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7DWC
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Bacteroides thetaiotaomicron VPI5482 BTAxe1
分子名称: Xylanase
著者Wang, L.Y, Wang, Y.L, Xin, F.J, Sun, L.C.
登録日2021-01-17
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.804 Å)
主引用文献Rational Design for Broadened Substrate Specificity and Enhanced Activity of a Novel Acetyl Xylan Esterase from Bacteroides thetaiotaomicron.
J.Agric.Food Chem., 69, 2021
2W72
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DEOXYGENATED STRUCTURE OF A DISTAL SITE HEMOGLOBIN MUTANT PLUS XE
分子名称: HUMAN HEMOGLOBIN A, PHOSPHATE ION, POTASSIUM ION, ...
著者Miele, A.E, Draghi, F, Sciara, G, Johnson, K.A, Renzi, F, Vallone, B, Brunori, M, Savino, C.
登録日2008-12-19
公開日2009-04-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Pattern of Cavities in Globins: The Case of Human Hemoglobin.
Biopolymers, 91, 2009
2VWT
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Crystal structure of YfaU, a metal ion dependent class II aldolase from Escherichia coli K12 - Mg-pyruvate product complex
分子名称: GLYCEROL, MAGNESIUM ION, PHOSPHATE ION, ...
著者Rea, D, Rakus, J.F, Gerlt, J.A, Fulop, V, Bugg, T.D.H, Roper, D.I.
登録日2008-06-26
公開日2008-09-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Crystal Structure and Functional Assignment of Yfau, a Metal Ion Dependent Class II Aldolase from Escherichia Coli K12.
Biochemistry, 47, 2008
7F61
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Crystal structure of human histamine receptor H3R in complex with antagonist PF03654746
分子名称: CHOLESTEROL, Histamine H3 receptor, N-ethyl-3-fluoranyl-3-[3-fluoranyl-4-(pyrrolidin-1-ylmethyl)phenyl]cyclobutane-1-carboxamide, ...
著者Peng, X, Zhang, H.
登録日2021-06-23
公開日2022-10-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for recognition of antihistamine drug by human histamine receptor.
Nat Commun, 13, 2022
7EST
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Interaction of the peptide CF3-LEU-ALA-NH-C6H4-CF3(TFLA) with porcine pancreatic elastase. X-ray studies at 1.8 Angstroms
分子名称: CALCIUM ION, DIMETHYLFORMAMIDE, ELASTASE, ...
著者Li De Lasierra, I, Prange, T.
登録日1990-06-15
公開日1991-10-15
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Interaction of the peptide CF3-Leu-Ala-NH-C6H4-CF3 (TFLA) with porcine pancreatic elastase. X-ray studies at 1.8 A.
J.Mol.Recog., 3, 1990
7FVS
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BU of 7fvs by Molmil
Crystal Structure of S. aureus gyrase in complex with 4-[[1-[(1-chloro-6,7-dihydro-5H-cyclopenta[c]pyridin-6-yl)methyl]azetidin-3-yl]methylamino]-6-fluorochromen-2-one
分子名称: 4-{[(1-{[(6R)-1-chloro-6,7-dihydro-5H-cyclopenta[c]pyridin-6-yl]methyl}azetidin-3-yl)methyl]amino}-6-fluoro-2H-1-benzopyran-2-one, ACETATE ION, CHLORIDE ION, ...
著者Xu, B, Benz, J, Cumming, J.G, Kreis, L, Rudolph, M.G.
登録日2023-04-18
公開日2023-06-28
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Discovery of a Series of Indane-Containing NBTIs with Activity against Multidrug-Resistant Gram-Negative Pathogens.
Acs Med.Chem.Lett., 14, 2023
7FVT
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Crystal Structure of S. aureus gyrase in complex with 6-[5-[2-[(4-chloro-2,3-dihydro-1H-inden-2-yl)methylamino]ethyl]-2-oxo-1,3-oxazolidin-3-yl]-4H-pyrido[3,2-b][1,4]oxazin-3-one
分子名称: 6-{(5R)-5-[2-({[(2R)-4-chloro-2,3-dihydro-1H-inden-2-yl]methyl}amino)ethyl]-2-oxo-1,3-oxazolidin-3-yl}-2H-pyrido[3,2-b][1,4]oxazin-3(4H)-one, CHLORIDE ION, DNA (5'-D(*AP*GP*CP*CP*GP*TP*AP*GP*GP*GP*CP*CP*CP*TP*AP*CP*GP*GP*CP*T)-3'), ...
著者Xu, B, Benz, J, Cumming, J.G, Rudolph, M.G.
登録日2023-04-18
公開日2023-06-28
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.081 Å)
主引用文献Discovery of a Series of Indane-Containing NBTIs with Activity against Multidrug-Resistant Gram-Negative Pathogens.
Acs Med.Chem.Lett., 14, 2023
5DN6
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ATP synthase from Paracoccus denitrificans
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F0 subcomplex C subunit, ...
著者Morales-Rios, E, Montgomery, M.G, Leslie, A.G.W, Walker, J.E.
登録日2015-09-09
公開日2015-10-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.98 Å)
主引用文献Structure of ATP synthase from Paracoccus denitrificans determined by X-ray crystallography at 4.0 angstrom resolution.
Proc.Natl.Acad.Sci.USA, 112, 2015
5DL2
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Crystal Structure of RopB
分子名称: Regulator of protease B (RopB)
著者Kumaraswami, M.
登録日2015-09-04
公開日2016-01-20
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural and functional analysis of RopB: a major virulence regulator in Streptococcus pyogenes.
Mol.Microbiol., 99, 2016
7JPP
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BU of 7jpp by Molmil
ORC-O2WH: Human Origin Recognition Complex (ORC) with dynamic/unresolved ORC1 AAA+ domain
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Origin recognition complex subunit 1, ...
著者Jaremko, M.J, Joshua-Tor, L.
登録日2020-08-09
公開日2020-09-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献The dynamic nature of the human Origin Recognition Complex revealed through five cryoEM structures.
Elife, 9, 2020
7JOQ
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Structure of NV1 small terminase
分子名称: Small Terminase subunit
著者Cingolani, G, Lokareddy, R.
登録日2020-08-07
公開日2020-11-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.95 Å)
主引用文献Biophysical analysis of Pseudomonas-phage PaP3 small terminase suggests a mechanism for sequence-specific DNA-binding by lateral interdigitation.
Nucleic Acids Res., 48, 2020
7JOA
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2:1 cGAS-nucleosome complex
分子名称: Cyclic GMP-AMP synthase, DNA (145-MER), Histone H2A type 1, ...
著者Boyer, J.A, Spangler, C.J, Strauss, J.D, Cesmat, A.P, Liu, P, McGinty, R.K, Zhang, Q.
登録日2020-08-06
公開日2020-09-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of nucleosome-dependent cGAS inhibition.
Science, 370, 2020
7JYT
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hALK in complex with 3-(3-methyl-1H-pyrazol-5-yl)pyridine
分子名称: 3-(3-methyl-1H-pyrazol-5-yl)pyridine, ALK tyrosine kinase receptor, GLYCEROL
著者McGrath, A.P, Zou, H, Lane, W, Saikatendu, K.
登録日2020-08-31
公開日2021-01-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of Novel and Highly Selective Cyclopropane ALK Inhibitors through a Fragment-Assisted, Structure-Based Drug Design.
Acs Omega, 5, 2020
7JZ2
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BU of 7jz2 by Molmil
Succinate: quinone oxidoreductase SQR from E.coli K12
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
著者Lyu, M, Su, C.-C, Morgan, C.E, Bolla, J.R, Robinson, C.V, Yu, E.W.
登録日2020-09-01
公開日2021-01-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
2XSQ
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Crystal structure of human Nudix motif 16 (NUDT16) in complex with IMP and magnesium
分子名称: CHLORIDE ION, INOSINIC ACID, MAGNESIUM ION, ...
著者Tresaugues, L, Welin, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Karlberg, T, Kol, S, Kotenyova, T, Kouznetsova, E, Moche, M, Nyman, T, Persson, C, Schuler, H, Schutz, P, Siponen, M.I, Thorsell, A.G, van den Berg, S, Wahlberg, E, Weigelt, J, Nordlund, P.
登録日2010-09-29
公開日2010-11-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Basis for the Specificity of Human Nudt16 and its Regulation by Inosine Monophosphate.
Plos One, 10, 2015
7K4Y
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Crystal structure of Kemp Eliminase HG3.17 at 343 K
分子名称: Endo-1,4-beta-xylanase
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
2XJM
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Crystal structure of Streptococcus suis Dpr with cobalt
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Haikarainen, T, Thanassoulas, A, Stavros, P, Nounesis, G, Haataja, S, Papageorgiou, A.C.
登録日2010-07-06
公開日2010-11-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and Thermodynamic Characterization of Metal Ion Binding in Streptococcus Suis Dpr.
J.Mol.Biol., 405, 2011
2XJN
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Crystal structure of Streptococcus suis Dpr with copper
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Haikarainen, T, Thanassoulas, A, Stavros, P, Nounesis, G, Haataja, S, Papageorgiou, A.C.
登録日2010-07-06
公開日2010-11-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and Thermodynamic Characterization of Metal Ion Binding in Streptococcus Suis Dpr.
J.Mol.Biol., 405, 2011
2XJO
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Crystal structure of Streptococcus suis Dpr with nickel
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Haikarainen, T, Thanassoulas, A, Stavros, P, Nounesis, G, Haataja, S, Papageorgiou, A.C.
登録日2010-07-06
公開日2010-11-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and Thermodynamic Characterization of Metal Ion Binding in Streptococcus Suis Dpr.
J.Mol.Biol., 405, 2011
2OQR
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BU of 2oqr by Molmil
The structure of the response regulator RegX3 from Mycobacterium tuberculosis
分子名称: ACETATE ION, BETA-MERCAPTOETHANOL, LANTHANUM (III) ION, ...
著者King-Scott, J.
登録日2007-02-01
公開日2007-10-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献The Structure of a Full-length Response Regulator from Mycobacterium tuberculosis in a Stabilized Three-dimensional Domain-swapped, Activated State.
J.Biol.Chem., 282, 2007
3CK4
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A heterospecific leucine zipper tetramer
分子名称: GCN4 leucine zipper, MAGNESIUM ION
著者Liu, J.
登録日2008-03-14
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A heterospecific leucine zipper tetramer.
Chem.Biol., 15, 2008
6LVD
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BU of 6lvd by Molmil
Structure of Dimethylformamidase, tetramer, Y440A mutant
分子名称: N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit
著者Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R.
登録日2020-02-02
公開日2020-06-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.
Angew.Chem.Int.Ed.Engl., 59, 2020
6XTV
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FULL-LENGTH LTTR LYSG FROM CORYNEBACTERIUM GLUTAMICUM WITH BOUND EFFECTOR ARG
分子名称: ARGININE, Lysine export transcriptional regulatory protein LysG
著者Hofmann, E, Syberg, F, Schlicker, C, Eggeling, L, Schendzielorz, G.
登録日2020-01-16
公開日2020-10-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Engineering and application of a biosensor with focused ligand specificity.
Nat Commun, 11, 2020
5I6N
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Crystal Structure of Copper Nitrite Reductase at 100K after 11.73 MGy
分子名称: COPPER (II) ION, Copper-containing nitrite reductase, NITRIC OXIDE, ...
著者Horrell, S, Hough, M.A, Strange, R.W.
登録日2016-02-16
公開日2016-07-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Serial crystallography captures enzyme catalysis in copper nitrite reductase at atomic resolution from one crystal.
Iucrj, 3, 2016
6A6V
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Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans with 7 additional mutations, in complex with FSA
分子名称: 1-S-(carboxymethyl)-1-thio-beta-D-fructopyranose, FLAVIN-ADENINE DINUCLEOTIDE, Fructosyl amine: oxygen oxidoreductase
著者Ogawa, N, Maruyama, Y, Itoh, T, Hashimoto, W, Murata, K.
登録日2018-06-29
公開日2019-05-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Creation of haemoglobin A1c direct oxidase from fructosyl peptide oxidase by combined structure-based site specific mutagenesis and random mutagenesis.
Sci Rep, 9, 2019

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