Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3AVX
DownloadVisualize
BU of 3avx by Molmil
Structure of viral RNA polymerase complex 5
分子名称: 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
著者Takeshita, D, Tomita, K.
登録日2011-03-08
公開日2012-01-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.406 Å)
主引用文献Molecular basis for RNA polymerization by Q beta replicase
Nat.Struct.Mol.Biol., 19, 2012
3AVV
DownloadVisualize
BU of 3avv by Molmil
Structure of viral RNA polymerase complex 3
分子名称: CALCIUM ION, Elongation factor Ts, Elongation factor Tu, ...
著者Takeshita, D, Tomita, K.
登録日2011-03-08
公開日2012-01-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.119 Å)
主引用文献Molecular basis for RNA polymerization by Q beta replicase
Nat.Struct.Mol.Biol., 19, 2012
3AVY
DownloadVisualize
BU of 3avy by Molmil
Structure of viral RNA polymerase complex 6
分子名称: 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
著者Takeshita, D, Tomita, K.
登録日2011-03-08
公開日2012-01-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.616 Å)
主引用文献Molecular basis for RNA polymerization by Q beta replicase
Nat.Struct.Mol.Biol., 19, 2012
2R7S
DownloadVisualize
BU of 2r7s by Molmil
Crystal Structure of Rotavirus SA11 VP1 / RNA (UGUGCC) complex
分子名称: PHOSPHATE ION, RNA (5'-R(*UP*GP*UP*GP*CP*C)-3'), RNA-dependent RNA polymerase
著者Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
登録日2007-09-10
公開日2008-07-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
1YTY
DownloadVisualize
BU of 1yty by Molmil
Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen
分子名称: 5'-R(*UP*GP*CP*UP*GP*UP*UP*UP*U)-3', Lupus La protein
著者Teplova, M, Yuan, Y.R, Ilin, S, Malinina, L, Phan, A.T, Teplov, A, Patel, D.J.
登録日2005-02-11
公開日2006-01-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structural Basis for Recognition and Sequestration of UUU(OH) 3' Temini of Nascent RNA Polymerase III Transcripts by La, a Rheumatic Disease Autoantigen.
Mol.Cell, 21, 2006
7RIL
DownloadVisualize
BU of 7ril by Molmil
Crystal structure of hairpin polyamide Py-Im 1 bound to 5' CCTGACCAGG
分子名称: 3-({3-[(3-{[4-({4-[(4-{[4-({(2R)-2-amino-4-[(1-methyl-4-{[1-methyl-4-({1-methyl-4-[(1-methyl-1H-imidazole-2-carbonyl)amino]-1H-imidazole-2-carbonyl}amino)-1H-pyrrole-2-carbonyl]amino}-1H-pyrrole-2-carbonyl)amino]butanoyl}amino)-1-methyl-1H-imidazole-2-carbonyl]amino}-1-methyl-1H-pyrrole-2-carbonyl)amino]-1-methyl-1H-pyrrole-2-carbonyl}amino)-1-methyl-1H-pyrrole-2-carbonyl]amino}propyl)(methyl)amino]propyl}carbamoyl)benzoic acid, ACETATE ION, non-template DNA, ...
著者Oh, J, Dervan, P.B, Wang, D.
登録日2021-07-20
公開日2022-01-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献RNA polymerase II trapped on a molecular treadmill: Structural basis of persistent transcriptional arrest by a minor groove DNA binder.
Proc.Natl.Acad.Sci.USA, 119, 2022
2MT4
DownloadVisualize
BU of 2mt4 by Molmil
Solution structure of the N-terminal domain of NUSA from B. Subtilis
分子名称: Transcription termination/antitermination protein NusA
著者Mobli, M, Lewis, P.J.
登録日2014-08-12
公開日2015-02-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献RNA polymerase-induced remodelling of NusA produces a pause enhancement complex.
Nucleic Acids Res., 43, 2015
1SH3
DownloadVisualize
BU of 1sh3 by Molmil
Crystal Structure of Norwalk Virus Polymerase (MgSO4 crystal form)
分子名称: MAGNESIUM ION, RNA Polymerase
著者Ng, K.K, Pendas-Franco, N, Rojo, J, Boga, J.A, Machin, A, Alonso, J.M, Parra, F.
登録日2004-02-24
公開日2004-03-09
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal structure of norwalk virus polymerase reveals the carboxyl terminus in the active site cleft.
J.Biol.Chem., 279, 2004
1ZH5
DownloadVisualize
BU of 1zh5 by Molmil
Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen
分子名称: 5'-R(*UP*GP*CP*UP*GP*UP*UP*UP*U)-3', Lupus La protein, SULFATE ION
著者Teplova, M, Yuan, Y.R, Ilin, S, Malinina, L, Phan, A.T, Teplov, A, Patel, D.J.
登録日2005-04-22
公開日2006-01-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Basis for Recognition and Sequestration of UUU(OH) 3' Temini of Nascent RNA Polymerase III Transcripts by La, a Rheumatic Disease Autoantigen.
Mol.Cell, 21, 2006
1ONV
DownloadVisualize
BU of 1onv by Molmil
NMR Structure of a Complex Containing the TFIIF Subunit RAP74 and the RNAP II CTD Phosphatase FCP1
分子名称: Transcription initiation factor IIF, alpha subunit, serine phosphatase FCP1a
著者Nguyen, B.D, Abbott, K.L, Potempa, K, Kobor, M.S, Archambault, J, Greenblatt, J, Legault, P, Omichinski, J.G.
登録日2003-03-02
公開日2003-05-20
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR Structure of a Complex Containing the TFIIF Subunit RAP74 and the RNA polymerase II carboxyl-terminal domain phosphatase FCP1
Proc.Natl.Acad.Sci.USA, 100, 2003
4GP7
DownloadVisualize
BU of 4gp7 by Molmil
Polynucleotide kinase
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CITRIC ACID, MAGNESIUM ION, ...
著者Wang, L.K, Das, U, Smith, P, Shuman, S.
登録日2012-08-20
公開日2012-11-14
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and mechanism of the polynucleotide kinase component of the bacterial Pnkp-Hen1 RNA repair system.
Rna, 18, 2012
4GP6
DownloadVisualize
BU of 4gp6 by Molmil
Polynucleotide kinase
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Metallophosphoesterase
著者Wang, L.K, Das, U, Smith, P, Shuman, S.
登録日2012-08-20
公開日2012-11-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and mechanism of the polynucleotide kinase component of the bacterial Pnkp-Hen1 RNA repair system.
Rna, 18, 2012
4AEP
DownloadVisualize
BU of 4aep by Molmil
HCV-JFH1 NS5B POLYMERASE STRUCTURE AT 1.8 ANGSTROM
分子名称: PHOSPHATE ION, RNA-DIRECTED RNA POLYMERASE
著者Caillet-Saguy, C, Bressanelli, S.
登録日2012-01-12
公開日2012-05-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Two Crucial Early Steps in RNA Synthesis by the Hepatitis C Virus Polymerase Involve a Dual Role of Residue 405.
J.Virol., 86, 2012
4AEX
DownloadVisualize
BU of 4aex by Molmil
HCV-JFH1 NS5B POLYMERASE STRUCTURE AT 2.4 ANGSTROM in a primitive orthorhombic space group
分子名称: PHOSPHATE ION, RNA-DIRECTED RNA POLYMERASE
著者Caillet-Saguy, C, Bressanelli, S.
登録日2012-01-12
公開日2012-05-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Two Crucial Early Steps in RNA Synthesis by the Hepatitis C Virus Polymerase Involve a Dual Role of Residue 405.
J.Virol., 86, 2012
2NAX
DownloadVisualize
BU of 2nax by Molmil
Structure of CCHC zinc finger domain of Pcf11
分子名称: Protein PCF11, ZINC ION
著者Yang, F, Varani, G.
登録日2016-01-12
公開日2016-11-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The C terminus of Pcf11 forms a novel zinc-finger structure that plays an essential role in mRNA 3'-end processing.
RNA, 23, 2017
4BJJ
DownloadVisualize
BU of 4bjj by Molmil
Sfc1-Sfc7 dimerization module
分子名称: MERCURY (II) ION, TRANSCRIPTION FACTOR TAU SUBUNIT SFC1, TRANSCRIPTION FACTOR TAU SUBUNIT SFC7
著者Taylor, N.M.I, Baudin, F, von Scheven, G, Muller, C.W.
登録日2013-04-18
公開日2013-07-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献RNA Polymerase III-Specific General Transcription Factor Iiic Contains a Heterodimer Resembling Tfiif RAP30/RAP74.
Nucleic Acids Res., 41, 2013
4BJI
DownloadVisualize
BU of 4bji by Molmil
Sfc1-DBD
分子名称: TRANSCRIPTION FACTOR TAU SUBUNIT SFC1
著者Taylor, N.M.I, Baudin, F, von Scheven, G, Muller, C.W.
登録日2013-04-18
公開日2013-07-31
最終更新日2013-11-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献RNA Polymerase III-Specific General Transcription Factor Iiic Contains a Heterodimer Resembling Tfiif RAP30/RAP74.
Nucleic Acids Res., 41, 2013
2LLI
DownloadVisualize
BU of 2lli by Molmil
Low resolution structure of RNA-binding subunit of the TRAMP complex
分子名称: Protein AIR2, ZINC ION
著者Holub, P, Lalakova, J, Cerna, H, Sarazova, M, Pasulka, J, Hrazdilova, K, Arce, M.S, Stefl, R, Vanacova, S.
登録日2011-11-10
公開日2012-03-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Air2p is critical for the assembly and RNA-binding of the TRAMP complex and the KOW domain of Mtr4p is crucial for exosome activation.
Nucleic Acids Res., 40, 2012
2VY7
DownloadVisualize
BU of 2vy7 by Molmil
The 627-domain from influenza A virus polymerase PB2 subunit
分子名称: POLYMERASE BASIC PROTEIN 2
著者Tarendeau, F, Crepin, T, Guilligay, D, Ruigrok, R, Cusack, S, Hart, D.
登録日2008-07-18
公開日2008-09-09
最終更新日2012-06-06
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Host Determinant Residue Lysine 627 Lies on the Surface of a Discrete, Folded Domain of Influenza Virus Polymerase Pb2 Subunit
Plos Pathog., 4, 2008
2VY6
DownloadVisualize
BU of 2vy6 by Molmil
Two domains from the C-terminal region of influenza A virus polymerase PB2 subunit
分子名称: POLYMERASE BASIC PROTEIN 2
著者Tarendeau, F, Crepin, T, Guilligay, D, Ruigrok, R, Cusack, S, Hart, D.
登録日2008-07-18
公開日2008-09-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Host Determinant Residue Lysine 627 Lies on the Surface of a Discrete, Folded Domain of Influenza Virus Polymerase Pb2 Subunit
Plos Pathog., 4, 2008
4IKA
DownloadVisualize
BU of 4ika by Molmil
Crystal structure of EV71 3Dpol-VPg
分子名称: 3Dpol, NICKEL (II) ION, VPg
著者Chen, C, Wang, Y.X, Lou, Z.Y.
登録日2012-12-25
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of enterovirus 71 RNA-dependent RNA polymerase complexed with its protein primer VPg: implication for a trans mechanism of VPg uridylylation
J.Virol., 87, 2013
8Z85
DownloadVisualize
BU of 8z85 by Molmil
Cryo-EM structure of Thogoto virus polymerase in transcription pre-initiation conformation 1
分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-R(*AP*GP*AP*GP*AP*AP*AP*UP*CP*AP*AP*GP*GP*CP*AP*GP*UP*U)-3'), ...
著者Xue, L, Chang, T, Li, Z, Zhao, H, Li, M, He, J, Chen, X, Xiong, X.
登録日2024-04-21
公開日2024-05-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Cryo-EM structures of Thogoto virus polymerase reveal unique RNA transcription and replication mechanisms among orthomyxoviruses.
Nat Commun, 15, 2024
8Z8N
DownloadVisualize
BU of 8z8n by Molmil
Cryo-EM structure of Thogoto virus polymerase in transcription pre-initiation conformation 3
分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-R(*AP*GP*AP*GP*AP*AP*AP*UP*CP*AP*AP*GP*GP*CP*AP*GP*UP*U)-3'), ...
著者Xue, L, Chang, T, Li, Z, Zhao, H, Li, M, He, J, Chen, X, Xiong, X.
登録日2024-04-22
公開日2024-05-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Cryo-EM structures of Thogoto virus polymerase reveal unique RNA transcription and replication mechanisms among orthomyxoviruses.
Nat Commun, 15, 2024
8Z9R
DownloadVisualize
BU of 8z9r by Molmil
Cryo-EM structure of Thogoto virus polymerase in a replication elongation-reception conformation
分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-D(*(ATP))-R(P*GP*CP*AP*AP*AP*AP*AP*CP*A)-3'), ...
著者Xue, L, Chang, T, Li, Z, Zhao, H, Li, M, He, J, Chen, X, Xiong, X.
登録日2024-04-23
公開日2024-05-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Cryo-EM structures of Thogoto virus polymerase reveal unique RNA transcription and replication mechanisms among orthomyxoviruses.
Nat Commun, 15, 2024
8Z8J
DownloadVisualize
BU of 8z8j by Molmil
Cryo-EM structure of Thogoto virus polymerase in transcription pre-initiation conformation 2
分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-R(*AP*GP*AP*GP*AP*AP*AP*UP*CP*AP*AP*GP*GP*CP*AP*GP*UP*U)-3'), ...
著者Xue, L, Chang, T, Li, Z, Zhao, H, Li, M, He, J, Chen, X, Xiong, X.
登録日2024-04-22
公開日2024-05-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Cryo-EM structures of Thogoto virus polymerase reveal unique RNA transcription and replication mechanisms among orthomyxoviruses.
Nat Commun, 15, 2024

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon