PDB: 46200 件ウェブページステータス検索Chemie searchBIRD

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4CWE	Structural studies of rolling circle replication initiation protein from Staphylococcus aureus 分子名称: REPLICATION INITIATION PROTEIN 著者 Carr, S.B, Phillips, S.E.V, Thomas, C.D. 登録日 2014-04-02 公開日 2015-04-15 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structures of Replication Initiation Proteins from Staphylococcal Antibiotic Resistance Plasmids Reveal Protein Asymmetry and Flexibility are Necessary for Replication. Nucleic Acids Res., 44, 2016
1D8L	E. COLI HOLLIDAY JUNCTION BINDING PROTEIN RUVA NH2 REGION LACKING DOMAIN III 分子名称: PROTEIN (HOLLIDAY JUNCTION DNA HELICASE RUVA) 著者 Nishino, T, Iwasaki, H, Kataoka, M, Ariyoshi, M, Fujita, T, Shinagawa, H, Morikawa, K. 登録日 1999-10-25 公開日 2000-05-03 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Modulation of RuvB function by the mobile domain III of the Holliday junction recognition protein RuvA. J.Mol.Biol., 298, 2000
6A7U	Crystal structure of histone H2A.Bbd-H2B dimer 分子名称: Histone H2B type 2-E,Histone H2A-Bbd type 2/3 著者 Dai, L, Zhou, Z. 登録日 2018-07-04 公開日 2019-02-27 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of the histone heterodimer containing histone variant H2A.Bbd. Biochem. Biophys. Res. Commun., 503, 2018
6JDQ	Crystal structure of Nme1Cas9 in complex with sgRNA 分子名称: CRISPR-associated endonuclease Cas9, sgRNA 著者 Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y. 登録日 2019-02-02 公開日 2019-11-06 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States. Mol.Cell, 76, 2019
4CIJ	Structure of Rolling Circle Replication Initiator Protein from Geobacillus stearothermophilus. 分子名称: GST REP 著者 Carr, S.B, Phillips, S.E.V, Thomas, C.D. 登録日 2013-12-10 公開日 2014-12-24 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structures of Replication Initiation Proteins from Staphylococcal Antibiotic Resistance Plasmids Reveal Protein Asymmetry and Flexibility are Necessary for Replication. Nucleic Acids Res., 44, 2016
2WBN	Crystal structure of the g2p (large terminase) nuclease domain from the bacteriophage SPP1 分子名称: TERMINASE LARGE SUBUNIT 著者 Smits, C, Chechik, M, Kovalevskiy, O.V, Shevtsov, M.B, Foster, A.W, Alonso, J.C, Antson, A.A. 登録日 2009-03-02 公開日 2009-03-24 最終更新日 2011-10-12 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Basis for the Nuclease Activity of a Bacteriophage Large Terminase. Embo Rep., 10, 2009
2LG3	Structure of the duplex containing HNE derived (6S,8R,11S) gamma-HO-PdG when placed opposite dT 分子名称: (4S)-nonane-1,4-diol, DNA (5'-D(*GP*CP*TP*AP*GP*CP*GP*AP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*TP*TP*GP*CP*TP*AP*GP*C)-3') 著者 Huang, H, Wang, H, Kozekova, A, Lloyd, R.S, Rizzo, C.J, Stone, M.P. 登録日 2011-07-19 公開日 2012-08-01 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Ring-chain tautomerization of trans-4-hydroxynonenal derived (6S,8R,11S) gamma-hydroxy-1,N2-propano-deoxyguanosine adduct when placed opposite 2'-deoxythymidine in duplex To be Published
4DJA	Crystal structure of a prokaryotic (6-4) photolyase PhrB from Agrobacterium Tumefaciens with an Fe-S cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore at 1.45A resolution 分子名称: 1-deoxy-1-(6,7-dimethyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... 著者 Scheerer, P, Zhang, F, Oberpichler, I, Lamparter, T, Krauss, N. 登録日 2012-02-01 公開日 2013-04-17 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal structure of a prokaryotic (6-4) photolyase with an Fe-S cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore. Proc.Natl.Acad.Sci.USA, 110, 2013
4DKS	A spindle-shaped virus protein (chymotrypsin treated) 分子名称: Probable integrase 著者 Ouyang, S, Liang, W, Huang, L, Liu, Z.-J. 登録日 2012-02-04 公開日 2012-05-30 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural and functional characterization of the C-terminal catalytic domain of SSV1 integrase. Acta Crystallogr.,Sect.D, 68, 2012
1U1K	Crystal Structure of UP1 Complexed With d(TTAGGGTT 7DA GGG); A Human Telomeric Repeat Containing 7-deaza-adenine 分子名称: 5'-D(*TP*AP*GP*GP*GP*TP*TP*(7DA)P*GP*GP*G)-3', Heterogeneous nuclear ribonucleoprotein A1 著者 Myers, J.C, Shamoo, Y. 登録日 2004-07-15 公開日 2004-09-21 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Human UP1 as a Model for Understanding Purine Recognition in the Family of Proteins Containing the RNA Recognition Motif (RRM). J.Mol.Biol., 342, 2004
1U1N	Crystal Structure of UP1 Complexed With d(TTAGGGTTA (PRN)GG); A Human Telomeric Repeat Containing Nebularine 分子名称: 5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*(PRN)P*GP*G)-3', Heterogeneous nuclear ribonucleoprotein A1 著者 Myers, J.C, Shamoo, Y. 登録日 2004-07-15 公開日 2004-09-21 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Human UP1 as a Model for Understanding Purine Recognition in the Family of Proteins Containing the RNA Recognition Motif (RRM). J.Mol.Biol., 342, 2004
6XY5	Ternary complex of 14-3-3 sigma (C38N), Estrogen Related Receptor gamma (DBD) phosphopeptide, and disulfide PPI stabilizer 5 分子名称: 14-3-3 protein sigma, 3-bromanyl-~{N}-methyl-~{N}-(2-sulfanylethyl)benzamide, CHLORIDE ION, ... 著者 Somsen, B.A, Ottmann, C. 登録日 2020-01-29 公開日 2020-11-18 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Fluorescence Anisotropy-Based Tethering for Discovery of Protein-Protein Interaction Stabilizers. Acs Chem.Biol., 15, 2020
6AC7	Structure of a (3+1) hybrid G-quadruplex in the PARP1 promoter 分子名称: 5'-D(*TP*GP*GP*GP*GP*TP*CP*CP*GP*AP*GP*GP*CP*GP*GP*GP*GP*CP*TP*TP*GP*GP*G)-3' 著者 Sengar, A, Vandana, J.J, Chambers, V.S, Di Antonio, M, Winnerdy, F.R, Balasubramanian, S, Phan, A.T. 登録日 2018-07-25 公開日 2019-02-27 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure of a (3+1) hybrid G-quadruplex in the PARP1 promoter. Nucleic Acids Res., 47, 2019
1MVF	MazE addiction antidote 分子名称: PemI-like protein 1, immunoglobulin heavy chain variable region 著者 Loris, R, Marianovsky, I, Lah, J, Laeremans, T, Engelberg-Kulka, H, Glaser, G, Muyldermans, S, Wyns, L. 登録日 2002-09-25 公開日 2003-06-10 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal structure of the intrinsically flexible addiction antidote MazE. J.Biol.Chem., 278, 2003
2G1Z	X-ray structure of the oligonucleotide sequence d(AAATTT) 分子名称: 5'-D(*AP*AP*AP*TP*TP*T)-3' 著者 Valls, N, Santaolalla, A, Campos, J.L, Subirana, J.A. 登録日 2006-02-15 公開日 2006-03-21 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 Packing features of the all-AT oligonucleotide d(AAATTT). J.Biomol.Struct.Dyn., 24, 2007
2L4H	The Solution Structure of Calcium Bound CIB1 分子名称: CALCIUM ION, Calcium and integrin-binding protein 1 著者 Huang, H, Vogel, H.J. 登録日 2010-10-06 公開日 2011-03-09 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution Structures of Ca2+-CIB1 and Mg2+-CIB1 and Their Interactions with the Platelet Integrin {alpha}IIb Cytoplasmic Domain. J.Biol.Chem., 286, 2011
5B1L	The mouse nucleosome structure containing H3t 分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1, ... 著者 Urahama, T, Machida, S, Horikoshi, N, Osakabe, A, Tachiwana, H, Taguchi, H, Kurumizaka, H. 登録日 2015-12-08 公開日 2017-02-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Testis-Specific Histone Variant H3t Gene Is Essential for Entry into Spermatogenesis Cell Rep, 18, 2017
1OKF	NMR structure of an alpha-L-LNA:RNA hybrid 分子名称: 5'-D(*CP*ATLP*GP*AP*ATLP*AP*ATLP*GP*CP)-3', 5'-R(*GP*CP*AP*UP*AP*UP*CP*AP*GP)-3' 著者 Nielsen, J.T, Stein, P.C, Petersen, M. 登録日 2003-07-23 公開日 2003-10-09 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR Structure of an Alpha-L-Lna:RNA Hybrid: Structural Implications for Rnase H Recognition Nucleic Acids Res., 31, 2003
6LRB	The A form apo structure of NrS-1 C terminal region-CTR 分子名称: MAGNESIUM ION, Primase 著者 Chen, X, Gan, J. 登録日 2020-01-15 公開日 2020-04-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural studies reveal a ring-shaped architecture of deep-sea vent phage NrS-1 polymerase. Nucleic Acids Res., 48, 2020
1J1J	Crystal Structure of human Translin 分子名称: Translin 著者 Sugiura, I, Sasaki, C, Hasegawa, T, Kohno, T, Sugio, S, Moriyama, H, Kasai, M, Matsuzaki, T. 登録日 2002-12-06 公開日 2003-12-06 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of human translin at 2.2 A resolution. Acta Crystallogr.,Sect.D, 60, 2004
7R8F	Crystal structure of Pseudooceanicola lipolyticus Argonaute 分子名称: Argonaute 著者 Shin, Y, Murakami, K.S. 登録日 2021-06-26 公開日 2022-07-06 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (3.16 Å) 主引用文献 Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity. Nat Commun, 13, 2022
7R8K	Crystal structure of Pseudooceanicola lipolyticus Argonaute (SeMet labeled protein) 分子名称: Argonaute 著者 Shin, Y, Murakami, K.S. 登録日 2021-06-26 公開日 2022-07-06 最終更新日 2022-12-28 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity. Nat Commun, 13, 2022
2IFN	PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA 分子名称: PF1 FILAMENTOUS BACTERIOPHAGE 著者 Marvin, D.A. 登録日 1994-01-16 公開日 1996-01-01 最終更新日 2024-02-21 実験手法 FIBER DIFFRACTION (4 Å) 主引用文献 Pf1 filamentous bacteriophage: refinement of a molecular model by simulated annealing using 3.3 A resolution X-ray fibre diffraction data. Acta Crystallogr.,Sect.D, 51, 1995
2LVM	Solution structure of human 53BP1 tandem Tudor domains in complex with a histone H4K20me2 peptide 分子名称: Histone H4, Tumor suppressor p53-binding protein 1 著者 Cui, G, Botuyan, M, Mer, G. 登録日 2012-07-07 公開日 2012-12-12 最終更新日 2013-04-03 実験手法 SOLUTION NMR 主引用文献 Acetylation limits 53BP1 association with damaged chromatin to promote homologous recombination. Nat.Struct.Mol.Biol., 20, 2013
6Y1D	Binary complex of 14-3-3 sigma (C38N) with the Estrogen Related Receptor gamma (DBD) phosphopeptide 分子名称: 14-3-3 protein sigma, CHLORIDE ION, Estrogen related receptor gamma phosphopeptide, ... 著者 Somsen, B.A, Ottmann, C. 登録日 2020-02-12 公開日 2020-11-18 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Fluorescence Anisotropy-Based Tethering for Discovery of Protein-Protein Interaction Stabilizers. Acs Chem.Biol., 15, 2020

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