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8FQE
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LBD conformation 2 (LBDconf2) of GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma2, with 10mM CaCl2, 140mM NMDG, 330uM CTZ, and 100mM L-glutamate (Open-Ca10)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-06
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FQD
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BU of 8fqd by Molmil
LBD conformation 1 (LBDconf1) of GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma2, with 10mM CaCl2, 140mM NMDG, 330uM CTZ, and 100mM L-glutamate (Open-Ca10)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-06
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FPK
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LBD conformation 1 of GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 10mM CaCl2, 150mM NaCl, 1mM MgCl2, 330uM CTZ, and 100uM CNQX (Closed-CaNaMg)
分子名称: 6-(aminomethyl)-7-nitro-1,4-dihydroquinoxaline-2,3-dione, CYCLOTHIAZIDE, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-04
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FQG
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BU of 8fqg by Molmil
LBD conformation 1 (LBDconf1) of GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 150mM NaCl, 330uM CTZ, and 100mM glutamate (Open-Na260)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-06
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FQH
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BU of 8fqh by Molmil
LBD conformation 2 (LBDconf2) of GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 150mM NaCl, 330uM CTZ, and 100mM glutamate (Open-Na260)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-06
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FPY
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BU of 8fpy by Molmil
LBD conformation 2 (LBDconf2) of GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 500mM NaCl, 330uM CTZ, and 100mM glutamate (Open-Na610)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-05
公開日2024-03-06
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FQ2
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BU of 8fq2 by Molmil
LBD conformation 1 (LBDconf1) of GluA2 flip Q isoform N619K mutant of AMPA receptor in complex with gain-of-function TARP gamma-2, with 10mM CaCl2, 150mM NaCl, 1mM MgCl2, 330uM CTZ, and 100mM glutamate (Open-CaNaMg/N619K)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-05
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FPV
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BU of 8fpv by Molmil
LBD conformation 1 (LBDconf1) of GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 500mM NaCl, 330uM CTZ, and 100mM glutamate (Open-Na610)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-05
公開日2024-03-06
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FPZ
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BU of 8fpz by Molmil
LBD conformation 3 (LBDconf3) of GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 500mM NaCl, 330uM CTZ, and 100mM glutamate (Open-Na610)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-05
公開日2024-03-06
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FQA
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BU of 8fqa by Molmil
LBD conformation 2 (LBDconf2) of GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma2, with 140mM NMDG, 330uM CTZ, and 100mM L-glutamate (Open-Na110)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-05
公開日2024-03-06
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FQ6
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BU of 8fq6 by Molmil
LBD of GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma2, with 150mM CaCl2, 330uM CTZ, and 100mM L-glutamate (Open-Ca150)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-05
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FCG
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BU of 8fcg by Molmil
Cryo-EM structure of Chikungunya virus asymmetric unit
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Capsid protein, E1 glycoprotein, ...
著者Su, G.C, Chmielewsk, D, Kaelber, J, Pintilie, G, Chen, M, Jin, J, Auguste, A, Chiu, W.
登録日2022-12-01
公開日2024-03-20
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Cryogenic electron microscopy and tomography reveal imperfect icosahedral symmetry in alphaviruses.
Pnas Nexus, 3, 2024
8FR0
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BU of 8fr0 by Molmil
LBD conformation 3 (LBDconf3) of GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 150mM NaCl, 330uM CTZ, and 100mM glutamate (Open-Na260)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-06
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FQ3
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BU of 8fq3 by Molmil
LBD conformation 2 (LBDconf2) of GluA2 flip Q isoform N619K mutant of AMPA receptor in complex with gain-of-function TARP gamma-2, with 10mM CaCl2, 150mM NaCl, 1mM MgCl2, 330uM CTZ, and 100mM glutamate (Open-CaNaMg/N619K)
分子名称: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamate receptor 2
著者Nakagawa, T.
登録日2023-01-05
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8WA5
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BU of 8wa5 by Molmil
Cryo-EM structure of the gastric proton pump Y799W/E936Q mutant in K+-occluded (K+)E2-AlF state
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K.
登録日2023-09-07
公開日2023-11-29
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Specific protonation of acidic residues confers K + selectivity to the gastric proton pump.
J.Biol.Chem., 300, 2023
8VJK
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BU of 8vjk by Molmil
Structure of mouse RyR1 (high-Ca2+/CFF/ATP dataset)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, ...
著者Weninger, G, Marks, A.R.
登録日2024-01-07
公開日2024-01-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Structural insights into the regulation of RyR1 by S100A1.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VJJ
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BU of 8vjj by Molmil
Structure of mouse RyR1 (EGTA-only dataset)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ...
著者Weninger, G, Marks, A.R.
登録日2024-01-07
公開日2024-01-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.53 Å)
主引用文献Structural insights into the regulation of RyR1 by S100A1.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VK4
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BU of 8vk4 by Molmil
Structure of mouse RyR1 in complex with S100A1 (high-Ca2+/CFF/ATP dataset)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, ...
著者Weninger, G, Marks, A.R.
登録日2024-01-08
公開日2024-02-07
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Structural insights into the regulation of RyR1 by S100A1.
Proc.Natl.Acad.Sci.USA, 121, 2024
8GW8
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BU of 8gw8 by Molmil
the human PTH1 receptor bound to an intracellular biased agonist
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Isoform Gnas-2 of Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Kobayashi, K, Kusakizako, T, Okamoto, H.H, Nureki, O.
登録日2022-09-16
公開日2023-06-14
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Class B1 GPCR activation by an intracellular agonist.
Nature, 618, 2023
8U43
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TRPV1 in nanodisc bound with PIP2-Br4
分子名称: (2S)-2-[(9,10-dibromooctadecanoyl)oxy]-3-{[(S)-hydroxy{[(1R,2R,3S,4R,5R,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propyl (9R,10S)-9,10-dibromooctadecanoate, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, SODIUM ION, ...
著者Arnold, W.R, Julius, D, Cheng, Y.
登録日2023-09-08
公開日2024-05-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural basis of TRPV1 modulation by endogenous bioactive lipids.
Nat.Struct.Mol.Biol., 2024
8XMN
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BU of 8xmn by Molmil
Voltage-gated sodium channel Nav1.7 variant M2
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Wu, Q, Huang, G.
登録日2023-12-27
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XMO
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BU of 8xmo by Molmil
Voltage-gated sodium channel Nav1.7 variant M4
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Wu, Q, Huang, G.
登録日2023-12-27
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8B2T
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BU of 8b2t by Molmil
SARS-CoV-2 Main Protease (Mpro) in complex with nirmatrelvir alkyne
分子名称: 3C-like proteinase nsp5, Nirmatrelvir (reacted form)
著者Owen, C.D, Crawshaw, A.D, Warren, A.J, Trincao, J, Zhao, Y, Brewitz, L, Malla, T.R, Salah, E, Petra, L, Strain-Damerell, C, Schofield, C.J, Walsh, M.A.
登録日2022-09-14
公開日2023-02-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.893 Å)
主引用文献Alkyne Derivatives of SARS-CoV-2 Main Protease Inhibitors Including Nirmatrelvir Inhibit by Reacting Covalently with the Nucleophilic Cysteine.
J.Med.Chem., 66, 2023
8AAA
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BU of 8aaa by Molmil
Crystal structure of SARS-CoV-2 S RBD in complex with a stapled peptide
分子名称: 1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one, Spike protein S1, Stapled peptide
著者Brear, P, Chen, L, Gaynor, K, Harman, M, Dods, R, Hyvonen, M.
登録日2022-06-30
公開日2023-06-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Multivalent bicyclic peptides are an effective antiviral modality that can potently inhibit SARS-CoV-2.
Nat Commun, 14, 2023
8AYO
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Open state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-61432059
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 5-[2-(4-fluorophenyl)-7-(4-oxidanylpiperidin-1-yl)pyrazolo[1,5-c]pyrimidin-3-yl]-1,3-dihydroindol-2-one, ...
著者Zhang, D, Lape, R, Shaikh, S, Kohegyi, B, Watson, J.F, Cais, O, Nakagawa, T, Greger, I.H.
登録日2022-09-02
公開日2023-04-19
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Modulatory mechanisms of TARP gamma 8-selective AMPA receptor therapeutics.
Nat Commun, 14, 2023

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件を2024-08-14に公開中

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