PDB: 909 件ウェブページステータス検索Chemie searchBIRD

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3UCU	The c-di-GMP-I riboswitch bound to pGpG 分子名称: MAGNESIUM ION, RNA (92-MER), U1 small nuclear ribonucleoprotein A, ... 著者 Smith, K.D, Strobel, S.A. 登録日 2011-10-27 公開日 2012-01-04 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer. Biochemistry, 51, 2012
3UWT	Crystal structure of a RNA binding domain of poly-U binding splicing factor 60KDa (PUF60) from Homo sapiens at 2.50 A resolution 分子名称: CHLORIDE ION, Poly(U)-binding-splicing factor PUF60 著者 Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL) 登録日 2011-12-02 公開日 2012-01-11 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of a RNA binding domain of poly-U binding splicing factor 60KDa (PUF60) from Homo sapiens at 2.50 A resolution To be published
1O0P	Solution Structure of the third RNA Recognition Motif (RRM) of U2AF65 in complex with an N-terminal SF1 peptide 分子名称: Splicing Factor SF1, Splicing factor U2AF 65 kDa subunit 著者 Selenko, P, Gregorovic, G, Sprangers, R, Stier, G, Rhani, Z, Kramer, A, Sattler, M. 登録日 2003-02-24 公開日 2003-05-06 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural Basis for the molecular recognition between human splicing factors U2AF65 and SF1/mBBP Mol.Cell, 11, 2003
1FJE	SOLUTION STRUCTURE OF NUCLEOLIN RBD12 IN COMPLEX WITH SNRE RNA 分子名称: NUCLEOLIN RBD12, SNRE RNA 著者 Allain, F.H.T, Bouvet, P, Dieckmann, T, Feigon, J. 登録日 2000-08-08 公開日 2001-01-03 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin. EMBO J., 19, 2000
1FJ7	SOLUTION STRUCTURE OF NUCLEOLIN RBD1 分子名称: NUCLEOLIN RBD1 著者 Allain, F.H.-T, Gilbert, D.E, Bouvet, P, Feigon, J. 登録日 2000-08-07 公開日 2000-10-16 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target. J.Mol.Biol., 303, 2000
1FJC	SOLUTION STRUCTURE OF NUCLEOLIN RBD2 分子名称: NUCLEOLIN RBD2 著者 Allain, F.H.-T, Gilbert, D.E, Bouvet, P, Feigon, J. 登録日 2000-08-07 公開日 2000-10-16 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target. J.Mol.Biol., 303, 2000
3VAL	Structure of U2AF65 variant with BrU5C1 DNA 分子名称: 1,4-DIETHYLENE DIOXIDE, DNA (5'-D(*C*UP*UP*UP*(BRU)P*UP*U)-3'), SULFATE ION, ... 著者 Jenkins, J.L, Frato, K.H, Kielkopf, C.L. 登録日 2011-12-29 公開日 2013-02-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 U2AF65 adapts to diverse pre-mRNA splice sites through conformational selection of specific and promiscuous RNA recognition motifs. Nucleic Acids Res., 41, 2013
3EGZ	Crystal structure of an in vitro evolved tetracycline aptamer and artificial riboswitch 分子名称: 7-CHLOROTETRACYCLINE, MAGNESIUM ION, Tetracycline aptamer and artificial riboswitch, ... 著者 Xiao, H, Edwards, T.E, Ferre-D'Amare, A.R. 登録日 2008-09-11 公開日 2008-10-28 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for specific, high-affinity tetracycline binding by an in vitro evolved aptamer and artificial riboswitch Chem.Biol., 15, 2008
1FHT	RNA-BINDING DOMAIN OF THE U1A SPLICEOSOMAL PROTEIN U1A117, NMR, 43 STRUCTURES 分子名称: U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A 著者 Allain, F.H.-T, Gubser, C.C, Howe, P.W.A, Nagai, K, Neuhaus, D, Varani, G. 登録日 1996-02-21 公開日 1996-07-11 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the N-terminal RNP domain of U1A protein: the role of C-terminal residues in structure stability and RNA binding. J.Mol.Biol., 257, 1996
3VAK	Structure of U2AF65 variant with BrU5 DNA 分子名称: 1,4-DIETHYLENE DIOXIDE, DNA (5'-D(*UP*UP*UP*UP*(BRU)P*UP*U)-3'), GLYCEROL, ... 著者 Jenkins, J.L, Kielkopf, C.L. 登録日 2011-12-29 公開日 2013-02-13 最終更新日 2017-08-16 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 U2AF65 adapts to diverse pre-mRNA splice sites through conformational selection of specific and promiscuous RNA recognition motifs. Nucleic Acids Res., 41, 2013
1G2E	CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE TUMOR NECROSIS FACTOR ALPHA RNA 分子名称: 5'-R(P*UP*AP*UP*UP*UP*AP*UP*UP*UP*A)-3', PARANEOPLASTIC ENCEPHALOMYELITIS ANTIGEN HUD 著者 Wang, X, Hall, T.M.T. 登録日 2000-10-18 公開日 2001-02-05 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for recognition of AU-rich element RNA by the HuD protein. Nat.Struct.Biol., 8, 2001
1PGZ	Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) 分子名称: 5'-D(*T*TP*AP*GP*GP*GP*TP*TP*AP*GP*(6MI)P*G)-3', Heterogeneous nuclear ribonucleoprotein A1 著者 Myers, J.C, Moore, S.A, Shamoo, Y. 登録日 2003-05-28 公開日 2003-11-11 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure-based incorporation of 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine into the human telomeric repeat DNA as a probe for UP1 binding and destabilization of G-tetrad structures J.Biol.Chem., 278, 2003
3VAF	Structure of U2AF65 variant with BrU3 DNA 分子名称: 1,4-DIETHYLENE DIOXIDE, DNA 5'-D(*UP*UP*(BRU)P*(BRU)P*UP*UP*U)-3', GLYCEROL, ... 著者 Jenkins, J.L, Kielkopf, C.L. 登録日 2011-12-29 公開日 2013-02-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 U2AF65 adapts to diverse pre-mRNA splice sites through conformational selection of specific and promiscuous RNA recognition motifs. Nucleic Acids Res., 41, 2013
3VAM	Structure of U2AF65 variant with BrU5C2 DNA 分子名称: 1,4-DIETHYLENE DIOXIDE, DNA (5'-D(*UP*CP*UP*UP*(BRU)P*UP*U)-3'), GLYCEROL, ... 著者 Jenkins, J.L, Kielkopf, C.L. 登録日 2011-12-29 公開日 2013-02-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 U2AF65 adapts to diverse pre-mRNA splice sites through conformational selection of specific and promiscuous RNA recognition motifs. Nucleic Acids Res., 41, 2013
6M75	C-Myc DNA binding protein complex 分子名称: DNA (5'-D(*TP*CP*TP*TP*AP*TP*T)-3'), RNA-binding motif, single-stranded-interacting protein 1, ... 著者 Aggarwal, P, Bhavesh, N.S. 登録日 2020-03-17 公開日 2021-03-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.57 Å) 主引用文献 Hinge like domain motion facilitates human RBMS1 protein binding to proto-oncogene c-myc promoter. Nucleic Acids Res., 49, 2021
3VAJ	Structure of U2AF65 variant with BrU5C6 DNA 分子名称: 1,4-DIETHYLENE DIOXIDE, DNA (5'-D(*UP*UP*UP*UP*(BRU)P*CP*U)-3'), GLYCEROL, ... 著者 Jenkins, J.L, Kielkopf, C.L. 登録日 2011-12-29 公開日 2013-02-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 U2AF65 adapts to diverse pre-mRNA splice sites through conformational selection of specific and promiscuous RNA recognition motifs. Nucleic Acids Res., 41, 2013
3EGN	C-terminal RNA Recognition Motif of the U11/U12 65K Protein 分子名称: RNA-binding protein 40 著者 Netter, C, Wahl, M.C. 登録日 2008-09-11 公開日 2009-06-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Functional stabilization of an RNA recognition motif by a noncanonical N-terminal expansion Rna, 15, 2009
3VAI	Structure of U2AF65 variant with BrU3C5 DNA 分子名称: 1,4-DIETHYLENE DIOXIDE, DNA 5'-D(*UP*UP*(BRU)P*UP*CP*UP*U)-3', GLYCEROL, ... 著者 Jenkins, J.L, Frato, K.H, Kielkopf, C.L. 登録日 2011-12-29 公開日 2013-02-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 U2AF65 adapts to diverse pre-mRNA splice sites through conformational selection of specific and promiscuous RNA recognition motifs. Nucleic Acids Res., 41, 2013
1FXL	CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE C-FOS RNA 分子名称: 5'-R(P*UP*UP*UP*UP*AP*UP*UP*UP*U)-3', PARANEOPLASTIC ENCEPHALOMYELITIS ANTIGEN HUD 著者 Wang, X, Hall, T.M.T. 登録日 2000-09-26 公開日 2001-02-05 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis for recognition of AU-rich element RNA by the HuD protein. Nat.Struct.Biol., 8, 2001
6N3D	Structure of HIV Tat-specific factor 1 U2AF Homology Motif (APO-State) 分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Loerch, S, Jenkins, J.L, Kielkopf, C.L. 登録日 2018-11-15 公開日 2019-01-02 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.13 Å) 主引用文献 The pre-mRNA splicing and transcription factor Tat-SF1 is a functional partner of the spliceosome SF3b1 subunit via a U2AF homology motif interface. J. Biol. Chem., 294, 2019
6NSX	Yeast Hsh155 Ligand bound to Human Tat-SF1 Motif 分子名称: CHLORIDE ION, HIV Tat-specific factor 1, Hsh155 著者 Jenkins, J.L, Leach, J.R, Kielkopf, C.L. 登録日 2019-01-25 公開日 2019-06-05 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Cus2 enforces the first ATP-dependent step of splicing by binding to yeast SF3b1 through a UHM-ULM interaction. Rna, 25, 2019
1HD0	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0 (HNRNP D0 RBD1), NMR 分子名称: PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0) 著者 Nagata, T, Kurihara, Y, Matsuda, G, Saeki, J, Kohno, T, Yanagida, Y, Ishikawa, F, Uesugi, S, Katahira, M. 登録日 1999-05-18 公開日 2000-05-18 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Structure and interactions with RNA of the N-terminal UUAG-specific RNA-binding domain of hnRNP D0. J.Mol.Biol., 287, 1999
6NTY	2.1 A resolution structure of the Musashi-2 (Msi2) RNA recognition motif 1 (RRM1) domain 分子名称: PHOSPHATE ION, RNA-binding protein Musashi homolog 2 著者 Lovell, S, Kashipathy, M.M, Battaile, K.P, Lan, L, Xiaoqing, W, Cooper, A, Gao, F.P, Xu, L. 登録日 2019-01-30 公開日 2019-10-23 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal and solution structures of human oncoprotein Musashi-2 N-terminal RNA recognition motif 1. Proteins, 88, 2020
1OPI	SOLUTION STRUCTURE OF THE THIRD RNA RECOGNITION MOTIF (RRM) OF U2AF65 IN COMPLEX WITH AN N-TERMINAL SF1 PEPTIDE 分子名称: SPLICING FACTOR SF1, SPLICING FACTOR U2AF 65 KDA SUBUNIT 著者 Selenko, P, Gregorovic, G, Sprangers, R, Stier, G, Rhani, Z, Kramer, A, Sattler, M. 登録日 2003-03-05 公開日 2004-03-16 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural basis for the molecular recognition between human splicing factors U2AF65 and SF1/mBBP Mol.Cell, 11, 2003
6NWW	Crystal structure of the RRM domain of S. pombe Puf1 in the P212121 space group 分子名称: CHLORIDE ION, Pumilio domain-containing protein C56F2.08c 著者 Qiu, C, Hall, T.M.T. 登録日 2019-02-07 公開日 2019-07-03 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity. Nucleic Acids Res., 47, 2019

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