PDB: 31171 件ウェブページステータス検索Chemie searchBIRD

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5KCI	Crystal Structure of HTC1 分子名称: GLYCEROL, SULFATE ION, Uncharacterized protein YPL067C, ... 著者 Martin, R.M, Horowitz, S, Koepnick, B, Cooper, S, Flatten, J, Rogawski, D.S, Koropatkin, N.M, Beinlich, F.R.M, Players, F, Students, U.M, Popovic, Z, Baker, D, Khatib, F, Bardwell, J.C.A. 登録日 2016-06-06 公開日 2016-09-21 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.833 Å) 主引用文献 Determining crystal structures through crowdsourcing and coursework. Nat Commun, 7, 2016
6NBT	CRISPR Complex Subunit Csm3 from Staphylococcus epidermidis RP62a 分子名称: CALCIUM ION, CRISPR-associated protein, SAMARIUM (III) ION 著者 Dorsey, B.W, Mondragon, A. 登録日 2018-12-10 公開日 2019-02-13 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural organization of a Type III-A CRISPR effector subcomplex determined by X-ray crystallography and cryo-EM. Nucleic Acids Res., 47, 2019
7UJ5	Crystal structure of glutamate racemase from Helicobacter pylori in complex with D-glutamate 分子名称: D-GLUTAMIC ACID, GLYCEROL, Glutamate racemase 著者 Cooling, G.T, Spies, M.A. 登録日 2022-03-30 公開日 2023-04-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structure of glutamate racemase from Helicobacter pylori in complex with D-glutamate To Be Published
7P41	Crystal Structure of human mARC1 A165T Variant 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Mitochondrial amidoxime-reducing component 1,Endolysin,Mitochondrial amidoxime-reducing component 1, ... 著者 Struwe, M.A, Scheidig, A.J. 登録日 2021-07-09 公開日 2021-08-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Letter to the editor: The clinically relevant MTARC1 p.Ala165Thr variant impacts neither the fold nor active site architecture of the human mARC1 protein. Hepatol Commun, 6, 2022
8OIC	Trichomonas vaginalis riboside hydrolase (His-tagged) 分子名称: BICINE, CALCIUM ION, Inosine-uridine preferring nucleoside hydrolase family protein 著者 Patrone, M, Stockman, B.J, Degano, M. 登録日 2023-03-22 公開日 2023-08-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A riboside hydrolase that salvages both nucleobases and nicotinamide in the auxotrophic parasite Trichomonas vaginalis. J.Biol.Chem., 299, 2023
6NC4	FtsY-NG high-resolution 分子名称: ACETATE ION, AMMONIUM ION, GLYCEROL, ... 著者 Ataide, S.F, Faoro, C. 登録日 2018-12-10 公開日 2019-10-23 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural insights into the G-loop dynamics of E. coli FtsY NG domain. J.Struct.Biol., 208, 2019
7QFA	Monoclinic crystal structure of PTG CBM21 in complex with beta-cyclodextrin 分子名称: Cycloheptakis-(1-4)-(alpha-D-glucopyranose), GLYCEROL, Protein phosphatase 1 regulatory subunit 3C 著者 Semrau, M.S, Storici, P, Lolli, G. 登録日 2021-12-05 公開日 2022-11-02 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular architecture of the glycogen- committed PP1/PTG holoenzyme. Nat Commun, 13, 2022
6NCH	Crystal structure of CDP-Chase: Raster data collection 分子名称: D-ribose, PHOSPHATE ION, Phosphohydrolase (MutT/nudix family protein), ... 著者 Miller, M.S, Shi, W, Gabelli, S.B. 登録日 2018-12-11 公開日 2019-02-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Getting the Most Out of Your Crystals: Data Collection at the New High-Flux, Microfocus MX Beamlines at NSLS-II. Molecules, 24, 2019
7OVW	Binding domain of botulinum neurotoxin E in complex with GD1a 分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Neurotoxin type E 著者 Masuyer, G, Stenmark, P. 登録日 2021-06-15 公開日 2021-08-11 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Mechanism of Ganglioside Receptor Recognition by Botulinum Neurotoxin Serotype E. Int J Mol Sci, 22, 2021
8CMB	Human Leukocyte Antigen class II allotype DR1 presenting SARS-CoV-2 Spike peptide S486-505 分子名称: 1,2-ETHANEDIOL, 2-AMINO-ETHANETHIOL, HLA class II histocompatibility antigen, ... 著者 MacLachlan, B.J, Mason, G.H, Godkin, A.J, Rizkallah, P.J. 登録日 2023-02-19 公開日 2023-07-26 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Structural definition of HLA class II-presented SARS-CoV-2 epitopes reveals a mechanism to escape pre-existing CD4 + T cell immunity. Cell Rep, 42, 2023
8ONE	Crystal Structure of full-length Human Lysyl Hydroxylase LH3 - Asp190Ser mutant - Cocrystal with Fe2+, Mn2+, UDP-Glucose 分子名称: 2-OXOGLUTARIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Mattoteia, D, De Marco, M, Pinnola, A, Faravelli, S, Scietti, L, Forneris, F. 登録日 2023-04-02 公開日 2023-07-19 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Identification of Regulatory Molecular "Hot Spots" for LH/PLOD Collagen Glycosyltransferase Activity. Int J Mol Sci, 24, 2023
5FMR	crIFT52 N-terminal domain 分子名称: INTRAFLAGELLAR TRANSPORT PROTEIN COMPONENT IFT52, SULFATE ION 著者 Mourao, A, Vetter, M, Lorentzen, E. 登録日 2015-11-09 公開日 2016-03-09 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Intraflagellar Transport Proteins 172, 80, 57, 54, 38, and 20 Form a Stable Tubulin-Binding Ift-B2 Complex. Embo J., 35, 2016
7Q6M	Structure of WrbA from Yersinia pseudotuberculosis in P1 分子名称: CHLORIDE ION, NAD(P)H dehydrogenase (quinone) 著者 Gabrielsen, M, Beckham, K.S.H, Roe, A.J. 登録日 2021-11-08 公開日 2022-08-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Crystal structures of WrbA, a spurious target of the salicylidene acylhydrazide inhibitors of type III secretion in Gram-negative pathogens, and verification of improved specificity of next-generation compounds. Microbiology (Reading, Engl.), 168, 2022
5KD1	Sperm whale myoglobin H64A with nitrosoamphetamine 分子名称: GLYCEROL, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Wang, B, Guan, Y, Thomas, L.M, Richter-Addo, G.B. 登録日 2016-06-07 公開日 2017-05-10 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Nitrosoamphetamine binding to myoglobin and hemoglobin: Crystal structure of the H64A myoglobin-nitrosoamphetamine adduct. Nitric Oxide, 67, 2017
8OIB	Trichomonas vaginalis riboside hydrolase in complex with glycerol 分子名称: CALCIUM ION, GLYCEROL, Inosine-uridine preferring nucleoside hydrolase family protein 著者 Patrone, M, Stockman, B.J, Degano, M. 登録日 2023-03-22 公開日 2023-08-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 A riboside hydrolase that salvages both nucleobases and nicotinamide in the auxotrophic parasite Trichomonas vaginalis. J.Biol.Chem., 299, 2023
6NCX	Crystal structure of GH2 beta-galacturonidase from Eisenbergiella tayi bound to galacturonate 分子名称: Beta-galacturonidase, CHLORIDE ION, alpha-D-galactopyranuronic acid 著者 Walton, W.G, Pellock, S.J, Redinbo, M.R. 登録日 2018-12-12 公開日 2019-02-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Selecting a Single Stereocenter: The Molecular Nuances That Differentiate beta-Hexuronidases in the Human Gut Microbiome. Biochemistry, 58, 2019
7QXK	As isolated MSOX movie series dataset 1 (0.4 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) 分子名称: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ... 著者 Rose, S.L, Baba, S, Okumura, H, Antonyuk, S.V, Sasaki, D, Tosha, T, Kumasaka, T, Eady, R.R, Yamamoto, M, Hasnain, S.S. 登録日 2022-01-26 公開日 2022-08-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases. Proc.Natl.Acad.Sci.USA, 119, 2022
5VJQ	Complex between HyHEL10 Fab fragment heavy chain mutant (I29F, S52T, Y53F) and Pekin duck egg lysozyme isoform I (DEL-I) 分子名称: CHLORIDE ION, GLYCEROL, HyHEL10 heavy chain Fab fragment carrying three mutations; I29F, ... 著者 Langley, D.B, Christ, D. 登録日 2017-04-19 公開日 2018-04-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Germinal center antibody mutation trajectories are determined by rapid self/foreign discrimination. Science, 360, 2018
7QYC	As isolated MSOX movie series dataset 20 (8 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) 分子名称: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ... 著者 Rose, S.L, Baba, S, Okumura, H, Antonyuk, S.V, Sasaki, D, Tosha, T, Kumasaka, T, Eady, R.R, Yamamoto, M, Hasnain, S.S. 登録日 2022-01-27 公開日 2022-08-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases. Proc.Natl.Acad.Sci.USA, 119, 2022
8P5P	Structure of TECPR1 N-terminal DysF domain 分子名称: GLYCEROL, Tectonin beta-propeller repeat-containing protein 1 著者 Boyle, K.B, Elliott, P.R, Randow, F. 登録日 2023-05-24 公開日 2023-07-19 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 TECPR1 conjugates LC3 to damaged endomembranes upon detection of sphingomyelin exposure. Embo J., 42, 2023
5KDR	The crystal structure of carboxyltransferase from Staphylococcus Aureus bound to the antimicrobial agent moiramide B. 分子名称: 1,2-ETHANEDIOL, Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, ... 著者 Silvers, M.A, Pakhomova, S, Neau, D, Silvers, W.C, Anzalone, N, Taylor, C.M, Waldrop, G.L. 登録日 2016-06-08 公開日 2016-08-10 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of Carboxyltransferase from Staphylococcus aureus Bound to the Antibacterial Agent Moiramide B. Biochemistry, 55, 2016
6NPU	C-abl Kinase domain with the activator(cmpd29), N-(1-(3,4-dichlorophenyl)-4,5-dihydro-1H-pyrazol-3-yl)acetamide 分子名称: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, GLYCEROL, NONAETHYLENE GLYCOL, ... 著者 Campobasso, N. 登録日 2019-01-18 公開日 2019-03-13 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Identification and Optimization of Novel Small c-Abl Kinase Activators Using Fragment and HTS Methodologies. J. Med. Chem., 62, 2019
8D54	anti HIV gp120/CD4 complex antibody CG10 Fab 分子名称: CG10 Fab heavy chain, CG10 Fab light chain 著者 Yang, Z, Bjorkman, P.J. 登録日 2022-06-03 公開日 2022-12-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Antibody Recognition of CD4-Induced Open HIV-1 Env Trimers. J.Virol., 96, 2022
5FV8	Structure of cJun-FosW coiled coil complex. 分子名称: CJUN, FOSW, GLYCEROL, ... 著者 Zaccai, N.R, Mason, J.M, Brady, R.L. 登録日 2016-02-03 公開日 2017-06-07 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Helix-Constrained Fos-Based Peptides Inhibit Oncogenic Activator Protein-1 and Cancer Cell Proliferation To be Published
5VMN	Crystal structure of grouper iridovirus GIV66 分子名称: 1,2-ETHANEDIOL, Bak protein, NITRATE ION 著者 Banjara, S, Kvansakul, M. 登録日 2017-04-27 公開日 2018-03-07 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Grouper iridovirus GIV66 is a Bcl-2 protein that inhibits apoptosis by exclusively sequestering Bim. J. Biol. Chem., 293, 2018

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