PDB: 471 件ウェブページステータス検索Chemie searchBIRD

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4V5Q	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome 分子名称: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Schmeing, T.M, Voorhees, R.M, Ramakrishnan, V. 登録日 2010-12-07 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 How Mutations in tRNA Distant from the Anticodon Affect the Fidelity of Decoding. Nat.Struct.Mol.Biol., 18, 2011
4V5G	The crystal structure of the 70S ribosome bound to EF-Tu and tRNA 分子名称: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Schmeing, T.M, Voorhees, R.M, Ramakrishnan, V. 登録日 2009-09-01 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 The crystal structure of the ribosome bound to EF-Tu and aminoacyl-tRNA. Science, 326, 2009
4V9J	70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F. 登録日 2013-04-23 公開日 2014-07-09 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (3.86 Å) 主引用文献 Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation. Science, 340, 2013
2O0F	Docking of the modified RF3 X-ray structure into cryo-EM map of E.coli 70S ribosome bound with RF3 分子名称: Peptide chain release factor 3 著者 Gao, H, Zhou, Z, Rawat, U, Huang, C, Bouakaz, L, Wang, C, Liu, Y, Zavialov, A, Gursky, R, Sanyal, S, Ehrenberg, M, Frank, J, Song, H. 登録日 2006-11-27 公開日 2007-07-24 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (15.5 Å) 主引用文献 RF3 induces ribosomal conformational changes responsible for dissociation of class I release factors Cell(Cambridge,Mass.), 129, 2007
6N0I	2.60 Angstrom Resolution Crystal Structure of Elongation Factor G 2 from Pseudomonas putida. 分子名称: DI(HYDROXYETHYL)ETHER, Elongation factor G 2, SULFATE ION 著者 Minasov, G, Shuvalova, L, Wawrzak, Z, Cardona-Correa, A, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2018-11-07 公開日 2018-11-14 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 2.60 Angstrom Resolution Crystal Structure of Elongation Factor G 2 from Pseudomonas putida. To Be Published
6O85	Electron cryo-microscopy of the eukaryotic translation initiation factor 2B bound to eukaryotic translation initiation factor 2 from Homo sapiens 分子名称: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Eukaryotic translation initiation factor 2 subunit 1, Eukaryotic translation initiation factor 2 subunit 3, ... 著者 Nguyen, H.C, Kenner, L.R, Frost, A.S. 登録日 2019-03-08 公開日 2019-05-15 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.03 Å) 主引用文献 eIF2B-catalyzed nucleotide exchange and phosphoregulation by the integrated stress response. Science, 364, 2019
6O81	Electron cryo-microscopy of the eukaryotic translation initiation factor 2B bound to translation initiation factor 2 from Homo sapiens 分子名称: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Eukaryotic translation initiation factor 2 subunit 1, Eukaryotic translation initiation factor 2 subunit 3, ... 著者 Nguyen, H, Kenner, L, Frost, A. 登録日 2019-03-08 公開日 2019-05-15 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.21 Å) 主引用文献 eIF2B-catalyzed nucleotide exchange and phosphoregulation by the integrated stress response. Science, 364, 2019
6O9K	70S initiation complex 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Frank, J, Gonzalez Jr, R.L, kaledhonkar, S, Fu, Z, Caban, K, Li, W, Chen, B, Sun, M. 登録日 2019-03-14 公開日 2019-05-29 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Late steps in bacterial translation initiation visualized using time-resolved cryo-EM. Nature, 570, 2019
6NOT	Crystal structure of a full length elongation factor G (EF-G) from Rickettsia prowazekii 分子名称: Elongation factor G 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2019-01-16 公開日 2019-01-30 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of a full length elongation factor G (EF-G) from Rickettsia prowazekii To Be Published
7LS1	80S ribosome from mouse bound to eEF2 (Class II) 分子名称: 28S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Loerch, S, Smith, P.R, Kunder, N, Stanowick, A.D, Lou, T.-F, Campbell, Z.T. 登録日 2021-02-17 公開日 2021-11-03 最終更新日 2021-12-08 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Functionally distinct roles for eEF2K in the control of ribosome availability and p-body abundance. Nat Commun, 12, 2021
7NSH	39S mammalian mitochondrial large ribosomal subunit with mtRRF (post) and mtEFG2 分子名称: 16S rRNA, 39S ribosomal protein L48, mitochondrial, ... 著者 Kummer, E, Schubert, K, Ban, N. 登録日 2021-03-07 公開日 2021-05-05 最終更新日 2021-12-15 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis of translation termination, rescue, and recycling in mammalian mitochondria. Mol.Cell, 81, 2021
6LKQ	The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Zhang, L, Wang, Y.H, Lancaster, L, Zhou, J, Noller, H.F. 登録日 2019-12-20 公開日 2020-05-06 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The structural basis for inhibition of ribosomal translocation by viomycin. Proc.Natl.Acad.Sci.USA, 117, 2020
7VMC	Crystal structure of EF-Tu/CdiA/CdiI 分子名称: Contact-dependent inhibitor I, Elongation factor Tu, tRNA nuclease CdiA 著者 Wang, J, Yashiro, Y, Tomita, K. 登録日 2021-10-08 公開日 2022-03-30 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.413 Å) 主引用文献 Mechanistic insights into tRNA cleavage by a contact-dependent growth inhibitor protein and translation factors. Nucleic Acids Res., 50, 2022
7O9K	Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-Tu 分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Valentin Gese, G, Hallberg, B.M. 登録日 2021-04-16 公開日 2021-06-30 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis for late maturation steps of the human mitoribosomal large subunit. Nat Commun, 12, 2021
2P8X	Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDPNP cryo-EM reconstruction 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, Elongation factor Tu-B, ... 著者 Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J. 登録日 2007-03-23 公開日 2007-05-08 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (9.7 Å) 主引用文献 Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation. Embo J., 26, 2007
7W59	The cryo-EM structure of human pre-C*-I complex 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Zhan, X, Lu, Y, Shi, Y. 登録日 2021-11-29 公開日 2022-06-22 最終更新日 2022-08-17 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Mechanism of exon ligation by human spliceosome. Mol.Cell, 82, 2022
7W5A	The cryo-EM structure of human pre-C*-II complex 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Zhan, X, Lu, Y, Shi, Y. 登録日 2021-11-29 公開日 2022-06-22 最終更新日 2022-08-17 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Mechanism of exon ligation by human spliceosome. Mol.Cell, 82, 2022
7W5B	The cryo-EM structure of human C* complex 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Zhan, X, Lu, Y, Shi, Y. 登録日 2021-11-29 公開日 2022-06-22 最終更新日 2022-08-17 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Mechanism of exon ligation by human spliceosome. Mol.Cell, 82, 2022
2P8Y	Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDP:sordarin cryo-EM reconstruction 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J. 登録日 2007-03-23 公開日 2007-05-08 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (11.7 Å) 主引用文献 Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation. Embo J., 26, 2007
2P8Z	Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDPNP:sordarin cryo-EM reconstruction 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, Elongation factor Tu-B, ... 著者 Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J. 登録日 2007-03-23 公開日 2007-05-08 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (8.9 Å) 主引用文献 Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation. Embo J., 26, 2007
2OM7	Structural Basis for Interaction of the Ribosome with the Switch Regions of GTP-bound Elongation Factors 分子名称: 16S ribosomal RNA (H5), 30S ribosomal protein S12, 30S ribosomal protein S2, ... 著者 Connell, S.R, Wilson, D.N, Rost, M, Schueler, M, Giesebrecht, J, Dabrowski, M, Mielke, T, Fucini, P, Spahn, C.M.T. 登録日 2007-01-21 公開日 2008-01-15 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (7.3 Å) 主引用文献 Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. Mol.Cell, 25, 2007
2P8W	Fitted structure of eEF2 in the 80S:eEF2:GDPNP cryo-EM reconstruction 分子名称: Elongation factor 2, Elongation factor Tu-B, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 著者 Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J. 登録日 2007-03-23 公開日 2007-05-08 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (11.3 Å) 主引用文献 Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation. Embo J., 26, 2007
2NPF	Structure of eEF2 in complex with moriniafungin 分子名称: (1S,4R,5R,9S,11S)-2-({[(2S,5R,6R,7R,9S,10R)-2-(7-CARBOXYHEPTYL)-6-HYDROXY-10-METHOXY-9-METHYL-3-OXO-1,4,8-TRIOXASPIRO[4 .5]DEC-7-YL]OXY}METHYL)-9-FORMYL-13-ISOPROPYL-5-METHYLTETRACYCLO[7.4.0.02,11.04.8]TRIDEC-12-ENE-1-CARBOXYLIC ACID, Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE 著者 Soe, R, Mosley, R.T, Andersen, G.R. 登録日 2006-10-27 公開日 2006-11-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Sordarin derivatives induce a novel conformation of the yeast ribosome translocation factor eEF2 J.Biol.Chem., 282, 2007
4IW3	Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) in complex with elongation factor Tu (EF-Tu) 分子名称: Elongation factor Tu-A, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Scotti, J.S, McDonough, M.A, Schofield, C.J. 登録日 2013-01-23 公開日 2014-01-29 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.697 Å) 主引用文献 Human oxygen sensing may have origins in prokaryotic elongation factor Tu prolyl-hydroxylation Proc.Natl.Acad.Sci.USA, 111, 2014
4J0Q	Crystal structure of Pseudomonas putida elongation factor Tu (EF-Tu) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Elongation factor Tu-A, ... 著者 Scotti, J.S, McDonough, M.A, Schofield, C.J. 登録日 2013-01-31 公開日 2014-02-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.294 Å) 主引用文献 Human oxygen sensing may have origins in prokaryotic elongation factor Tu prolyl-hydroxylation Proc.Natl.Acad.Sci.USA, 111, 2014

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