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8OJ7
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BU of 8oj7 by Molmil
HSV-1 DNA polymerase-processivity factor complex in halted elongation state
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (53-MER), DNA (67-MER), ...
著者Gustavsson, E, Grunewald, K, Elias, P, Hallberg, B.M.
登録日2023-03-24
公開日2024-04-03
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.46 Å)
主引用文献Dynamics of the Herpes simplex virus DNA polymerase holoenzyme during DNA synthesis and proof-reading revealed by Cryo-EM.
Nucleic Acids Res., 52, 2024
5MZP
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BU of 5mzp by Molmil
Crystal structure of stabilized A2A adenosine receptor A2AR-StaR2-bRIL in complex with caffeine at 2.1A resolution
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, CAFFEINE, ...
著者Cheng, K.Y.R, Segala, E, Robertson, N, Deflorian, F, Dore, A.S, Errey, J.C, Fiez-Vandal, C, Marshall, F.H, Cooke, R.M.
登録日2017-02-01
公開日2017-07-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of Human A1 and A2A Adenosine Receptors with Xanthines Reveal Determinants of Selectivity.
Structure, 25, 2017
8QMO
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BU of 8qmo by Molmil
Cryo-EM structure of the benzo[a]pyrene-bound Hsp90-XAP2-AHR complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, AH receptor-interacting protein, Aryl hydrocarbon receptor, ...
著者Kwong, H.S, Grandvuillemin, L, Sirounian, S, Ancelin, A, Lai-Kee-Him, J, Carivenc, C, Lancey, C, Ragan, T.J, Hesketh, E.L, Bourguet, W, Gruszczyk, J.
登録日2023-09-24
公開日2024-01-10
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Structural Insights into the Activation of Human Aryl Hydrocarbon Receptor by the Environmental Contaminant Benzo[a]pyrene and Structurally Related Compounds.
J.Mol.Biol., 436, 2024
3MCU
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BU of 3mcu by Molmil
Crystal structure of the dipicolinate synthase chain B from Bacillus cereus. Northeast Structural Genomics Consortium Target BcR215.
分子名称: Dipicolinate synthase, B chain, PHOSPHATE ION
著者Vorobiev, S, Lew, S, Abashidze, M, Seetharaman, J, Wang, H, Ciccosanti, C, Foote, E.L, Mao, L, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2010-03-29
公開日2010-04-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Crystal structure of the dipicolinate synthase chain B from Bacillus cereus.
To be Published
5MZX
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BU of 5mzx by Molmil
Crystal structure of the decarboxylase AibA/AibB in complex with 4'-diphospho pantetheine
分子名称: 4'-diphospho pantetheine, ACETATE ION, GLYCEROL, ...
著者Bock, T, Luxenburger, E, Hoffmann, J, Schuetza, V, Feiler, C, Mueller, R, Blankenfeldt, W.
登録日2017-02-02
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献AibA/AibB Induces an Intramolecular Decarboxylation in Isovalerate Biosynthesis by Myxococcus xanthus.
Angew. Chem. Int. Ed. Engl., 56, 2017
2PPC
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BU of 2ppc by Molmil
Oxidized wild type AfNiR exposed to NO (nitrite bound)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
著者Tocheva, E.I, Murphy, M.E.P.
登録日2007-04-28
公開日2008-04-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Stable copper-nitrosyl formation by nitrite reductase in either oxidation state.
Biochemistry, 46, 2007
1GOG
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BU of 1gog by Molmil
NOVEL THIOETHER BOND REVEALED BY A 1.7 ANGSTROMS CRYSTAL STRUCTURE OF GALACTOSE OXIDASE
分子名称: COPPER (II) ION, GALACTOSE OXIDASE, SODIUM ION
著者Ito, N, Phillips, S.E.V, Knowles, P.F.
登録日1993-09-30
公開日1994-01-31
最終更新日2023-07-26
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Novel thioether bond revealed by a 1.7 A crystal structure of galactose oxidase.
Nature, 350, 1991
8ASJ
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BU of 8asj by Molmil
Four subunit cytochrome b-c1 complex from Rhodobacter sphaeroides in native nanodiscs - focussed refinement in the b-c conformation
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Cytochrome b, Cytochrome b-c1 subunit IV, ...
著者Swainsbury, D.J.K, Hawkings, F.R, Martin, E.C, Musial, S, Salisbury, J.H, Jackson, P.J, Farmer, D.A, Johnson, M.P, Siebert, C.A, Hitchcock, A, Hunter, C.N.
登録日2022-08-19
公開日2023-03-15
最終更新日2023-03-22
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Cryo-EM structure of the four-subunit Rhodobacter sphaeroides cytochrome bc 1 complex in styrene maleic acid nanodiscs.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ASI
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BU of 8asi by Molmil
Four subunit cytochrome b-c1 complex from Rhodobacter sphaeroides in native nanodiscs - consensus refinement in the b-b conformation
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Cytochrome b, Cytochrome b-c1 subunit IV, ...
著者Swainsbury, D.J.K, Hawkings, F.R, Martin, E.C, Musial, S, Salisbury, J.H, Jackson, P.J, Farmer, D.A, Johnson, M.P, Siebert, C.A, Hitchcock, A, Hunter, C.N.
登録日2022-08-19
公開日2023-03-15
最終更新日2023-03-22
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-EM structure of the four-subunit Rhodobacter sphaeroides cytochrome bc 1 complex in styrene maleic acid nanodiscs.
Proc.Natl.Acad.Sci.USA, 120, 2023
8OJC
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BU of 8ojc by Molmil
HSV-1 DNA polymerase active site in alternative exonuclease state
分子名称: CALCIUM ION, DNA (47-MER), DNA polymerase catalytic subunit
著者Gustavsson, E, Grunewald, K, Elias, P, Hallberg, B.M.
登録日2023-03-24
公開日2024-04-03
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.08 Å)
主引用文献Dynamics of the Herpes simplex virus DNA polymerase holoenzyme during DNA synthesis and proof-reading revealed by Cryo-EM.
Nucleic Acids Res., 52, 2024
8OJA
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BU of 8oja by Molmil
HSV-1 DNA polymerase-processivity factor complex in exonuclease state
分子名称: CALCIUM ION, DNA (47-MER), DNA (68-MER), ...
著者Gustavsson, E, Grunewald, K, Elias, P, Hallberg, B.M.
登録日2023-03-24
公開日2024-04-03
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (1.87 Å)
主引用文献Dynamics of the Herpes simplex virus DNA polymerase holoenzyme during DNA synthesis and proof-reading revealed by Cryo-EM.
Nucleic Acids Res., 52, 2024
5N75
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BU of 5n75 by Molmil
14-3-3 sigma in complex with TAZ pS89 peptide
分子名称: 14-3-3 protein sigma, CHLORIDE ION, MAGNESIUM ION, ...
著者Sijbesma, E, Leysen, S, Ottmann, C.
登録日2017-02-19
公開日2017-07-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Identification of Two Secondary Ligand Binding Sites in 14-3-3 Proteins Using Fragment Screening.
Biochemistry, 56, 2017
8R6Q
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BU of 8r6q by Molmil
Co-crystal structure of PD-L1 with low molecular weight inhibitor
分子名称: (3~{R})-1-[[4-[2-chloranyl-3-(2,3-dihydro-1,4-benzodioxin-6-yl)phenyl]-2-methoxy-phenyl]methyl]-~{N}-(2-hydroxyethyl)pyrrolidine-3-carboxamide, CHLORIDE ION, Programmed cell death 1 ligand 1, ...
著者Plewka, J, Surmiak, E, Magiera-Mularz, K, Kalinowska-Tluscik, J.
登録日2023-11-22
公開日2024-01-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Solubilizer Tag Effect on PD-L1/Inhibitor Binding Properties for m -Terphenyl Derivatives.
Acs Med.Chem.Lett., 15, 2024
7P7P
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BU of 7p7p by Molmil
Crystal structure of ERAP2 aminopeptidase in complex with phosphinic pseudotripeptide((1R)-1-Amino-3-phenylpropyl){(2S)-3-[((2S)-1-amino-1-oxo-3-phenylpropan-2-yl)amino]-2-{[3-(2-hydroxyphenyl)-isoxazol-5-yl]methyl}-3-oxopropyl}phosphinic acid
分子名称: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Giastas, P, Stratikos, E, Mpakali, A.
登録日2021-07-20
公開日2022-01-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Inhibitor-Dependent Usage of the S1' Specificity Pocket of ER Aminopeptidase 2.
Acs Med.Chem.Lett., 13, 2022
1UXP
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BU of 1uxp by Molmil
Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax
分子名称: ADENOSINE MONOPHOSPHATE, GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Lorentzen, E, Hensel, R, Pohl, E.
登録日2004-02-27
公開日2004-08-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural Basis of Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde 3-Phosphate Dehydrogenase from Thermoproteus Tenax
J.Mol.Biol., 341, 2004
1UM5
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BU of 1um5 by Molmil
Catalytic Antibody 21H3 with alcohol substrate
分子名称: 1-PHENYLETHANOL, Antibody 21H3 H chain, Antibody 21H3 L chain
著者Beuscher IV, A.E, Reuter, J, Olson, A.J, Romesberg, F.E, Schultz, P.G, Wirsching, P, Janda, K.D, Lerner, R.A, Stevens, R.C.
登録日2003-09-23
公開日2004-10-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Studies of an Efficient Catalytic Antibody Operating by Ping-Pong and Induced Fit Mechanisms
To be Published
8OKF
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BU of 8okf by Molmil
WD repeat containing protein 5 (WDR5)- PER2 peptide
分子名称: CHLORIDE ION, Glutathione S-transferase class-mu 26 kDa isozyme,WD repeat domain 5, PENTAETHYLENE GLYCOL, ...
著者Wolf, E, Boergel, A.
登録日2023-03-28
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A structural competition involving WDR5 times circadian oscillations
To Be Published
5N5R
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BU of 5n5r by Molmil
14-3-3 sigma in complex with TAZ pS89 peptide and fragment NV1
分子名称: 14-3-3 protein sigma, 2-azanyl-~{N}-(2,6-dimethylphenyl)-~{N}-propan-2-yl-ethanamide, CHLORIDE ION, ...
著者Sijbesma, E, Leysen, S, Ottmann, C.
登録日2017-02-14
公開日2017-07-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Identification of Two Secondary Ligand Binding Sites in 14-3-3 Proteins Using Fragment Screening.
Biochemistry, 56, 2017
8AE7
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BU of 8ae7 by Molmil
The strucuture of Compound 15 bound to CK2alpha
分子名称: 2-[5,6-bis(bromanyl)-1H-indazol-3-yl]ethanenitrile, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
著者Brear, P, De Fusco, C, Atkinson, E, Frances, N, Iegre, J, Venkitaraman, A, Hyvonen, M, Spring, D.
登録日2022-07-12
公開日2023-03-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献A fragment-based approach leading to the discovery of inhibitors of CK2 alpha with a novel mechanism of action.
Rsc Med Chem, 13, 2022
1ZJF
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BU of 1zjf by Molmil
12mer-spd-P4N
分子名称: 5'-D(*AP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*T)-3', 5'-D(*TP*AP*GP*CP*CP*CP*CP*GP*CP*CP*CP*C)-3'
著者Dohm, J.A, Hsu, M.H, Hwu, J.R, Huang, R.C, Moudrianakis, E.N, Lattman, E.E, Gittis, A.G.
登録日2005-04-28
公開日2005-05-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Influence of Ions, Hydration, and the Transcriptional Inhibitor P4N on the Conformations of the Sp1 Binding Site.
J.Mol.Biol., 349, 2005
5NR9
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BU of 5nr9 by Molmil
A Native Ternary Complex of Alpha-1,3-Galactosyltransferase (alpha-3GalT) Supports a Conserved Reaction Mechanism for Retaining Glycosyltransferases - Unliganded alpha-3GalT
分子名称: GLYCEROL, N-acetyllactosaminide alpha-1,3-galactosyltransferase
著者Albesa-Jove, D, Marina, A, Sainz-Polo, M.A, Guerin, M.E.
登録日2017-04-22
公開日2017-10-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Snapshots of alpha-1,3-Galactosyltransferase with Native Substrates: Insight into the Catalytic Mechanism of Retaining Glycosyltransferases.
Angew. Chem. Int. Ed. Engl., 56, 2017
5D8B
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BU of 5d8b by Molmil
Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Svidritskiy, E, Korostelev, A.A.
登録日2015-08-17
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.63 Å)
主引用文献Ribosome Structure Reveals Preservation of Active Sites in the Presence of a P-Site Wobble Mismatch.
Structure, 23, 2015
6R5M
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BU of 6r5m by Molmil
Crystal structure of toxin MT9 from mamba venom
分子名称: ACETYL GROUP, Dendroaspis polylepis MT9, GLYCEROL, ...
著者Stura, E.A, Tepshi, L, Ciolek, J, Triquigneaux, M, Zoukimian, C, De Waard, M, Beroud, R, Servent, D, Gilles, N, Legrand, P, Ciccone, L.
登録日2019-03-25
公開日2020-02-12
最終更新日2022-05-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献MT9, a natural peptide from black mamba venom antagonizes the muscarinic type 2 receptor and reverses the M2R-agonist-induced relaxation in rat and human arteries
Biomed Pharmacother, 150, 2022
5NRT
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BU of 5nrt by Molmil
Cys-Gly dipeptidase GliJ in complex with Ca2+
分子名称: CALCIUM ION, Dipeptidase gliJ, MAGNESIUM ION
著者Groll, M, Huber, E.M.
登録日2017-04-25
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Gliotoxin Biosynthesis: Structure, Mechanism, and Metal Promiscuity of Carboxypeptidase GliJ.
ACS Chem. Biol., 12, 2017
2PKD
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BU of 2pkd by Molmil
Crystal structure of CD84: Insite into SLAM family function
分子名称: CHLORIDE ION, SLAM family member 5
著者Yan, Q, Malashkevich, V.N, Fedorov, A, Cao, E, Lary, J.W, Cole, J.L, Nathenson, S.G, Almo, S.C.
登録日2007-04-17
公開日2007-06-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.043 Å)
主引用文献Structure of CD84 provides insight into SLAM family function.
Proc.Natl.Acad.Sci.Usa, 104, 2007

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