2DBE
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![BU of 2dbe by Molmil](/molmil-images/mine/2dbe) | CRYSTAL STRUCTURE OF A BERENIL-DODECANUCLEOTIDE COMPLEX: THE ROLE OF WATER IN SEQUENCE-SPECIFIC LIGAND BINDING | 分子名称: | BERENIL, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') | 著者 | Brown, D.G, Sanderson, M.R, Skelly, J.V, Jenkins, T.C, Brown, T, Garman, E, Stuart, D.I, Neidle, S. | 登録日 | 1990-03-19 | 公開日 | 1991-07-15 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structure of a berenil-dodecanucleotide complex: the role of water in sequence-specific ligand binding. EMBO J., 9, 1990
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5XVN
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![BU of 5xvn by Molmil](/molmil-images/mine/5xvn) | E. far Cas1-Cas2/prespacer binary complex | 分子名称: | CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (28-MER), ... | 著者 | Xiao, Y, Ng, S, Nam, K.H, Ke, A. | 登録日 | 2017-06-28 | 公開日 | 2017-10-04 | 最終更新日 | 2024-05-22 | 実験手法 | X-RAY DIFFRACTION (3.25 Å) | 主引用文献 | How type II CRISPR-Cas establish immunity through Cas1-Cas2-mediated spacer integration. Nature, 550, 2017
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5BS3
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![BU of 5bs3 by Molmil](/molmil-images/mine/5bs3) | Crystal Structure of S.A. gyrase in complex with Compound 7 | 分子名称: | (4R)-3-fluoro-4-hydroxy-4-{[(1r,4R)-4-{[(3-oxo-3,4-dihydro-2H-pyrido[3,2-b][1,4]oxazin-6-yl)methyl]amino}-2-oxabicyclo[2.2.2]oct-1-yl]methyl}-4,5-dihydro-7H-pyrrolo[3,2,1-de][1,5]naphthyridin-7-one, DNA gyrase subunit A and B, DNA/RNA (5'-R(P*AP*GP*CP*CP*G)-D(P*T)-R(P*AP*GP*GP*GP*CP*CP*C)-D(P*T)-R(P*AP*CP*GP*GP*C)-D(P*T)-3'), ... | 著者 | Lu, J, Patel, S, Soisson, S. | 登録日 | 2015-06-01 | 公開日 | 2015-06-17 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (2.65 Å) | 主引用文献 | Tricyclic 1,5-naphthyridinone oxabicyclooctane-linked novel bacterial topoisomerase inhibitors as broad-spectrum antibacterial agents-SAR of left-hand-side moiety (Part-2). Bioorg.Med.Chem.Lett., 25, 2015
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1Y9F
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![BU of 1y9f by Molmil](/molmil-images/mine/1y9f) | Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-allyl Thymidine (T*) | 分子名称: | 5'-D(*GP*CP*GP*TP*AP*(2AT)P*AP*CP*GP*C)-3') | 著者 | Egli, M, Minasov, G, Tereshko, V, Pallan, P.S, Teplova, M, Inamati, G.B, Lesnik, E.A, Owens, S.R, Ross, B.S, Prakash, T.P, Manoharan, M. | 登録日 | 2004-12-15 | 公開日 | 2005-06-28 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Probing the Influence of Stereoelectronic Effects on the Biophysical Properties of Oligonucleotides: Comprehensive Analysis of the RNA Affinity, Nuclease Resistance, and Crystal Structure of Ten 2'-O-Ribonucleic Acid Modifications. Biochemistry, 44, 2005
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1Y8V
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![BU of 1y8v by Molmil](/molmil-images/mine/1y8v) | Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-propyl Thymidine (T*) | 分子名称: | 5'-D(*GP*CP*GP*TP*AP*(P2T)P*AP*CP*GP*C)-3' | 著者 | Egli, M, Minasov, G, Tereshko, V, Pallan, P.S, Teplova, M, Inamati, G.B, Lesnik, E.A, Owens, S.R, Ross, B.S, Prakash, T.P, Manoharan, M. | 登録日 | 2004-12-13 | 公開日 | 2005-06-28 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Probing the Influence of Stereoelectronic Effects on the Biophysical Properties of Oligonucleotides: Comprehensive Analysis of the RNA Affinity, Nuclease Resistance, and Crystal Structure of Ten 2'-O-Ribonucleic Acid Modifications. Biochemistry, 44, 2005
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2ZJ5
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![BU of 2zj5 by Molmil](/molmil-images/mine/2zj5) | Archaeal DNA helicase Hjm complexed with ADP in form 1 | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, Putative ski2-type helicase, SULFATE ION | 著者 | Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K. | 登録日 | 2008-02-29 | 公開日 | 2009-02-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm Bmc Struct.Biol., 9, 2009
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2ZJA
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![BU of 2zja by Molmil](/molmil-images/mine/2zja) | Archaeal DNA helicase Hjm complexed with AMPPCP in form 2 | 分子名称: | PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Putative ski2-type helicase | 著者 | Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K. | 登録日 | 2008-02-29 | 公開日 | 2009-02-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm Bmc Struct.Biol., 9, 2009
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7JQ7
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![BU of 7jq7 by Molmil](/molmil-images/mine/7jq7) | The Phi-28 gp11 DNA packaging Motor | 分子名称: | Encapsidation protein, IODIDE ION, SULFATE ION | 著者 | Morais, M.C, White, M.A, Dill, E. | 登録日 | 2020-08-10 | 公開日 | 2021-06-16 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.895 Å) | 主引用文献 | Atomistic basis of force generation, translocation, and coordination in a viral genome packaging motor. Nucleic Acids Res., 49, 2021
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7JQP
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![BU of 7jqp by Molmil](/molmil-images/mine/7jqp) | The Phi-28 gp11 DNA packaging Motor | 分子名称: | Encapsidation protein, SULFATE ION | 著者 | Morais, M.C, White, M.A, Dill, E. | 登録日 | 2020-08-11 | 公開日 | 2021-06-16 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.89 Å) | 主引用文献 | Atomistic basis of force generation, translocation, and coordination in a viral genome packaging motor. Nucleic Acids Res., 49, 2021
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7JQ6
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![BU of 7jq6 by Molmil](/molmil-images/mine/7jq6) | The Phi-28 gp11 DNA packaging Motor | 分子名称: | Encapsidation protein, SULFATE ION | 著者 | Morais, M.C, White, M.A, Dill, E. | 登録日 | 2020-08-10 | 公開日 | 2021-06-16 | 最終更新日 | 2021-07-14 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Atomistic basis of force generation, translocation, and coordination in a viral genome packaging motor. Nucleic Acids Res., 49, 2021
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2ZJ2
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![BU of 2zj2 by Molmil](/molmil-images/mine/2zj2) | Archaeal DNA helicase Hjm apo state in form 1 | 分子名称: | Putative ski2-type helicase, SULFATE ION | 著者 | Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K. | 登録日 | 2008-02-29 | 公開日 | 2009-02-10 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm Bmc Struct.Biol., 9, 2009
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2ZJ8
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![BU of 2zj8 by Molmil](/molmil-images/mine/2zj8) | Archaeal DNA helicase Hjm apo state in form 2 | 分子名称: | Putative ski2-type helicase | 著者 | Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K. | 登録日 | 2008-02-29 | 公開日 | 2009-02-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm Bmc Struct.Biol., 9, 2009
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6QZV
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![BU of 6qzv by Molmil](/molmil-images/mine/6qzv) | |
1Y8L
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![BU of 1y8l by Molmil](/molmil-images/mine/1y8l) | Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(trifluoro)ethyl] Thymidine (T*) | 分子名称: | 5'-D(*GP*CP*GP*TP*AP*(TFE)P*AP*CP*GP*C)-3'), MAGNESIUM ION, SPERMINE | 著者 | Egli, M, Minasov, G, Tereshko, V, Pallan, P.S, Teplova, M, Inamati, G.B, Lesnik, E.A, Owens, S.R, Ross, B.S, Prakash, T.P, Manoharan, M. | 登録日 | 2004-12-13 | 公開日 | 2005-06-28 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Probing the Influence of Stereoelectronic Effects on the Biophysical Properties of Oligonucleotides: Comprehensive Analysis of the RNA Affinity, Nuclease Resistance, and Crystal Structure of Ten 2'-O-Ribonucleic Acid Modifications. Biochemistry, 44, 2005
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1R7M
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![BU of 1r7m by Molmil](/molmil-images/mine/1r7m) | The homing endonuclease I-SceI bound to its DNA recognition region | 分子名称: | 5'-D(*CP*AP*CP*GP*CP*TP*AP*GP*GP*GP*AP*TP*AP*AP*CP*AP*GP*GP*GP*TP*AP*AP*TP*AP*C)-3', 5'-D(*GP*GP*TP*AP*TP*TP*AP*CP*CP*CP*TP*GP*TP*TP*AP*TP*CP*CP*CP*TP*AP*GP*CP*GP*T)-3', CALCIUM ION, ... | 著者 | Moure, C.M, Gimble, F.S, Quiocho, F.A. | 登録日 | 2003-10-21 | 公開日 | 2004-10-26 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | 主引用文献 | The crystal structure of the gene targeting homing endonuclease I-SceI reveals the origins of its target site specificity J.Mol.Biol., 334, 2003
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7EYI
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![BU of 7eyi by Molmil](/molmil-images/mine/7eyi) | |
5OY7
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![BU of 5oy7 by Molmil](/molmil-images/mine/5oy7) | Structure of the 4_601_157 tetranucleosome (P1 form) | 分子名称: | CHLORIDE ION, DNA (619-MER), Histone H2A, ... | 著者 | Ekundayo, B, Richmond, T.J, Schalch, T. | 登録日 | 2017-09-07 | 公開日 | 2017-09-20 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (5.774 Å) | 主引用文献 | Capturing Structural Heterogeneity in Chromatin Fibers. J. Mol. Biol., 429, 2017
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5CR2
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1D9N
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![BU of 1d9n by Molmil](/molmil-images/mine/1d9n) | SOLUTION STRUCTURE OF THE METHYL-CPG-BINDING DOMAIN OF THE METHYLATION-DEPENDENT TRANSCRIPTIONAL REPRESSOR MBD1/PCM1 | 分子名称: | METHYL-CPG-BINDING PROTEIN MBD1 | 著者 | Ohki, I, Shimotake, N, Fujita, N, Nakao, M, Shirakawa, M. | 登録日 | 1999-10-28 | 公開日 | 2000-10-28 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the methyl-CpG-binding domain of the methylation-dependent transcriptional repressor MBD1. EMBO J., 18, 1999
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5XF4
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![BU of 5xf4 by Molmil](/molmil-images/mine/5xf4) | Nucleosome core particle with an adduct of a binuclear RAPTA (Ru-arene-phosphaadamantane) compound having a 1,2-diphenylethylenediamine linker (S,S-configuration) | 分子名称: | (1S,2S)-1,2-diphenylethane-1,2-diamine, DNA (145-MER), Histone H2A type 1-B/E, ... | 著者 | Ma, Z, Adhireksan, Z, Murray, B.S, Dyson, P.J, Davey, C.A. | 登録日 | 2017-04-07 | 公開日 | 2017-10-11 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.87 Å) | 主引用文献 | Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation Nat Commun, 8, 2017
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2FIH
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2FII
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381D
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![BU of 381d by Molmil](/molmil-images/mine/381d) | BINDING OF THE MODIFIED DAUNORUBICIN WP401 ADJACENT TO A T-G BASE PAIR INDUCES THE REVERSE WATSON-CRICK CONFORMATION: CRYSTAL STRUCTURES OF THE WP401-TGGCCG AND WP401-CGG[BR5C]CG COMPLEXES | 分子名称: | 2'-BROMO-4'-EPIDAUNORUBICIN, DNA (5'-D(*TP*GP*(G49)P*CP*CP*G)-3'), DNA (5'-D(*TP*GP*GP*CP*CP*G)-3') | 著者 | Dutta, R, Gao, Y.-G, Priebe, W, Wang, A.H.-J. | 登録日 | 1998-02-18 | 公開日 | 1998-07-13 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Binding of the modified daunorubicin WP401 adjacent to a T-G base pair induces the reverse Watson-Crick conformation: crystal structures of the WP401-TGGCCG and WP401-CGG[br5C]CG complexes. Nucleic Acids Res., 26, 1998
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2FIJ
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2LMC
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![BU of 2lmc by Molmil](/molmil-images/mine/2lmc) | |