PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

---

6PB4	The E. coli class-II CAP-dependent transcription activation complex with de novo RNA transcript at the state 2 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Liu, B, Shi, W. 登録日 2019-06-13 公開日 2020-03-18 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.35 Å) 主引用文献 Visualization of two architectures in class-II CAP-dependent transcription activation Plos Biol., 18, 2020
8HVR	Cryo-EM structure of AfsR-dependent transcription activation complex with afsS promoter 分子名称: DNA (65-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Wang, Y, Zheng, J. 登録日 2022-12-27 公開日 2023-12-27 最終更新日 2024-04-03 実験手法 ELECTRON MICROSCOPY (3.35 Å) 主引用文献 Structural and functional characterization of AfsR, an SARP family transcriptional activator of antibiotic biosynthesis in Streptomyces. Plos Biol., 22, 2024
8C1P	Active state homomeric GluA1 AMPA receptor in complex with TARP gamma 3 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CYCLOTHIAZIDE, ... 著者 Zhang, D, Ivica, J, Krieger, J.M, Ho, H, Yamashita, K, Cais, O, Greger, I. 登録日 2022-12-21 公開日 2023-08-30 最終更新日 2023-10-11 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural mobility tunes signalling of the GluA1 AMPA glutamate receptor. Nature, 621, 2023
8IFG	Cryo-EM structure of the Clr6S (Clr6-HDAC) complex from S. pombe 分子名称: Chromatin modification-related protein eaf3, Cph1, Cph2, ... 著者 Zhang, H.Q, Wang, X, Wang, Y.N, Liu, S.M, Zhang, Y, Xu, K, Ji, L.T, Kornberg, R.D. 登録日 2023-02-17 公開日 2024-01-03 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Class I histone deacetylase complex: Structure and functional correlates. Proc Natl Acad Sci U S A, 120, 2023
6OZK	Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after 68h soak in Ca2+ 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DNA/RNA (5'-R(P*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*AP*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3'), ... 著者 Samara, N.L, Yang, W. 登録日 2019-05-15 公開日 2019-09-04 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.104 Å) 主引用文献 Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
8I58	Uroporphyrin I (UPI)-bound CfbA 分子名称: 3-[(1Z,9Z)-3,8,13,18-tetrakis(2-hydroxy-2-oxoethyl)-7,12,17-tris(3-hydroxy-3-oxopropyl)-21,23-dihydroporphyrin-2-yl]propanoic acid, Sirohydrochlorin cobaltochelatase 著者 Ogawa, S, Fujishiro, T. 登録日 2023-01-24 公開日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.09 Å) 主引用文献 Substrate selectivity of CfbA To be published
6P78	queuine lyase from Clostridium spiroforme bound to SAM and queuine 分子名称: 2-amino-5-({[(1S,4S,5S)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, IRON/SULFUR CLUSTER, Queuine lyase, ... 著者 Almo, S.C, Grove, T.L. 登録日 2019-06-05 公開日 2019-09-18 最終更新日 2019-12-18 実験手法 X-RAY DIFFRACTION (1.726 Å) 主引用文献 Discovery of novel bacterial queuine salvage enzymes and pathways in human pathogens. Proc.Natl.Acad.Sci.USA, 116, 2019
6P8V	Structure of E. coli MS115-1 HORMA:CdnC:Trip13 complex 分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATPase, AAA family, ... 著者 Ye, Q, Corbett, K.D. 登録日 2019-06-08 公開日 2019-12-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 HORMA Domain Proteins and a Trip13-like ATPase Regulate Bacterial cGAS-like Enzymes to Mediate Bacteriophage Immunity. Mol.Cell, 77, 2020
6P22	Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC 分子名称: 9-OCTADECENOIC ACID, CHIMERA OF CENTRAL SPIKE PROTEINS GP5 FROM PHAGE T4 AND PVC8 FROM PVC, MAGNESIUM ION, ... 著者 Buth, S.A, Shneider, M.M, Leiman, P.G. 登録日 2019-05-20 公開日 2020-05-27 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.291 Å) 主引用文献 Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC To Be Published
6P2A	Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment 分子名称: 9-OCTADECENOIC ACID, CHIMERA OF BACTERIOPHAGE OBP GP146 AND A T4 GP5, FE (II) ION, ... 著者 Buth, S.A, Shneider, M.M, Leiman, P.G. 登録日 2019-05-21 公開日 2020-05-27 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment To Be Published
8C2S	Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 1). 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Yin, Z, Bridges, H.R, Agip, A.N.A, Hirst, J. 登録日 2022-12-22 公開日 2023-12-20 最終更新日 2024-01-31 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural insights into respiratory complex I deficiency and assembly from the mitochondrial disease-related ndufs4 -/- mouse. Embo J., 43, 2024
6PB5	The E. coli class-II CAP-dependent transcription activation complex at the state 1 architecture 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Liu, B, Shi, W. 登録日 2019-06-13 公開日 2020-03-18 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.52 Å) 主引用文献 Visualization of two architectures in class-II CAP-dependent transcription activation Plos Biol., 18, 2020
8COI	Human adenovirus-derived synthetic ADDobody binder 分子名称: ADDobody 著者 Buzas, D, Toelzer, C, Gupta, K, Berger-Schaffitzel, C, Berger, I. 登録日 2023-02-28 公開日 2023-12-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.17 Å) 主引用文献 Engineering the ADDobody protein scaffold for generation of high-avidity ADDomer super-binders. Structure, 32, 2024
6PCV	Single Particle Reconstruction of Phosphatidylinositol (3,4,5) trisphosphate-dependent Rac exchanger 1 bound to G protein beta gamma subunits 分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Phosphatidylinositol (3,4,5) trisphosphate-dependent Rac exchanger 1 著者 Cash, J.N, Cianfrocco, M.A, Tesmer, J.J.G. 登録日 2019-06-18 公開日 2019-10-23 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-electron microscopy structure and analysis of the P-Rex1-G beta gamma signaling scaffold. Sci Adv, 5, 2019
8C1L	Crystal structure of HNF4 alpha LBD in complexes with palmitic acid and GRIP-1 peptide 分子名称: 1,2-ETHANEDIOL, Hepatocyte nuclear factor 4-alpha, Nuclear receptor coactivator 2, ... 著者 Ni, X, Merk, D, Zhubi, R, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2022-12-20 公開日 2024-01-10 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of HNF4 alpha LBD in complexes with palmitic acid and GRIP-1 peptide To Be Published
6PQV	E. coli ATP Synthase State 1e 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Stewart, A.G, Sobti, M, Walshe, J.L. 登録日 2019-07-10 公開日 2020-06-03 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch. Nat Commun, 11, 2020
8IOG	Cryo-EM structure of porcine bc1 complex in isolated state 分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Complex III subunit 9, ... 著者 Wang, Y.X, Dong, J.Q, Yang, G.F. 登録日 2023-03-11 公開日 2024-04-17 実験手法 ELECTRON MICROSCOPY (2.88 Å) 主引用文献 Cryo-EM structure of porcine bc1 complex in isolated state To Be Published
6PGV	Human Josephin-2 in complex with ubiquitin 分子名称: ETHANAMINE, Josephin-2, Polyubiquitin-B 著者 Grasty, K.C, Weeks, S.D, Loll, P.J. 登録日 2019-06-24 公開日 2019-10-23 最終更新日 2019-12-18 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural insights into the activity and regulation of human Josephin-2 J.Struct.Biol., 3, 2019
8IXB	GMPCPP-Alpha1A/Beta2A-microtubule decorated with kinesin seam region 分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-1 heavy chain, ... 著者 Zheng, W, Zhao, Q.Y, Diao, L, Bao, L, Cong, Y. 登録日 2023-03-31 公開日 2023-08-16 最終更新日 2023-10-25 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Cryo-EM of alpha-tubulin isotype-containing microtubules revealed a contracted structure of alpha 4A/ beta 2A microtubules. Acta Biochim.Biophys.Sin., 55, 2023
8IXG	GMPCPP-Alpha4A/Beta2A-microtubule decorated with kinesin seam region 分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-1 heavy chain, ... 著者 Zheng, W, Zhao, Q.Y, Diao, L, Bao, L, Cong, Y. 登録日 2023-03-31 公開日 2023-08-16 最終更新日 2023-10-25 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Cryo-EM of alpha-tubulin isotype-containing microtubules revealed a contracted structure of alpha 4A/ beta 2A microtubules. Acta Biochim.Biophys.Sin., 55, 2023
8IXA	GMPCPP-Alpha1A/Beta2A-microtubule decorated with kinesin non-seam region 分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-1 heavy chain, ... 著者 Zheng, W, Zhao, Q.Y, Diao, L, Bao, L, Cong, Y. 登録日 2023-03-31 公開日 2023-08-16 最終更新日 2023-10-25 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Cryo-EM of alpha-tubulin isotype-containing microtubules revealed a contracted structure of alpha 4A/ beta 2A microtubules. Acta Biochim.Biophys.Sin., 55, 2023
8IXD	GMPCPP-Alpha1C/Beta2A-microtubule decorated with kinesin non-seam region 分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-1 heavy chain, ... 著者 Zheng, W, Zhao, Q.Y, Diao, L, Bao, L, Cong, Y. 登録日 2023-03-31 公開日 2023-08-16 最終更新日 2023-10-25 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Cryo-EM of alpha-tubulin isotype-containing microtubules revealed a contracted structure of alpha 4A/ beta 2A microtubules. Acta Biochim.Biophys.Sin., 55, 2023
8C8H	Cryo EM structure of the vaccinia complete RNA polymerase complex lacking the capping enzyme 分子名称: Core protein E11, DNA-directed RNA polymerase 133 kDa polypeptide, DNA-directed RNA polymerase 147 kDa polypeptide, ... 著者 Grimm, G, Bartuli, J, Fischer, U. 登録日 2023-01-20 公開日 2024-01-31 実験手法 ELECTRON MICROSCOPY (3.84 Å) 主引用文献 Cryo EM structure of the vaccinia complete RNA polymerase complex lacking the capping enzyme To Be Published
8C58	CpG specific M.MpeI methyltransferase crystallized in the presence of 5-hydroxycytosine and 5-methylcytosine containing dsDNA 分子名称: CARBONATE ION, Cytosine-specific methyltransferase, DNA (5'-D(*CP*CP*AP*CP*AP*TP*GP*(5OC)P*GP*CP*TP*GP*AP*A)-3'), ... 著者 Wojciechowski, M, Czapinska, H, Krwawicz, J, Rafalski, D, Bochtler, M. 登録日 2023-01-06 公開日 2024-01-17 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Cytosine analogues as DNA methyltransferase substrates. Nucleic Acids Res., 2024
8C59	CpG specific M.MpeI methyltransferase crystallized in the presence of 5-bromocytosine (converted to 5mC) and 5-methylcytosine containing dsDNA 分子名称: CARBONATE ION, CITRIC ACID, Cytosine-specific methyltransferase, ... 著者 Wojciechowski, M, Czapinska, H, Krwawicz, J, Rafalski, D, Bochtler, M. 登録日 2023-01-06 公開日 2024-01-17 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Cytosine analogues as DNA methyltransferase substrates. Nucleic Acids Res., 2024

<744745746747748749750751752753754755756757758759>