PDB: 19260 件ウェブページステータス検索Chemie searchBIRD

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3SAB	Crystal structure of wild-type HIV-1 protease in complex with AF78 分子名称: 3-hydroxy-N-[(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](3-phenylpropyl)amino}-1-phenylbutan-2-yl]benzamide, PHOSPHATE ION, Protease 著者 Schiffer, C.A, Nalam, M.N.L. 登録日 2011-06-02 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Protease Inhibitors that protrude out from substrate envelope are more susceptible to developing drug resistance To be Published
3SHL	Crystal structure of Staphylococcal nuclease variant Delta+PHS V74KL25A at cryogenic temperature 分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease 著者 Caro, J.A, Sue, G, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B. 登録日 2011-06-16 公開日 2011-06-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Redirection of internal ionizable residues by engineered cavities To be Published
3SMM	Crystal structure of human 14-3-3 sigma C38N/N166H in complex with task-3 peptide and stabilizer Fusicoccin J aglycone 分子名称: 14-3-3 protein sigma, CHLORIDE ION, Fusicoccin J aglycone, ... 著者 Anders, C, Schumacher, B, Ottmann, C. 登録日 2011-06-28 公開日 2012-07-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A semisynthetic fusicoccane stabilizes a protein-protein interaction and enhances the expression of K+ channels at the cell surface. Chem. Biol., 20, 2013
3SN4	Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 bound to magnesium and alpha-ketoglutarate 分子名称: 2-OXOGLUTARIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Bonanno, J.B, Patskovsky, Y, Toro, R, Dickey, M, Bain, K.T, Wu, B, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2011-06-28 公開日 2011-07-27 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 bound to magnesium and alpha-ketoglutarate To be Published
3SL5	Crystal structure of the catalytic domain of PDE4D2 complexed with compound 10d 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DIMETHYL SULFOXIDE, ... 著者 Feil, S.F. 登録日 2011-06-24 公開日 2011-10-26 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Thiophene inhibitors of PDE4: Crystal structures show a second binding mode at the catalytic domain of PDE4D2. Bioorg.Med.Chem.Lett., 21, 2011
3SEI	Crystal Structure of Caskin1 Tandem SAMs 分子名称: CHLORIDE ION, Caskin-1, SULFATE ION 著者 Stafford, R.L, Bowie, J.U. 登録日 2011-06-10 公開日 2011-12-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Tandem SAM domain structure of human Caskin1: a presynaptic, self-assembling scaffold for CASK. Structure, 19, 2011
3S9L	Complex between transferrin receptor 1 and transferrin with iron in the N-Lobe, cryocooled 2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CARBONATE ION, ... 著者 Eckenroth, B.E, Steere, A.N, Mason, A.B, Everse, S.J. 登録日 2011-06-01 公開日 2011-08-10 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.22 Å) 主引用文献 How the binding of human transferrin primes the transferrin receptor potentiating iron release at endosomal pH. Proc.Natl.Acad.Sci.USA, 108, 2011
3SGY	Staphylococcus aureus Dihydrofolate Reductase complexed with NADPH and 6-ETHYL-5-[(3S)-3-[3-METHOXY-5-(PYRIDIN-4-YL)PHENYL]BUT-1-YN-1-YL]PYRIMIDINE-2,4-DIAMINE (UCP1006) 分子名称: 6-ethyl-5-{(3S)-3-[3-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Frey, K.M, Anderson, A.C. 登録日 2011-06-15 公開日 2012-03-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.598 Å) 主引用文献 Toward New Therapeutics for Skin and Soft Tissue Infections: Propargyl-Linked Antifolates Are Potent Inhibitors of MRSA and Streptococcus pyogenes. Plos One, 7, 2012
3VKR	Assimilatory nitrite reductase (Nii3) - NO2 complex from tobbaco leaf analysed with high X-ray dose 分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, NITRITE ION, ... 著者 Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K. 登録日 2011-11-20 公開日 2012-04-25 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The reductive reaction mechanism of tobacco nitrite reductase derived from a combination of crystal structures and ultraviolet-visible microspectroscopy Proteins, 80, 2012
3V81	Crystal structure of HIV-1 reverse transcriptase (RT) with DNA and the nonnucleoside inhibitor nevirapine 分子名称: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, DNA (5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*(ATM))-3'), DNA (5'-D(*AP*TP*GP*GP*AP*AP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3'), ... 著者 Das, K, Martinez, S.E, Arnold, E. 登録日 2011-12-22 公開日 2012-01-18 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.8503 Å) 主引用文献 HIV-1 reverse transcriptase complex with DNA and nevirapine reveals non-nucleoside inhibition mechanism. Nat.Struct.Mol.Biol., 19, 2012
3VLZ	Assimilatory nitrite reductase (Nii3) - N226K mutant - SO3 full complex from tobacco leaf 分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, Nitrite reductase, ... 著者 Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K. 登録日 2011-12-05 公開日 2012-09-26 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 X-ray crystal structure of a mutant assimilatory nitrite reductase that shows sulfite reductase-like activity Chem.Biodivers., 9, 2012
3V9G	Crystal structure of human 1-pyrroline-5-carboxylate dehydrogenase 分子名称: Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial 著者 Tanner, J.J, Srivastava, D. 登録日 2011-12-27 公開日 2012-05-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The Three-Dimensional Structural Basis of Type II Hyperprolinemia. J.Mol.Biol., 420, 2012
3VAX	Crystal structure of DndA from streptomyces lividans 分子名称: PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein dndA 著者 Zhang, Z, Chen, F, Lin, K, Wu, G. 登録日 2011-12-30 公開日 2013-01-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of the cysteine desulfurase DndA from Streptomyces lividans which is involved in DNA phosphorothioation Plos One, 7, 2012
3VER	Crystal structure of the O-carbamoyltransferase TobZ in complex with carbamoyl adenylate intermediate 分子名称: 5'-O-[(S)-(carbamoyloxy)(hydroxy)phosphoryl]adenosine, FE (II) ION, O-carbamoyltransferase TobZ, ... 著者 Parthier, C, Stubbs, M.T, Goerlich, S, Jaenecke, F. 登録日 2012-01-09 公開日 2012-01-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction. Angew.Chem.Int.Ed.Engl., 51, 2012
3VF8	Crystal Structure of Spleen Tyrosine Kinase Syk Catalytic Domain with Pyrazolylbenzimidazole Inhibitor 416 分子名称: 3-[5-(5-ethoxy-6-fluoro-1H-benzimidazol-2-yl)-1H-pyrazol-4-yl]-1,1-diethylurea, Tyrosine-protein kinase SYK 著者 McLean, L.R, Zhang, Y. 登録日 2012-01-09 公開日 2012-05-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 X-ray crystallographic structure-based design of selective thienopyrazole inhibitors for interleukin-2-inducible tyrosine kinase. Bioorg.Med.Chem.Lett., 22, 2012
3VGK	Crystal structure of a ROK family glucokinase from Streptomyces griseus 分子名称: Glucokinase, SULFATE ION, ZINC ION 著者 Miyazono, K, Tabei, N, Morita, S, Ohnishi, Y, Horinouchi, S, Tanokura, M. 登録日 2011-08-15 公開日 2011-12-07 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Substrate recognition mechanism and substrate-dependent conformational changes of an ROK family glucokinase from Streptomyces griseus J.Bacteriol., 194, 2012
3VKQ	Assimilatory nitrite reductase (Nii3) - NO2 complex from tobbaco leaf analysed with middle X-ray dose 分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, NITRITE ION, ... 著者 Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K. 登録日 2011-11-20 公開日 2012-04-25 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The reductive reaction mechanism of tobacco nitrite reductase derived from a combination of crystal structures and ultraviolet-visible microspectroscopy Proteins, 80, 2012
3VL6	3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 580 MPa 分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ... 著者 Nagae, T, Watanabe, N. 登録日 2011-11-29 公開日 2012-02-29 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase Acta Crystallogr.,Sect.D, 68, 2012
3VNP	Crystal structure of hypothetical protein (GK2848) from Geobacillus Kaustophilus 分子名称: ACETIC ACID, Hypothetical conserved protein, MAGNESIUM ION 著者 Karthe, P.P, Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2012-01-17 公開日 2012-03-07 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of hypothetical protein (GK2848) from Geobacillus Kaustophilus To be Published
3VOP	Structure of Vaccinia virus A27 分子名称: DI(HYDROXYETHYL)ETHER, Protein A27 著者 Chang, T.H, Ko, T.P, Hsieh, F.L, Wang, A.H.J. 登録日 2012-01-31 公開日 2013-03-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of vaccinia viral A27 protein reveals a novel structure critical for its function and complex formation with A26 protein. Plos Pathog., 9, 2013
3VPM	Crystal structure of human ribonucleotide reductase subunit M2 (hRRM2) mutant 分子名称: FE (III) ION, MAGNESIUM ION, Ribonucleoside-diphosphate reductase subunit M2 著者 Chen, X, Xu, Z, Liu, H, Zhang, L, Chen, B, Zhu, L, Yang, C, Zhu, W, Shao, J. 登録日 2012-03-05 公開日 2013-03-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Essential role of E106 in the proton-coupled electron transfer in human ribonucleotide reductase M2 subunit To be Published
3V9R	Crystal structure of Saccharomyces cerevisiae MHF complex 分子名称: SULFATE ION, Uncharacterized protein YDL160C-A, Uncharacterized protein YOL086W-A 著者 Yang, H, Zhang, T, Zhong, C, Li, H, Zhou, J, Ding, J. 登録日 2011-12-28 公開日 2012-02-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Saccharomyces Cerevisiae MHF Complex Structurally Resembles the Histones (H3-H4)(2) Heterotetramer and Functions as a Heterotetramer Structure, 20, 2012
3VQU	CRYSTAL STRUCTURE OF HUMAN MPS1 CATALYTIC DOMAIN IN COMPLEX WITH 4-[(4-amino-5-cyano-6-ethoxypyridin-2- yl)amino]benzamide 分子名称: 4-[(4-amino-5-cyano-6-ethoxypyridin-2-yl)amino]benzamide, Dual specificity protein kinase TTK, IODIDE ION 著者 Kusakabe, K, Ide, N, Daigo, Y, Itoh, T, Higashino, K, Okano, Y, Tadano, G, Tachibana, Y, Sato, Y, Inoue, M, Wada, T, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Tagashira, S, Kido, Y, Sakamoto, S, Yasuo, K, Maeda, M, Yamamoto, T, Higaki, M, Endoh, T, Ueda, K, Shiota, T, Murai, H, Nakamura, Y. 登録日 2012-03-30 公開日 2012-06-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Diaminopyridine-based potent and selective mps1 kinase inhibitors binding to an unusual flipped-Peptide conformation. Acs Med.Chem.Lett., 3, 2012
3VAK	Structure of U2AF65 variant with BrU5 DNA 分子名称: 1,4-DIETHYLENE DIOXIDE, DNA (5'-D(*UP*UP*UP*UP*(BRU)P*UP*U)-3'), GLYCEROL, ... 著者 Jenkins, J.L, Kielkopf, C.L. 登録日 2011-12-29 公開日 2013-02-13 最終更新日 2017-08-16 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 U2AF65 adapts to diverse pre-mRNA splice sites through conformational selection of specific and promiscuous RNA recognition motifs. Nucleic Acids Res., 41, 2013
3VB1	Crystal Structure of Anopholes gambiae odorant binding protein 20 in open state 分子名称: ACETIC ACID, AGAP005208-PA 著者 Ziemba, B.P, Jones, D.N. 登録日 2011-12-30 公開日 2012-10-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A novel mechanism of ligand binding and release in the odorant binding protein 20 from the malaria mosquito Anopheles gambiae. Protein Sci., 22, 2013

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