Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8EDI
DownloadVisualize
BU of 8edi by Molmil
Structure of C. elegans UNC-5 IG 1+2 Domains bound to Heparin dp4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Netrin receptor unc-5
著者Priest, J.M, Ozkan, E.
登録日2022-09-04
公開日2023-01-11
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structural insights into the formation of repulsive netrin guidance complexes.
Sci Adv, 10, 2024
7N02
DownloadVisualize
BU of 7n02 by Molmil
X-ray crystallographic structure model of Lactococcus lactis prolidase mutant D36S
分子名称: Aminopeptidase P family protein, MANGANESE (II) ION
著者Xu, S, Grochulski, P, Tanaka, T.
登録日2021-05-24
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystallographic structure of recombinant Lactococcus lactis prolidase to support proposed structure-function relationships.
Biochim Biophys Acta Proteins Proteom, 1865, 2017
8CW7
DownloadVisualize
BU of 8cw7 by Molmil
200us Temperature-Jump (Dark2) XFEL structure of Lysozyme
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Wolff, A.M, Thompson, M.C, Fraser, J.S, Nango, E.
登録日2022-05-18
公開日2022-06-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography.
Nat.Chem., 15, 2023
8DFP
DownloadVisualize
BU of 8dfp by Molmil
Ectodomain of full-length KIT(DupA502,Y503)-SCF dimers
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Isoform 2 of Mast/stem cell growth factor receptor Kit, ...
著者Bertoletti, N, Krimmer, S.G, Mi, W, Schlessinger, J.
登録日2022-06-22
公開日2023-03-29
最終更新日2023-04-05
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Cryo-EM analyses of KIT and oncogenic mutants reveal structural oncogenic plasticity and a target for therapeutic intervention.
Proc.Natl.Acad.Sci.USA, 120, 2023
8D43
DownloadVisualize
BU of 8d43 by Molmil
Cryo-EM structure of human Kidney Glucosidase II
分子名称: CALCIUM ION, Glucosidase 2 subunit beta, Neutral alpha-glucosidase AB, ...
著者Lyu, M, Yu, E.W.
登録日2022-06-01
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Cryo-EM structure of human Kidney Glucosidase II
To Be Published
8DKP
DownloadVisualize
BU of 8dkp by Molmil
Minimal PutA proline dehydrogenase domain (design #2) complexed with S-(-)-tetrahydro-2-furoic acid
分子名称: Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, TETRAHYDROFURAN-2-CARBOXYLIC ACID
著者Tanner, J.J, Bogner, A.N.
登録日2022-07-05
公開日2022-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Structure-based engineering of minimal proline dehydrogenase domains for inhibitor discovery.
Protein Eng.Des.Sel., 35, 2022
8CSG
DownloadVisualize
BU of 8csg by Molmil
Human PRMT5:MEP50 structure with Fragment 1 and MTA Bound
分子名称: 1,2-ETHANEDIOL, 5'-DEOXY-5'-METHYLTHIOADENOSINE, 6-bromo-1H-pyrrolo[3,2-b]pyridin-5-amine, ...
著者Gunn, R.J, Lawson, J.D, Smith, C.R.
登録日2022-05-12
公開日2022-10-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Fragment optimization and elaboration strategies - the discovery of two lead series of PRMT5/MTA inhibitors from five fragment hits.
Rsc Med Chem, 13, 2022
8E4C
DownloadVisualize
BU of 8e4c by Molmil
IgM BCR fab truncated form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, B-cell antigen receptor complex-associated protein alpha chain,Yellow fluorescent protein, B-cell antigen receptor complex-associated protein beta chain, ...
著者Dong, Y, Pi, X, Wu, H, Reth, M.
登録日2022-08-18
公開日2022-11-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural principles of B cell antigen receptor assembly.
Nature, 612, 2022
8DCH
DownloadVisualize
BU of 8dch by Molmil
Crystal Structure of a highly resistant HIV-1 protease Clinical isolate PR10x with GRL-0519 (tris-tetrahydrofuran as P2 ligand)
分子名称: (3R,3aS,3bR,6aS,7aS)-octahydrodifuro[2,3-b:3',2'-d]furan-3-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}propyl]carbamate, CHLORIDE ION, GLYCEROL, ...
著者Wong-Sam, A.E, Wang, Y.-F, Weber, I.T.
登録日2022-06-16
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献HIV-1 protease with 10 lopinavir and darunavir resistance mutations exhibits altered inhibition, structural rearrangements and extreme dynamics.
J.Mol.Graph.Model., 117, 2022
8D82
DownloadVisualize
BU of 8d82 by Molmil
Cryo-EM structure of human IL-6 signaling complex in detergent: model containing full extracellular domains
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-6, ...
著者Zhou, Y, Franklin, M.C.
登録日2022-06-07
公開日2023-03-29
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Structural insights into the assembly of gp130 family cytokine signaling complexes.
Sci Adv, 9, 2023
8CGP
DownloadVisualize
BU of 8cgp by Molmil
Insulin regulated aminopeptidase (IRAP) in complex with an allosteric aryl sulfonamide inhibitor
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Mpakali, A, Stratikos, E, Giastas, P.
登録日2023-02-06
公開日2024-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Mechanisms of Allosteric Inhibition of Insulin-Regulated Aminopeptidase.
J.Mol.Biol., 436, 2024
8CZU
DownloadVisualize
BU of 8czu by Molmil
Structure of MERS 3CL protease in complex with the cyclopropane based inhibitor 16d
分子名称: 3C-like proteinase, [(1~{S},2~{S})-2-(cyclohexylmethyl)cyclopropyl]methyl ~{N}-[(2~{S})-1-[[(2~{S})-1-[bis(oxidanyl)-oxidanylidene-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{R})-2-oxidanylidene-3,4-dihydropyrrol-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate
著者Liu, L, Lovell, S, Battaile, K.P, Nguyen, H.N, Chamandi, S.D, Picard, H.R, Madden, T.K, Thruman, H.A, Kim, Y, Groutas, W.C, Chang, K.O.
登録日2022-05-25
公開日2022-06-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Broad-Spectrum Cyclopropane-Based Inhibitors of Coronavirus 3C-like Proteases: Biochemical, Structural, and Virological Studies.
Acs Pharmacol Transl Sci, 6, 2023
8CW2
DownloadVisualize
BU of 8cw2 by Molmil
Crystal structure of TDP1 complexed with compound XZ760
分子名称: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-({(4R)-7-phenyl-2-[4-(2-{[4-(pyridin-2-yl)phenyl]methoxy}ethyl)phenyl]imidazo[1,2-a]pyridin-3-yl}amino)benzene-1,2-dicarboxylic acid, ...
著者Lountos, G.T, Zhao, X.Z, Wang, W, Kiselev, E, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R.
登録日2022-05-18
公開日2023-04-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.811 Å)
主引用文献Identification of multidentate tyrosyl-DNA phosphodiesterase 1 (TDP1) inhibitors that simultaneously access the DNA, protein and catalytic-binding sites by oxime diversification.
Rsc Chem Biol, 4, 2023
8E2S
DownloadVisualize
BU of 8e2s by Molmil
Crystal structure of TadAC-1.19
分子名称: ZINC ION, tRNA-specific adenosine deaminase 1.19
著者Feliciano, P.R, Lee, S.J, Ciaramella, G.
登録日2022-08-15
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Improved cytosine base editors generated from TadA variants.
Nat.Biotechnol., 41, 2023
8CVU
DownloadVisualize
BU of 8cvu by Molmil
20ns Temperature-Jump (Light) XFEL structure of Lysozyme
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Wolff, A.M, Thompson, M.C, Fraser, J.S, Nango, E.
登録日2022-05-18
公開日2022-06-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography.
Nat.Chem., 15, 2023
8B87
DownloadVisualize
BU of 8b87 by Molmil
Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
分子名称: AMMONIUM ION, DI(HYDROXYETHYL)ETHER, Protein E6, ...
著者Stewart, B.Z, Kvansakul, M.
登録日2022-10-04
公開日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
To Be Published
8C0R
DownloadVisualize
BU of 8c0r by Molmil
Crystal structure of human carbonic anhydrase II in complex with a coumarin derivative.
分子名称: Carbonic anhydrase 2, ZINC ION, bis(fluoranyl)-(4-methyl-2-oxidanylidene-chromen-7-yl)methanesulfonamide
著者Alterio, V, De Simone, G, Esposito, D.
登録日2022-12-19
公開日2023-03-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献A Combined in Silico and Structural Study Opens New Perspectives on Aliphatic Sulfonamides, a Still Poorly Investigated Class of CA Inhibitors.
Biology (Basel), 12, 2023
8CW6
DownloadVisualize
BU of 8cw6 by Molmil
200us Temperature-Jump (Dark1) XFEL structure of Lysozyme
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Wolff, A.M, Thompson, M.C, Fraser, J.S, Nango, E.
登録日2022-05-18
公開日2022-06-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography.
Nat.Chem., 15, 2023
8D32
DownloadVisualize
BU of 8d32 by Molmil
Mycobacterium tuberculosis pduO-type ATP:cobalamin adenosyltransferase bound to 5-deoxyadenosylrhodibalamin and PPPi
分子名称: 5'-DEOXYADENOSINE, Corrinoid adenosyltransferase, MAGNESIUM ION, ...
著者Mascarenhas, R.N, Ruetz, M, Koutmos, M, Banerjee, R.
登録日2022-05-31
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A noble substitution leads to the cofactor mimicry by rhodibalamin
To Be Published
8DHA
DownloadVisualize
BU of 8dha by Molmil
Leptin-bound leptin receptor complex- focused interaction
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Leptin, Leptin receptor
著者Saxton, R.A, Caveney, N.A, Garcia, K.C.
登録日2022-06-25
公開日2023-04-19
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural insights into the mechanism of leptin receptor activation.
Nat Commun, 14, 2023
8DJW
DownloadVisualize
BU of 8djw by Molmil
Cytosolic ascorbate peroxidase from Sorghum bicolor - hydroperoxo complex
分子名称: L-ascorbate peroxidase, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Zhang, B, Kang, C.
登録日2022-07-01
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A sorghum ascorbate peroxidase with four binding sites has activity against ascorbate and phenylpropanoids.
Plant Physiol., 192, 2023
8DYB
DownloadVisualize
BU of 8dyb by Molmil
The crystal structure of the T252A mutant of CYP199A4 bound to 4-methylthiobenzoic acid
分子名称: 4-methylsulfanylbenzoic acid, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Coleman, T, Bell, S.G.
登録日2022-08-03
公開日2023-01-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Investigating the Active Oxidants Involved in Cytochrome P450 Catalyzed Sulfoxidation Reactions.
Chemistry, 28, 2022
8D4O
DownloadVisualize
BU of 8d4o by Molmil
Crystal Structure of the Neutrophil Serine Protease Inhibitor Eap1 from S. aureus
分子名称: Extracellular Adherence Protein, SODIUM ION
著者Gido, C.D, Geisbrecht, B.V.
登録日2022-06-02
公開日2022-12-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Characterization of two distinct neutrophil serine protease-binding modes within a Staphylococcus aureus innate immune evasion protein family.
J.Biol.Chem., 299, 2023
8DYS
DownloadVisualize
BU of 8dys by Molmil
Crystal structure of human Eukaryotic translation initiation factor 2A (eIF2A)
分子名称: 1,2-ETHANEDIOL, Eukaryotic translation initiation factor 2A, GLYCEROL, ...
著者Righetto, G.L, Zeng, H, Dong, A, Li, Y, Hutchinson, A, Seitova, A, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2022-08-05
公開日2022-08-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of human Eukaryotic translation initiation factor 2A (eIF2A)
To Be Published
8CW8
DownloadVisualize
BU of 8cw8 by Molmil
Laser Off Temperature-Jump XFEL structure of Lysozyme
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Wolff, A.M, Thompson, M.C, Fraser, J.S, Nango, E.
登録日2022-05-18
公開日2022-06-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography.
Nat.Chem., 15, 2023

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon