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8FR3
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E. coli EF-Tu in complex with KKL-55
分子名称: 3-chloro-N-(1-propyl-1H-tetrazol-5-yl)benzamide, Elongation factor Tu, GUANOSINE-5'-DIPHOSPHATE, ...
著者Nguyen, H.A, Kuzmishin Nagy, A.B, Dunham, C.M.
登録日2023-01-06
公開日2023-09-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Antibiotic that inhibits trans -translation blocks binding of EF-Tu to tmRNA but not to tRNA.
Mbio, 14, 2023
6LUL
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BU of 6lul by Molmil
NMR structure and dynamics studies of yeast respiratory super-complex factor 2 in micelles
分子名称: Respiratory supercomplex factor 2, mitochondrial
著者Zhou, S, Pontus, P, Peter, B, Maler, L, Adelroth, P.
登録日2020-01-29
公開日2020-10-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR Structure and Dynamics Studies of Yeast Respiratory Supercomplex Factor 2.
Structure, 29, 2021
6IMF
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BU of 6imf by Molmil
Crystal structure of TOXIN/ANTITOXIN complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cysteine-rich venom protein triflin, GLYCEROL, ...
著者Shioi, N, Tadokoro, T, Shioi, S, Hu, Y, Kurahara, L.H, Okabe, Y, Matsubara, H, Kita, S, Ose, T, Kuroki, K, Maenaka, K, Terada, S.
登録日2018-10-22
公開日2018-12-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the complex between venom toxin and serum inhibitor from Viperidae snake.
J. Biol. Chem., 294, 2019
6S1V
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BU of 6s1v by Molmil
Crystal structure of dimeric M-PMV protease D26N mutant in complex with inhibitor
分子名称: Gag-Pro-Pol polyprotein, PRO-0A1-VAL-PSA-ALA-MET-THR
著者Wosicki, S, Gilski, M, Jaskolski, M, Zabranska, H, Pichova, I.
登録日2019-06-19
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Comparison of a retroviral protease in monomeric and dimeric states.
Acta Crystallogr D Struct Biol, 75, 2019
8A8R
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BU of 8a8r by Molmil
Crystal structure of TEAD4 in complex with YAP peptide
分子名称: Isoform 7 of Transcriptional coactivator YAP1, MYRISTIC ACID, Transcriptional enhancer factor TEF-3
著者Scheufler, C, Kallen, J.
登録日2022-06-23
公開日2022-12-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.696 Å)
主引用文献N-terminal beta-strand in YAP is critical for stronger binding to scalloped relative to TEAD transcription factor.
Protein Sci., 32, 2023
6UTB
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BU of 6utb by Molmil
CRYSTAL STRUCTURE OF UNLIGANDED HIV-1 LM/HT CLADE A/E CRF01 GP120 CORE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HIV-1 LM/HT Clade A/E CRF01 gp120 core
著者Tolbert, W.D, Sherburn, R, Pazgier, M.
登録日2019-10-29
公開日2020-10-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The HIV-1 Env gp120 Inner Domain Shapes the Phe43 Cavity and the CD4 Binding Site.
Mbio, 11, 2020
6I9S
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BU of 6i9s by Molmil
hRobo2 Extracellular Domains 2-3
分子名称: Roundabout homolog 2, SODIUM ION
著者Barak, R, Isupov, N.M, Opatowsky, Y.
登録日2018-11-25
公開日2019-03-13
最終更新日2019-04-17
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural Principles in Robo Activation and Auto-inhibition.
Cell, 177, 2019
8A8Q
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Crystal structure of Protein Scalloped in complex with YAP peptide
分子名称: ACETATE ION, Isoform 7 of Transcriptional coactivator YAP1, Protein scalloped
著者Scheufler, C, Villard, F.
登録日2022-06-23
公開日2022-12-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.465 Å)
主引用文献N-terminal beta-strand in YAP is critical for stronger binding to scalloped relative to TEAD transcription factor.
Protein Sci., 32, 2023
6ZOO
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BU of 6zoo by Molmil
Photosystem I reduced Plastocyanin Complex
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, ...
著者Nelson, N, Caspy, I, Shkolnisky, Y.
登録日2020-07-07
公開日2021-06-16
最終更新日2021-07-07
実験手法ELECTRON MICROSCOPY (2.74 Å)
主引用文献Structure of plant photosystem I-plastocyanin complex reveals strong hydrophobic interactions.
Biochem.J., 478, 2021
6S1C
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BU of 6s1c by Molmil
P3221 crystal form of the Ctf18-1-8/Pol2(1-528) complex
分子名称: Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, DNA polymerase epsilon catalytic subunit A, ...
著者Grabarczyk, D.B.
登録日2019-06-18
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (6.1 Å)
主引用文献Ctf18-RFC and DNA Pol ε form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication.
Nucleic Acids Res., 48, 2020
8FYH
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BU of 8fyh by Molmil
G4 RNA-mediated PRC2 dimer
分子名称: G4 RNA, Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH2, ...
著者Song, J, Kasinath, V.
登録日2023-01-26
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for inactivation of PRC2 by G-quadruplex RNA.
Science, 381, 2023
1TTJ
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BU of 1ttj by Molmil
THREE NEW CRYSTAL STRUCTURES OF POINT MUTATION VARIANTS OF MONOTIM: CONFORMATIONAL FLEXIBILITY OF LOOP-1,LOOP-4 AND LOOP-8
分子名称: PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
著者Radha Kishan, K.V, Wierenga, R.K.
登録日1995-04-20
公開日1995-09-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Three new crystal structures of point mutation variants of monoTIM: conformational flexibility of loop-1, loop-4 and loop-8.
Structure, 3, 1995
8QLP
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BU of 8qlp by Molmil
CryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complex
分子名称: DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*C)-3'), MAGNESIUM ION, RNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3'), ...
著者Finocchio, G, Koopal, B, Potocnik, A, Heijstek, C, Jinek, M, Swarts, D.
登録日2023-09-20
公開日2024-01-31
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Target DNA-dependent activation mechanism of the prokaryotic immune system SPARTA.
Nucleic Acids Res., 52, 2024
8QOH
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BU of 8qoh by Molmil
Crystal structure of the kinetoplastid kinetochore protein KKT14 C-terminal domain from Apiculatamorpha spiralis
分子名称: kinetochore protein KKT14
著者Carter, W, Ballmer, D, Ishii, M, Ludzia, P, Akiyoshi, B.
登録日2023-09-28
公開日2024-01-17
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Kinetoplastid kinetochore proteins KKT14-KKT15 are divergent Bub1/BubR1-Bub3 proteins.
Open Biology, 14, 2024
6S5E
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BU of 6s5e by Molmil
Non-square conformation of KtrA A80P mutant ring with bound ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A
著者Teixeira-Duarte, C.M, Fonseca, F, Morais-Cabral, J.H.
登録日2019-07-01
公開日2020-01-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.893 Å)
主引用文献Activation of a nucleotide-dependent RCK domain requires binding of a cation cofactor to a conserved site.
Elife, 8, 2019
8PLY
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BU of 8ply by Molmil
Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 35.
分子名称: 4-({[(thiophen-2-yl)methyl]amino}methyl)phenol, FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin glutathione reductase
著者Ribeiro, L, Montoya, B.O, Moreira-Filho, J.T, Bowyer, S, Verma, A, Neves, B.J, Owens, R.J, Andrade, C.H, Silva-Jr, F.P, Furnham, N.
登録日2023-06-27
公開日2024-01-31
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Fragment library screening by X-ray crystallography and binding site analysis on thioredoxin glutathione reductase of Schistosoma mansoni.
Sci Rep, 14, 2024
7KAA
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BU of 7kaa by Molmil
NMR solution structures of tirasemtiv drug bound to a fast skeletal troponin C-troponin I complex
分子名称: 6-ethynyl-1-(pentan-3-yl)-1H-imidazo[4,5-b]pyrazin-2-ol, CALCIUM ION, Troponin C, ...
著者Mercier, P, Li, M.X, Hartman, J.J, Sykes, B.D.
登録日2020-09-30
公開日2021-03-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Basis of Tirasemtiv Activation of Fast Skeletal Muscle.
J.Med.Chem., 64, 2021
8QLO
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BU of 8qlo by Molmil
CryoEM structure of the apo SPARTA (BabAgo/TIR-APAZ) complex
分子名称: Short prokaryotic Argonaute, Toll/interleukin-1 receptor domain-containing protein
著者Finocchio, G, Koopal, B, Potocnik, A, Heijstek, C, Jinek, M, Swarts, D.
登録日2023-09-20
公開日2024-01-31
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Target DNA-dependent activation mechanism of the prokaryotic immune system SPARTA.
Nucleic Acids Res., 52, 2024
6USW
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BU of 6usw by Molmil
CRYSTAL STRUCTURE OF HIV-1 LM/HS CLADE A/E CRF01 GP120 CORE IN COMPLEX WITH (S)-MCG-IV-210
分子名称: (3S)-N~1~-(2-aminoethyl)-N~3~-(4-chloro-3-fluorophenyl)piperidine-1,3-dicarboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Tolbert, W.D, Sherburn, R, Pazgier, M.
登録日2019-10-28
公開日2020-10-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The HIV-1 Env gp120 Inner Domain Shapes the Phe43 Cavity and the CD4 Binding Site.
Mbio, 11, 2020
8PM0
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BU of 8pm0 by Molmil
Influenza A/H7N9 polymerase in replicase-like conformation in pre-initiation state with Pol II pS5 CTD peptide mimic bound in site 1A/2A
分子名称: 51-mer vRNA loop (v51_mut_S), MAGNESIUM ION, Polymerase acidic protein, ...
著者Arragain, B, Cusack, S.
登録日2023-06-27
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The host RNA polymerase II C-terminal domain is the anchor for replication of the influenza virus genome.
Nat Commun, 15, 2024
8QMF
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BU of 8qmf by Molmil
Transketolase from Vibrio vulnificus in complex with thiamin pyrophosphate
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, NICKEL (II) ION, ...
著者Ballut, L, Georges, R.N, Octobre, G, Charmantray, F, Doumeche, B.
登録日2023-09-22
公開日2024-02-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural determination and kinetic analysis of the transketolase from Vibrio vulnificus reveal unexpected cooperative behavior.
Protein Sci., 33, 2024
6AM0
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BU of 6am0 by Molmil
Crystal structure of K. lactis Edc1-Dcp1-Dcp2-Edc3 decapping complex with synthetic cap substrate analog
分子名称: KLLA0A01474p, KLLA0A11308p, KLLA0E01827p, ...
著者Mugridge, J.S, Gross, J.D.
登録日2017-08-08
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Structure of the activated Edc1-Dcp1-Dcp2-Edc3 mRNA decapping complex with substrate analog poised for catalysis.
Nat Commun, 9, 2018
5LFR
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BU of 5lfr by Molmil
Crystal structure of glycosylated Myelin-associated glycoprotein (MAG) Ig1-3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Myelin-associated glycoprotein, ...
著者Pronker, M.F, Janssen, B.J.C.
登録日2016-07-04
公開日2016-12-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structural basis of myelin-associated glycoprotein adhesion and signalling.
Nat Commun, 7, 2016
6UPF
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BU of 6upf by Molmil
Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure
分子名称: 2-PHOSPHOGLYCOLIC ACID, GLYCEROL, Triosephosphate isomerase
著者Romero, J.M.
登録日2019-10-17
公開日2020-07-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure.
Arch.Biochem.Biophys., 689, 2020
5LIE
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BU of 5lie by Molmil
Crystal structure of Mycobacterium tuberculosis CYP126A1 in complex with imidazole
分子名称: IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450 126
著者Levy, C, Munro, A.W, Leys, D.
登録日2016-07-14
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.799 Å)
主引用文献Structural Characterization and Ligand/Inhibitor Identification Provide Functional Insights into the Mycobacterium tuberculosis Cytochrome P450 CYP126A1.
J. Biol. Chem., 292, 2017

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件を2024-07-17に公開中

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