PDB: 1980 件ウェブページステータス検索Chemie searchBIRD

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1MBM	NSP4 proteinase from Equine Arteritis Virus 分子名称: chymotrypsin-like serine protease 著者 Barrette-Ng, I.H, Ng, K.K.-S, Mark, B.L, van Aken, D, Cherney, M.M, Garen, C, Kolodenko, Y, Gorbalenya, A.E, Snijder, E.J, James, M.N.G. 登録日 2002-08-03 公開日 2002-10-23 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of Arterivirus nsp4: the smallest chymotrypsin-like proteinase with an alpha/beta C-terminal extension and alternate conformations of the oxyanion hole J.Biol.Chem., 277, 2002
4L3B	X-ray structure of the HRV2 A particle uncoating intermediate 分子名称: Protein VP1, Protein VP2, Protein VP3 著者 Vives-Adrian, L, Querol-Audi, J, Garriga, D, Pous, J, Verdaguer, N. 登録日 2013-06-05 公開日 2013-11-27 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (6.5 Å) 主引用文献 Uncoating of common cold virus is preceded by RNA switching as determined by X-ray and cryo-EM analyses of the subviral A-particle. Proc.Natl.Acad.Sci.USA, 110, 2013
7LSG	Crystal structure of the human neutralizing antibody Fab fragment T025 bound to TBEV EDIII (Siberian Subtype) 分子名称: Core protein, T025 Fab Heavy Chain, T025 Fab Light Chain 著者 Keeffe, J.R, Bjorkman, P.J. 登録日 2021-02-18 公開日 2021-04-07 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Broad and potent neutralizing human antibodies to tick-borne flaviviruses protect mice from disease. J.Exp.Med., 218, 2021
1V9U	Human Rhinovirus 2 bound to a fragment of its cellular receptor protein 分子名称: CALCIUM ION, Coat protein VP1, Coat protein VP2, ... 著者 Verdaguer, N, Fita, I, Reithmayer, M, Moser, R, Blaas, D. 登録日 2004-02-03 公開日 2004-05-04 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 X-ray structure of a minor group human rhinovirus bound to a fragment of its cellular receptor protein NAT.STRUCT.MOL.BIOL., 11, 2004
2MMH	Unphosphorylated Mengovirus Leader Protein: NMR Studies of the Phosphorylation of the Mengovirus Leader Protein Reveal Stabilization of Intermolecular Domain Interactions 分子名称: Leader protein, ZINC ION 著者 Bacot-Davis, V.R, Porter, F.W, Palmenberg, A.C. 登録日 2014-03-15 公開日 2014-10-15 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Solution structures of Mengovirus Leader protein, its phosphorylated derivatives, and in complex with nuclear transport regulatory protein, RanGTPase. Proc.Natl.Acad.Sci.USA, 111, 2014
6CFP	CRYSTAL STRUCTURE OF POLYMERASE ACID PROTEIN (PA) FROM INFLUENZA A VIRUS, WILSON-SMITH/1933 (H1N1) BOUND TO FRAGMENT HIT BSI-70565 1-{1-[4-FLUOROPHENYL)METHYL]-2-METHYL-1H-IMIDAZOL-4-YL}ETHAN-1-ONE 分子名称: 1-{1-[(4-fluorophenyl)methyl]-2-methyl-1H-imidazol-4-yl}ethan-1-one, DIMETHYL SULFOXIDE, Ubiquitin-like protein SMT3,Polymerase acidic protein 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-02-15 公開日 2018-04-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 CRYSTAL STRUCTURE OF POLYMERASE ACID PROTEIN (PA) FROM INFLUENZA A VIRUS, WILSON-SMITH/1933 (H1N1) BOUND TO FRAGMENT HIT BSI-70565 1-{1-[4-FLUOROPHENYL)METHYL]-2-METHYL-1H-IMIDAZOL-4-YL}ETHAN-1-ONE To Be Published
3GQO	Crystal structure of macro domain of Venezuelan Equine Encephalitis virus in complex with ADP-ribose 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Non-structural protein 3 著者 Malet, H, Jamal, S, Coutard, B, Ferron, F, Canard, B. 登録日 2009-03-24 公開日 2009-07-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The crystal structures of Chikungunya and Venezuelan equine encephalitis virus nsP3 macro domains define a conserved adenosine binding pocket J.Virol., 83, 2009
2FP7	West Nile Virus NS2B/NS3protease in complex with Bz-Nle-Lys-Arg-Arg-H 分子名称: Genome polyprotein, N-benzoyl-L-norleucyl-L-lysyl-N-[(2S)-5-carbamimidamido-1-hydroxypentan-2-yl]-L-argininamide 著者 Schiering, N, D'Arcy, A, Erbel, P. 登録日 2006-01-16 公開日 2006-03-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Structural basis for the activation of flaviviral NS3 proteases from dengue and West Nile virus. Nat.Struct.Mol.Biol., 13, 2006
6DCZ	The N-terminal domain of PA endonuclease from the influenza H1N1 virus in complex with 3-hydroxy-4-oxo-4H-pyran-2-carboxylic acid 分子名称: 3-hydroxy-4-oxo-4H-pyran-2-carboxylic acid, MANGANESE (II) ION, Polymerase acidic protein 著者 Dick, B.L, Morrison, C.N, Cohen, S.M. 登録日 2018-05-08 公開日 2018-11-07 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 Structure-Activity Relationships in Metal-Binding Pharmacophores for Influenza Endonuclease. J. Med. Chem., 61, 2018
1XCQ	Complex HCV core-Fab 19D9D6-Protein L mutant (D55A,L57H,Y64W) in space group P21 分子名称: Capsid protein C, Monoclonal antibody 19D9D6 Heavy chain, Monoclonal antibody 19D9D6 Light chain, ... 著者 Menez, R, Housden, N.G, Harrison, S, Jolivet-Reynaud, C, Gore, M.G, Stura, E.A. 登録日 2004-09-03 公開日 2005-05-31 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Different crystal packing in Fab-protein L semi-disordered peptide complex. Acta Crystallogr.,Sect.D, 61, 2005
1R6R	Solution Structure of Dengue Virus Capsid Protein Reveals a New Fold 分子名称: Genome polyprotein 著者 Ma, L, Jones, C.T, Groesch, T.D, Kuhn, R.J, Post, C.B. 登録日 2003-10-16 公開日 2004-02-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of dengue virus capsid protein reveals another fold Proc.Natl.Acad.Sci.USA, 101, 2004
1XCT	Complex HCV core-Fab 19D9D6-Protein L mutant (D55A, L57H, Y64W) in space group P21212 分子名称: Capsid protein C, Monoclonal antibody 19D9D6 Heavy chain, Monoclonal antibody 19D9D6 Light chain, ... 著者 Menez, R, Housden, N.G, Harrison, S, Jolivet-Reynaud, C, Gore, M.G, Stura, E.A. 登録日 2004-09-03 公開日 2005-05-31 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Different crystal packing in Fab-protein L semi-disordered peptide complex. Acta Crystallogr.,Sect.D, 61, 2005
1RGQ	M9A HCV Protease complex with pentapeptide keto-amide inhibitor 分子名称: N-(PYRAZIN-2-YLCARBONYL)LEUCYLISOLEUCYL-N~1~-{1-[2-({1-CARBOXY-2-[4-(PHOSPHONOOXY)PHENYL]ETHYL}AMINO)-1,1-DIHYDROXY-2-OXOETHYL]BUT-3-ENYL}-3-CYCLOHEXYLALANINAMIDE, NS3 Protease, NS4A peptide, ... 著者 Liu, Y, Stoll, V.S, Richardson, P.L, Saldivar, A, Klaus, J.L, Molla, A, Kohlbrenner, W, Kati, W.M. 登録日 2003-11-12 公開日 2004-10-19 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Hepatitis C NS3 protease inhibition by peptidyl-alpha-ketoamide inhibitors: kinetic mechanism and structure. Arch.Biochem.Biophys., 421, 2004
4JZN	Three dimensional structure of broadly neutralizing human anti - Hepatitis C virus (HCV) glycoprotein E2 Fab fragment HC84-1 分子名称: Anti-HCV E2 Fab HC84-1 heavy chain, Anti-HCV E2 Fab HC84-1 light chain, Envelope glycoprotein E2, ... 著者 Krey, T, Rey, F.A. 登録日 2013-04-03 公開日 2013-06-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural basis of HCV neutralization by human monoclonal antibodies resistant to viral neutralization escape. Plos Pathog., 9, 2013
4JZO	Three dimensional structure of broadly neutralizing human anti - Hepatitis C virus (HCV) glycoprotein E2 Fab fragment HC84-27 分子名称: Anti-HCV E2 Fab HC84-27 heavy chain, Anti-HCV E2 Fab HC84-27 light chain, Envelope glycoprotein E2 著者 Krey, T, Rey, F.A. 登録日 2013-04-03 公開日 2013-06-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Structural basis of HCV neutralization by human monoclonal antibodies resistant to viral neutralization escape. Plos Pathog., 9, 2013
2VRI	Structure of the NSP3 X-domain of human coronavirus NL63 分子名称: 1,2-ETHANEDIOL, NON-STRUCTURAL PROTEIN 3 著者 Piotrowski, Y, Mesters, J.R, Moll, R, Hilgenfeld, R. 登録日 2008-04-08 公開日 2009-06-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of the Nsp3 X-Domain of Human Coronavirus Nl63 To be Published
6DCY	The N-terminal domain of PA endonuclease from the influenza H1N1 virus in complex with 5-hydroxy-2-methyl-4-oxo-4H-pyran-3-carboxylic acid 分子名称: 5-hydroxy-2-methyl-4-oxo-4H-pyran-3-carboxylic acid, MANGANESE (II) ION, Polymerase acidic protein 著者 Dick, B.L, Morrison, C.N, Cohen, S.M. 登録日 2018-05-08 公開日 2018-11-07 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Structure-Activity Relationships in Metal-Binding Pharmacophores for Influenza Endonuclease. J. Med. Chem., 61, 2018
2GMO	NMR-structure of an independently folded C-terminal domain of influenza polymerase subunit PB2 分子名称: Polymerase basic protein 2 著者 Boudet, J, Tarendeau, F, Guilligay, D, Mas, P, Bougault, C.M, Cusack, S, Simorre, J.-P, Hart, D.J. 登録日 2006-04-07 公開日 2007-02-27 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structure and nuclear import function of the C-terminal domain of influenza virus polymerase PB2 subunit. Nat.Struct.Mol.Biol., 14, 2007
1SVB	ENVELOPE GLYCOPROTEIN FROM TICK-BORNE ENCEPHALITIS VIRUS 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, TICK-BORNE ENCEPHALITIS VIRUS GLYCOPROTEIN 著者 Rey, F.A, Harrison, S.C. 登録日 1995-11-27 公開日 1996-06-10 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The envelope glycoprotein from tick-borne encephalitis virus at 2 A resolution. Nature, 375, 1995
1XF5	Complex HCV core-Fab 19D9D6-Protein L mutant (H74C, Y64W)in space group P21212 分子名称: Capsid protein C, Monoclonal antibody 19D9D6 Heavy chain, Monoclonal antibody 19D9D6 Light chain, ... 著者 Menez, R, Housden, N.G, Harrison, S, Jolivet-Reynaud, C, Gore, M.G, Stura, E.A. 登録日 2004-09-14 公開日 2005-05-31 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Different crystal packing in Fab-protein L semi-disordered peptide complex. Acta Crystallogr.,Sect.D, 61, 2005
6E0Q	The N-terminal domain of PA endonuclease from the influenza H1N1 virus in complex with 4,6-dihydroxy-2-methyl-5-oxocyclohepta-1,3,6-triene-1-carboxylic acid 分子名称: 1,2-ETHANEDIOL, 4,6-dihydroxy-2-methyl-5-oxocyclohepta-1,3,6-triene-1-carboxylic acid, MANGANESE (II) ION, ... 著者 Dick, B.L, Morrison, C.N, Cohen, S.M. 登録日 2018-07-06 公開日 2018-11-07 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structure-Activity Relationships in Metal-Binding Pharmacophores for Influenza Endonuclease. J. Med. Chem., 61, 2018
6DZQ	The N-terminal domain of PA endonuclease from the influenza H1N1 virus in complex with 3-hydroxy-6-methyl-4-oxo-4H-pyran-2-carboxylic acid 分子名称: 1,2-ETHANEDIOL, 3-hydroxy-6-methyl-4-oxo-4H-pyran-2-carboxylic acid, MANGANESE (II) ION, ... 著者 Dick, B.L, Morrison, C.N, Cohen, S.M. 登録日 2018-07-05 公開日 2018-11-07 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structure-Activity Relationships in Metal-Binding Pharmacophores for Influenza Endonuclease. J. Med. Chem., 61, 2018
6FFS	Structure-based design and synthesis of macrocyclic human rhinovirus 3C protease inhibitors 分子名称: 3C Protease, SULFATE ION, ~{N}-[(2~{S},5~{S},14~{S})-2-[(4-fluorophenyl)methyl]-5-(hydroxymethyl)-9-methyl-3,8,15-tris(oxidanylidene)-1,4,9-triazacyclopentadec-14-yl]-5-methyl-1,2-oxazole-3-carboxamide 著者 Wiesmann, C, Farady, C. 登録日 2018-01-09 公開日 2018-02-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structure-based design and synthesis of macrocyclic human rhinovirus 3C protease inhibitors. Bioorg. Med. Chem. Lett., 28, 2018
2WZR	The Structure of Foot and Mouth Disease Virus Serotype SAT1 分子名称: POLYPROTEIN 著者 Adams, P, Lea, S, Newman, J, Blakemore, W, King, A, Stuart, D, Fry, E. 登録日 2009-12-02 公開日 2010-12-08 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The Structure of Foot-and-Mouth Disease Virus Serotype Sat1. To be Published
2JZF	NMR Conformer closest to the mean coordinates of the domain 513-651 of the SARS-CoV nonstructural protein nsp3 分子名称: Replicase polyprotein 1ab 著者 Chatterjee, A, Johnson, M.A, Serrano, P, Pedrini, B, Joseph, J, Saikatendu, K, Neuman, B, Stevens, R.C, Wilson, I.A, Buchmeier, M.J, Kuhn, P, Wuthrich, K, Joint Center for Structural Genomics (JCSG) 登録日 2008-01-04 公開日 2008-02-05 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Nuclear magnetic resonance structure shows that the severe acute respiratory syndrome coronavirus-unique domain contains a macrodomain fold. J.Virol., 83, 2009

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