Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7T1U
DownloadVisualize
BU of 7t1u by Molmil
Crystal structure of a superbinder Src SH2 domain (sSrcF) in complex with a high affinity phosphopeptide
分子名称: Proto-oncogene tyrosine-protein kinase Src, Synthetic phosphopeptide, ZINC ION
著者Martyn, G.D, Singer, A.U, Manczyk, N, Veggiani, G, Kurinov, I, Sicheri, F, Sidhu, S.S.
登録日2021-12-02
公開日2022-08-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Engineered SH2 Domains for Targeted Phosphoproteomics.
Acs Chem.Biol., 17, 2022
6P0K
DownloadVisualize
BU of 6p0k by Molmil
Crystal structure of GDP-bound human RalA in a covalent complex with aryl sulfonyl fluoride compounds.
分子名称: 4-[(6-chloropyridin-2-yl)sulfamoyl]benzene-1-sulfonic acid, CALCIUM ION, CHLORIDE ION, ...
著者Bum-Erdene, K, Gonzalez-Gutierrez, G, Liu, D, Ghozayel, M.K, Xu, D, Meroueh, S.O.
登録日2019-05-17
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Small-molecule covalent bond formation at tyrosine creates a binding site and inhibits activation of Ral GTPases.
Proc.Natl.Acad.Sci.USA, 117, 2020
6P0O
DownloadVisualize
BU of 6p0o by Molmil
Crystal structure of GDP-bound human RalA
分子名称: CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Ral-A
著者Bum-Erdene, K, Gonzalez-Gutierrez, G, Liu, D, Ghozayel, M.K, Xu, D, Meroueh, S.O.
登録日2019-05-17
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Small-molecule covalent bond formation at tyrosine creates a binding site and inhibits activation of Ral GTPases.
Proc.Natl.Acad.Sci.USA, 117, 2020
6V67
DownloadVisualize
BU of 6v67 by Molmil
Apo Structure of the De Novo PD-1 Binding Miniprotein GR918.2
分子名称: PD-1 Binding Miniprotein GR918.2
著者Bick, M.J, Bryan, C.M, Baker, D, Dimaio, F, Kang, A.
登録日2019-12-04
公開日2020-12-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Computational design of a synthetic PD-1 agonist.
Proc.Natl.Acad.Sci.USA, 118, 2021
7SMC
DownloadVisualize
BU of 7smc by Molmil
p107 pocket domain complexed with ARID4A peptide
分子名称: AT-rich interactive domain-containing protein 4A, Retinoblastoma-like protein 1, SULFATE ION
著者Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M.
登録日2021-10-25
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family.
Structure, 30, 2022
6UTQ
DownloadVisualize
BU of 6utq by Molmil
LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase in complex with cadmium
分子名称: ATP-dependent sacrificial sulfur transferase LarE, CADMIUM ION, PHOSPHATE ION, ...
著者Fellner, M, Huizenga, K, Hausinger, R.P, Hu, J.
登録日2019-10-29
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Crystallographic characterization of a tri-Asp metal-binding site at the three-fold symmetry axis of LarE.
Sci Rep, 10, 2020
6MAJ
DownloadVisualize
BU of 6maj by Molmil
HBO1 is required for the maintenance of leukaemia stem cells
分子名称: 4-fluoro-N'-[(3-hydroxyphenyl)sulfonyl]-5-methyl[1,1'-biphenyl]-3-carbohydrazide, BRD1 protein, GLYCEROL, ...
著者Ren, B, Peat, T.S, Monahan, B, Dawson, M, Street, I.
登録日2018-08-27
公開日2019-12-25
最終更新日2020-01-22
実験手法X-RAY DIFFRACTION (2.139 Å)
主引用文献HBO1 is required for the maintenance of leukaemia stem cells.
Nature, 577, 2020
7T5R
DownloadVisualize
BU of 7t5r by Molmil
P. aeruginosa LpxA in complex with ligand H7
分子名称: 3-bromo-N-[3-(1H-tetrazol-5-yl)phenyl]-1H-indole-5-carboxamide, Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, GLYCEROL
著者Sacco, M, Chen, Y.
登録日2021-12-13
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure-Based Ligand Design Targeting Pseudomonas aeruginosa LpxA in Lipid A Biosynthesis.
Acs Infect Dis., 8, 2022
6MAV
DownloadVisualize
BU of 6mav by Molmil
Complex of tissue inhibitor of metalloproteinase-1 (TIMP-1) mutant L34G with matrix metalloproteinase-3 catalytic domain (MMP-3cd)
分子名称: CALCIUM ION, Metalloproteinase inhibitor 1, Stromelysin-1, ...
著者Raeeszadeh-Sarmazdeh, M, Radisky, E.
登録日2018-08-28
公開日2019-05-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Directed evolution of the metalloproteinase inhibitor TIMP-1 reveals that its N- and C-terminal domains cooperate in matrix metalloproteinase recognition.
J.Biol.Chem., 294, 2019
6MB5
DownloadVisualize
BU of 6mb5 by Molmil
AAC-IIIb binary with NEOMYCIN
分子名称: Aac(3)-IIIb protein, NEOMYCIN
著者Cuneo, M.J, Kumar, P.
登録日2018-08-29
公開日2018-11-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Encoding of Promiscuity in an Aminoglycoside Acetyltransferase.
J. Med. Chem., 61, 2018
5ANV
DownloadVisualize
BU of 5anv by Molmil
MTH1 in complex with compound 15
分子名称: 4-(4-CHLORO-2-FLUORO-ANILINO)-6,7-DIMETHOXY-N-METHYL-QUINOLINE-3-CARBOXAMIDE, 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
著者Read, J.A, Breed, J.
登録日2015-09-08
公開日2016-03-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Potent and Selective Inhibitors of Mth1 Probe its Role in Cancer Cell Survival.
J.Med.Chem., 59, 2016
7TE2
DownloadVisualize
BU of 7te2 by Molmil
Crystal Structure of AerR from Rhodobacter capsulatus at 2.25 A.
分子名称: AerR, CHLORIDE ION, COBALAMIN, ...
著者Dragnea, V, Gonzalez-Gutierrez, G, Bauer, C.E.
登録日2022-01-04
公開日2022-08-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural Analyses of CrtJ and Its B 12 -Binding Co-Regulators SAerR and LAerR from the Purple Photosynthetic Bacterium Rhodobacter capsulatus.
Microorganisms, 10, 2022
8D47
DownloadVisualize
BU of 8d47 by Molmil
fp.006 Fab in complex with SARS-CoV-2 Fusion Peptide
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
著者Abernathy, M.E, Barnes, C.O.
登録日2022-06-01
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Human neutralizing antibodies to cold linear epitopes and subdomain 1 of the SARS-CoV-2 spike glycoprotein.
Sci Immunol, 8, 2023
6MB7
DownloadVisualize
BU of 6mb7 by Molmil
Binary (paromomycin) structure of AAC-IIIb
分子名称: Aac(3)-IIIb protein, PAROMOMYCIN
著者Cuneo, M.J, Kumar, P.
登録日2018-08-29
公開日2018-11-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Encoding of Promiscuity in an Aminoglycoside Acetyltransferase.
J. Med. Chem., 61, 2018
8D39
DownloadVisualize
BU of 8d39 by Molmil
The crystal structure of WT CYP199A4 bound to 4-benzoylbenzoic acid
分子名称: 4-benzoylbenzoic acid, CHLORIDE ION, Cytochrome P450, ...
著者Podgorski, M.N, Bell, S.G.
登録日2022-06-01
公開日2023-01-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.268 Å)
主引用文献Enabling Aromatic Hydroxylation in a Cytochrome P450 Monooxygenase Enzyme through Protein Engineering.
Chemistry, 28, 2022
5AOG
DownloadVisualize
BU of 5aog by Molmil
Structure of Sorghum peroxidase
分子名称: 1H-INDOL-3-YLACETIC ACID, CALCIUM ION, CATIONIC PEROXIDASE SPC4, ...
著者Kwon, H, Nnamchi, C.I, Parkin, G, Efimov, I, Agirre, J, Basran, J, Raven, E.L, Moody, P.C.E.
登録日2015-09-10
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Structural and Spectroscopic Characterisation of a Heme Peroxidase from Sorghum.
J.Biol.Inorg.Chem., 21, 2016
6UUP
DownloadVisualize
BU of 6uup by Molmil
Structure of anti-hCD33 conditional scFv
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Anti-CD33 conditional scFv, DI(HYDROXYETHYL)ETHER, ...
著者Kimberlin, C.R, Park, S.
登録日2019-10-31
公開日2020-11-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.20001864 Å)
主引用文献Direct control of CAR T cells through small molecule-regulated antibodies.
Nat Commun, 12, 2021
7WH4
DownloadVisualize
BU of 7wh4 by Molmil
Crystal structure of the PadR-family transcriptional regulator Rv3488 of Mycobacterium tuberculosis H37Rv in complex with Manganese ion
分子名称: MANGANESE (II) ION, Transcriptional regulator Rv3488
著者Arora, A, Zohib, M, Biswal, B.K, Pal, R.K.
登録日2021-12-29
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of PadR-family transcriptional regulator Rv3488 of Mycobacterium tuberculosis H37Rv in complex with Manganese ion
To Be Published
6MDE
DownloadVisualize
BU of 6mde by Molmil
Mevalonate kinase from Methanosarcina mazei with mevalonate bound
分子名称: (R)-MEVALONATE, GLYCEROL, Mevalonate kinase, ...
著者Miller, B.R, Kung, Y.
登録日2018-09-04
公開日2018-12-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insight into substrate and product binding in an archaeal mevalonate kinase.
PLoS ONE, 13, 2018
7TA2
DownloadVisualize
BU of 7ta2 by Molmil
Crystal structure of the human sperm-expressed surface protein SPACA6
分子名称: BROMIDE ION, Sperm acrosome membrane-associated protein 6
著者Vance, T.D.R, Yip, P, Jimenez, E, Uson, I, Lee, J.E.
登録日2021-12-20
公開日2022-08-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献SPACA6 ectodomain structure reveals a conserved superfamily of gamete fusion-associated proteins.
Commun Biol, 5, 2022
5AOZ
DownloadVisualize
BU of 5aoz by Molmil
High resolution SeMet structure of the third cohesin from Ruminococcus flavefaciens scaffoldin protein, ScaB
分子名称: GLYCEROL, PUTATIVE CELLULOSOMAL SCAFFOLDIN PROTEIN
著者Bule, P, Carvalho, A.L, Santos, H, Fontes, C.M.G.A, Najmudin, S.
登録日2015-09-14
公開日2016-09-28
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Structural Characterization of the Third Cohesin from Ruminococcus Flavefaciens Scaffoldin Protein, Scab
To be Published
6ALZ
DownloadVisualize
BU of 6alz by Molmil
Crystal structure of Protein Phosphatase 1 bound to the natural inhibitor Tautomycetin
分子名称: (2Z)-2-[(1R)-3-{[(2R,3S,4R,7S,8S,11S,13R,16E)-17-ethyl-4,8-dihydroxy-3,7,11,13-tetramethyl-6,15-dioxononadeca-16,18-dien-2-yl]oxy}-1-hydroxy-3-oxopropyl]-3-methylbut-2-enedioic acid, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Choy, M.S, Peti, W, Page, R.
登録日2017-08-08
公開日2017-11-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.208 Å)
主引用文献PP1:Tautomycetin Complex Reveals a Path toward the Development of PP1-Specific Inhibitors.
J. Am. Chem. Soc., 139, 2017
6MC2
DownloadVisualize
BU of 6mc2 by Molmil
Crystal structure of a tetrameric DNA fold-back quadruplex
分子名称: DNA (5'-D(*CP*GP*TP*AP*AP*GP*GP*CP*G)-3'), MAGNESIUM ION
著者Chu, B, Paukstelis, P.J.
登録日2018-08-30
公開日2018-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Crystal Structure of a Tetrameric DNA Fold-Back Quadruplex.
J. Am. Chem. Soc., 140, 2018
5AQ1
DownloadVisualize
BU of 5aq1 by Molmil
Trypanosoma cruzi Glucose-6-phosphate Dehydrogenase in complex with G6P and NADPH
分子名称: 6-O-phosphono-beta-D-glucopyranose, GLUCOSE-6-PHOSPHATE DEHYDROGENASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Mercaldi, G.F, Dawson, A, Hunter, W.N, Cordeiro, A.T.
登録日2015-09-18
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The Structure of a Trypanosoma Cruzi Glucose-6-Phosphate Dehydrogenase Reveals Differences from the Mammalian Enzyme.
FEBS Lett., 590, 2016
6AM9
DownloadVisualize
BU of 6am9 by Molmil
Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB2B9, with Ser-bound in a predominantly closed state.
分子名称: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, SODIUM ION, Tryptophan synthase beta chain 1, ...
著者Buller, A.R, van Roye, P.
登録日2017-08-09
公開日2018-05-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Directed Evolution Mimics Allosteric Activation by Stepwise Tuning of the Conformational Ensemble.
J. Am. Chem. Soc., 140, 2018

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon