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8FKU
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Human nucleolar pre-60S ribosomal subunit (State C2)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKS
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Human nucleolar pre-60S ribosomal subunit (State B2)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L12, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKQ
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Human nucleolar pre-60S ribosomal subunit (State A2)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L13, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
7TYV
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Structure of Lassa Virus glycoprotein (Josiah) bound to Fab 25.10C
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 25.10C Fab Heavy Chain, ...
著者Enriquez, A.S, Hastie, K.M.
登録日2022-02-14
公開日2022-06-01
最終更新日2022-06-15
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Delineating the mechanism of anti-Lassa virus GPC-A neutralizing antibodies.
Cell Rep, 39, 2022
7U21
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BU of 7u21 by Molmil
Human Class I MHC HLA-A2 in complex with AVGSYVYSV peptide
分子名称: Beta-2-microglobulin, MHC class I antigen, A-2 alpha chain, ...
著者Weiss, L.I, Baker, B.M.
登録日2022-02-22
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Physicochemical Heuristics for Identifying High Fidelity, Near-Native Structural Models of Peptide/MHC Complexes.
Front Immunol, 13, 2022
4D83
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Crystal Structure of Human Beta Secretase in Complex with NVP-BUR436, derived from a co-crystallization experiment
分子名称: (3R,4S,5S)-3-[(3-tert-butylbenzyl)amino]-5-{[3-(2,2-difluoroethyl)-1H-indol-5-yl]methyl}tetrahydro-2H-thiopyran-4-ol 1,1-dioxide, Beta-secretase 1
著者Rondeau, J.M, Bourgier, E.
登録日2012-01-10
公開日2012-11-21
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Discovery of cyclic sulfone hydroxyethylamines as potent and selective beta-site APP-cleaving enzyme 1 (BACE1) inhibitors: structure based design and in vivo reduction of amyloid beta-peptides
J.Med.Chem., 55, 2012
7TRG
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BU of 7trg by Molmil
The beta-tubulin folding intermediate I
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
著者Zhao, Y, Frydman, J, Chiu, W.
登録日2022-01-28
公開日2022-12-28
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT.
Cell, 185, 2022
7TSX
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Structure of Enterobacter cloacae Cap2 bound to CdnD02 C-terminus, Apo state
分子名称: Cap2, Cyclic AMP-AMP-GMP synthase
著者Ye, Q, Gu, Y, Ledvina, H.E, Quan, Y, Lau, R.K, Zhou, H, Whiteley, A.T, Corbett, K.D.
登録日2022-01-31
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献An E1-E2 fusion protein primes antiviral immune signalling in bacteria.
Nature, 616, 2023
7UFJ
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Structure of human MR1-ethylvanillin in complex with human MAIT A-F7 TCR
分子名称: 3-ethoxy-4-hydroxybenzaldehyde, ACETATE ION, Beta-2-microglobulin, ...
著者Wang, C.J, Rossjohn, J, Le Nours, J.
登録日2022-03-22
公開日2022-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Quantitative affinity measurement of small molecule ligand binding to Major Histocompatibility Complex class-I related protein 1 MR1.
J.Biol.Chem., 298, 2022
7TSQ
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Structure of Enterobacter cloacae Cap2 bound to CdnD02 C-terminus, AMP state
分子名称: ADENOSINE MONOPHOSPHATE, Cap2, Cyclic AMP-AMP-GMP synthase, ...
著者Ye, Q, Gu, Y, Ledvina, H.E, Quan, Y, Lau, R.K, Zhou, H, Whiteley, A.T, Corbett, K.D.
登録日2022-01-31
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献An E1-E2 fusion protein primes antiviral immune signalling in bacteria.
Nature, 616, 2023
7UYG
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Structure of the first OTU domain from Legionella pneumophila effector protein LotA
分子名称: GLYCEROL, IODIDE ION, LotA
著者Pruneda, J.N.
登録日2022-05-06
公開日2022-12-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanism of Lys6 poly-ubiquitin specificity by the L. pneumophila deubiquitinase LotA.
Mol.Cell, 83, 2023
7UYH
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Structure of the first OTU domain from Legionella pneumophila effector protein LotA bound to K6-linked diUb
分子名称: LotA, Ubiquitin
著者Warren, G.D, Pruneda, J.N.
登録日2022-05-06
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mechanism of Lys6 poly-ubiquitin specificity by the L. pneumophila deubiquitinase LotA.
Mol.Cell, 83, 2023
7TNC
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BU of 7tnc by Molmil
M13F/G116F Pseudomonas aeruginosa azurin
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Azurin, CHLORIDE ION, ...
著者Liu, Y, Lu, Y.
登録日2022-01-20
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structural Basis for the Effects of Phenylalanine on Tuning the Reduction Potential of Type 1 Copper in Azurin.
Inorg.Chem., 62, 2023
7SUO
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BU of 7suo by Molmil
Crystal Structure of the G3BP1 NTF2-like domain bound to the IDR1 of SARS-CoV-2 nucleocapsid protein
分子名称: Nucleoprotein, Ras GTPase-activating protein-binding protein 1
著者Biswal, M, Lu, J, Song, J.
登録日2021-11-17
公開日2022-03-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献SARS-CoV-2 Nucleocapsid Protein Targets a Conserved Surface Groove of the NTF2-like Domain of G3BP1.
J.Mol.Biol., 434, 2022
3ZL6
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BU of 3zl6 by Molmil
Native structure of Farnesyl Pyrophosphate Synthase from Pseudomonas aeruginosa PAO1, with bound fragment KM10833.
分子名称: 2-(1,2-benzoxazol-3-yl)ethanoic acid, DIMETHYL SULFOXIDE, GERANYLTRANSTRANSFERASE, ...
著者Schmidberger, J.W, Schnell, R, Schneider, G.
登録日2013-01-28
公開日2014-02-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Characterization of Substrate and Inhibitor Binding to Farnesyl Pyrophosphate Synthase from Pseudomonas Aeruginosa.
Acta Crystallogr.,Sect.D, 71, 2015
7XMA
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BU of 7xma by Molmil
Crystal structure of Bovine heart cytochrome c oxidase, apo structure with DMSO
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Nishida, Y, Shinzawa-Itoh, K, Mizuno, N, Kumasaka, T, Yoshikawa, S, Tsukihara, T, Takashima, S, Shintani, Y.
登録日2022-04-25
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases.
Nat Commun, 13, 2022
7XMB
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Crystal structure of Bovine heart cytochrome c oxidase, the structure complexed with an allosteric inhibitor T113
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Nishida, Y, Shinzawa-Itoh, K, Mizuno, N, Kumasaka, T, Yoshikawa, S, Tsukihara, T, Shintani, Y, Takashima, S.
登録日2022-04-25
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases.
Nat Commun, 13, 2022
7WZX
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The structure of a Twitch Radical SAM Dehydrogenase SpeY
分子名称: (2~{S},4~{S},6~{R})-2-[(2~{S},3~{R},5~{S},6~{R})-3,5-bis(methylamino)-2,4,6-tris(oxidanyl)cyclohexyl]oxy-6-methyl-4-oxidanyl-oxan-3-one, 4Fe-4S cluster-binding domain-containing protein, GLYCEROL, ...
著者Hou, X.L, Zhou, J.H.
登録日2022-02-19
公開日2022-12-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.980013 Å)
主引用文献Dioxane Bridge Formation during the Biosynthesis of Spectinomycin Involves a Twitch Radical S -Adenosyl Methionine Dehydrogenase That May Have Evolved from an Epimerase.
J.Am.Chem.Soc., 144, 2022
7WZV
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The structure of a Twitch Radical SAM Dehydrogenase SpeY
分子名称: (1~{S},2~{R},4~{S},5~{R})-2,4-bis(methylamino)-6-[(2~{S},3~{R},4~{S},6~{R})-6-methyl-3,4-bis(oxidanyl)oxan-2-yl]oxy-cyclohexane-1,3,5-triol, 1,2-ETHANEDIOL, 4Fe-4S cluster-binding domain-containing protein, ...
著者Zhou, J.H, Hou, X.L.
登録日2022-02-19
公開日2022-12-28
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.899313 Å)
主引用文献Dioxane Bridge Formation during the Biosynthesis of Spectinomycin Involves a Twitch Radical S -Adenosyl Methionine Dehydrogenase That May Have Evolved from an Epimerase.
J.Am.Chem.Soc., 144, 2022
7X0B
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BU of 7x0b by Molmil
The structure of a Twitch Radical SAM Dehydrogenase SpeY
分子名称: 4Fe-4S cluster-binding domain-containing protein, CHLORIDE ION, GLYCEROL, ...
著者Hou, X.L, Zhou, J.H.
登録日2022-02-21
公開日2022-12-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.02027535 Å)
主引用文献Dioxane Bridge Formation during the Biosynthesis of Spectinomycin Involves a Twitch Radical S -Adenosyl Methionine Dehydrogenase That May Have Evolved from an Epimerase.
J.Am.Chem.Soc., 144, 2022
7TXY
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BU of 7txy by Molmil
Crystal structure of the 2-Aminophenol 1,6-dioxygenase from the ARO bacterial microcompartment of Micromonospora rosaria
分子名称: 2-amino-5-chlorophenol 1,6-dioxygenase subunit alpha, 2-aminophenol 1,6-dioxygenase subunit beta, FE (II) ION
著者Sutter, M, Doron, L, Kerfeld, C.A.
登録日2022-02-10
公開日2023-02-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Characterization of a novel aromatic substrate-processing microcompartment in Actinobacteria.
Mbio, 14, 2023
7W3J
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Structure of USP14-bound human 26S proteasome in substrate-inhibited state SC_USP14
分子名称: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
著者Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
登録日2021-11-25
公開日2022-05-04
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W39
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BU of 7w39 by Molmil
Structure of USP14-bound human 26S proteasome in state EA2.1_UBL
分子名称: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
著者Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
登録日2021-11-25
公開日2022-05-04
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W37
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Structure of USP14-bound human 26S proteasome in state EA1_UBL
分子名称: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
著者Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
登録日2021-11-25
公開日2022-05-04
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
8FKX
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BU of 8fkx by Molmil
Human nucleolar pre-60S ribosomal subunit (State E)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023

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