the high thermal stability of the histone-like HU protein from the mollicute Spiroplasma melliferum KC3. Sci Rep, 6, 2016
6QOY	Crystal structure of L1 protease Lysobacter sp. XL1 in complex with AEBSF 分子名称: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, 4-(2-azanylethyl)benzenesulfonic acid, CHLORIDE ION, ... 著者 Gabdulkhakov, A, Tishchenko, S, Kudryakova, I, Afoshin, A, Vasilyeva, N. 登録日 2019-02-13 公開日 2019-12-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Serine bacteriolytic protease L1 of Lysobacter sp. XL1 complexed with protease inhibitor AEBSF: features of interaction Process Biochem, 2019
6QP6	Cryo-EM structure of calcium-bound mTMEM16F lipid scramblase in digitonin 分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Anoctamin-6, CALCIUM ION 著者 Alvadia, C, Lim, N.K, Clerico Mosina, V, Oostergetel, G.T, Dutzler, R, Paulino, C. 登録日 2019-02-13 公開日 2019-03-06 最終更新日 2019-04-03 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structures and functional characterization of the murine lipid scramblase TMEM16F. Elife, 8, 2019
2MJZ	Capsid model of M13 bacteriophage virus from Magic-angle spinning NMR and Rosetta modeling 分子名称: Capsid protein G8P 著者 Morag, O, Sgourakis, N.G, Baker, D, Goldbourt, A. 登録日 2014-01-22 公開日 2015-01-07 最終更新日 2024-05-01 実験手法 SOLID-STATE NMR 主引用文献 The NMR-Rosetta capsid model of M13 bacteriophage reveals a quadrupled hydrophobic packing epitope. Proc.Natl.Acad.Sci.USA, 112, 2015
6QPH	Dunaliella minimal PSI complex 分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ... 著者 Klaiman, D, Caspy, I, Nelson, N. 登録日 2019-02-14 公開日 2020-02-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structure of a minimal photosystem I from the green alga Dunaliella salina. Nat.Plants, 6, 2020
2M0Y	Solution structure of the SH3 domain of DOCK180 分子名称: Dedicator of cytokinesis protein 1 著者 Liu, X, Wen, W. 登録日 2012-11-08 公開日 2012-12-19 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution structure of the SH3 domain of DOCK180. Proteins, 81, 2013
5L1T	X-ray Structure of M77S mutant of Cytochrome P450 PntM with pentalenolactone F 分子名称: PROTOPORPHYRIN IX CONTAINING FE, Pentalenolactone synthase, pentalenolactone F 著者 Duan, L, Jogl, G, Cane, D.E. 登録日 2016-07-29 公開日 2016-09-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.082 Å) 主引用文献 The Cytochrome P450-Catalyzed Oxidative Rearrangement in the Final Step of Pentalenolactone Biosynthesis: Substrate Structure Determines Mechanism. J.Am.Chem.Soc., 138, 2016
6ROE	Human Carbonic Anhydrase II in complex with fluorinated benzenesulfonamide 分子名称: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 2,6-DIFLUOROBENZENESULFONAMIDE, Carbonic anhydrase 2, ... 著者 Gloeckner, S, Heine, A, Klebe, G. 登録日 2019-05-12 公開日 2020-04-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (0.939 Å) 主引用文献 The Influence of Varying Fluorination Patterns on the Thermodynamics and Kinetics of Benzenesulfonamide Binding to Human Carbonic Anhydrase II. Biomolecules, 10, 2020
5LBB	HIF prolyl hydroxylase 2 (PHD2/EGLN1) R396T variant in complex with Mn(II) and N-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (IOX3/UN9) 分子名称: BICARBONATE ION, Egl nine homolog 1, MANGANESE (II) ION, ... 著者 Chowdhury, R, Schofield, C.J. 登録日 2016-06-15 公開日 2016-08-31 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases. Nat Commun, 7, 2016
6QRW	X-ray radiation dose series on xylose isomerase - 3.25 MGy 分子名称: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ... 著者 Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F. 登録日 2019-02-19 公開日 2019-07-17 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.17 Å) 主引用文献 Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both. J.Synchrotron Radiat., 26, 2019
2M2W	Ternary complex of ASFV Pol X with DNA and MgdGTP 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(P*GP*GP*CP*GP*AP*AP*GP*CP*CP*GP*GP*GP*TP*GP*CP*GP*AP*AP*GP*CP*AP*CP*(DOC))-3', MAGNESIUM ION, ... 著者 Wu, W, Su, M, Tsai, M. 登録日 2013-01-03 公開日 2014-04-02 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 How a low-fidelity DNA polymerase chooses non-Watson-Crick from Watson-Crick incorporation. J.Am.Chem.Soc., 136, 2014
5LBN	High-resolution crystal structure of the UBC core domain of UBE2E1/UbcH6 分子名称: GLYCEROL, Ubiquitin-conjugating enzyme E2 E1 著者 Anandapadamanaban, M, Moche, M, Sunnerhagen, M. 登録日 2016-06-16 公開日 2018-02-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Structure of a TRIM21 - UBE2E1 complex reveals the specificity of E2 and ubiquitin recognition by TRIM E3 RINGs To Be Published
5L3U	Thermolysin in complex with JC149 (MPD cryo protectant) 分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, N~2~-[(R)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-[(2R)-2,3,3-trimethylbutyl]-L-leucinamide, ... 著者 Krimmer, S.G, Cramer, J, Heine, A, Klebe, G. 登録日 2016-05-24 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.23 Å) 主引用文献 Rational Design of Thermodynamic and Kinetic Binding Profiles by Optimizing Surface Water Networks Coating Protein-Bound Ligands. J. Med. Chem., 59, 2016
6QRS	X-ray radiation dose series on xylose isomerase - 0.13 MGy 分子名称: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ... 著者 Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F. 登録日 2019-02-19 公開日 2019-07-17 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.17 Å) 主引用文献 Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both. J.Synchrotron Radiat., 26, 2019
6QS7	ClpB (DWB and K476C mutant) bound to casein in presence of ATPgammaS - state KC-2A 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, MAGNESIUM ION, ... 著者 Deville, C, Saibil, H.R. 登録日 2019-02-20 公開日 2019-07-03 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Two-Step Activation Mechanism of the ClpB Disaggregase for Sequential Substrate Threading by the Main ATPase Motor. Cell Rep, 27, 2019
2M20	EGFR transmembrane - juxtamembrane (TM-JM) segment in bicelles: MD guided NMR refined structure. 分子名称: Epidermal growth factor receptor 著者 Endres, N.F, Das, R, Smith, A, Arkhipov, A, Kovacs, E, Huang, Y, Pelton, J.G, Shan, Y, Shaw, D.E, Wemmer, D.E, Groves, J.T, Kuriyan, J. 登録日 2012-12-11 公開日 2013-02-20 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Conformational Coupling across the Plasma Membrane in Activation of the EGF Receptor. Cell(Cambridge,Mass.), 152, 2013
6QSQ	X-ray crystal structure of the R336L Vibrio alkaline phosphatase variant. 分子名称: 6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACID, Alkaline phosphatase, MAGNESIUM ION, ... 著者 Hjorleifsson, J.G, Helland, R, Asgeirsson, B. 登録日 2019-02-21 公開日 2020-01-29 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The high catalytic rate of the cold-active Vibrio alkaline phosphatase requires a hydrogen bonding network involving a large interface loop. Febs Open Bio, 2020
5L9R	HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with N-oxalylglycine (NOG) 分子名称: Egl nine homolog 1, GLYCEROL, MANGANESE (II) ION, ... 著者 Chowdhury, R, Schofield, C.J. 登録日 2016-06-10 公開日 2016-08-31 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases. Nat Commun, 7, 2016
6QUQ	Crystal structure of glutathionylated glycolytic glyceraldehyde-3- phosphate dehydrogenase from Arabidopsis thaliana (AtGAPC1) 分子名称: GLUTATHIONE, Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic, ... 著者 Fermani, S, Zaffagnini, M, Falini, G, Trost, P. 登録日 2019-02-28 公開日 2019-12-04 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.993 Å) 主引用文献 Glutathionylation primes soluble glyceraldehyde-3-phosphate dehydrogenase for late collapse into insoluble aggregates. Proc.Natl.Acad.Sci.USA, 116, 2019

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