Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2BCW
DownloadVisualize
BU of 2bcw by Molmil
Coordinates of the N-terminal domain of ribosomal protein L11,C-terminal domain of ribosomal protein L7/L12 and a portion of the G' domain of elongation factor G, as fitted into cryo-em map of an Escherichia coli 70S*EF-G*GDP*fusidic acid complex
分子名称: 50S ribosomal protein L11, 50S ribosomal protein L7/L12, Elongation factor G
著者Datta, P.P, Sharma, M.R, Qi, L, Frank, J, Agrawal, R.K.
登録日2005-10-19
公開日2005-12-20
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (11.2 Å)
主引用文献Interaction of the G' Domain of Elongation Factor G and the C-Terminal Domain of Ribosomal Protein L7/L12 during Translocation as Revealed by Cryo-EM.
Mol.Cell, 20, 2005
1K9M
DownloadVisualize
BU of 1k9m by Molmil
Co-crystal structure of tylosin bound to the 50S ribosomal subunit of Haloarcula marismortui
分子名称: 23S RRNA, 5S RRNA, CADMIUM ION, ...
著者Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
登録日2001-10-29
公開日2002-07-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
4BSZ
DownloadVisualize
BU of 4bsz by Molmil
Crystal Structure of the Yeast Ribosomal Protein Rps3 in Complex with its Chaperone Yar1
分子名称: 40S RIBOSOMAL PROTEIN S3, ANKYRIN REPEAT-CONTAINING PROTEIN YAR1
著者Holzer, S, Ban, N, Klinge, S.
登録日2013-06-12
公開日2013-09-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.842 Å)
主引用文献Crystal Structure of the Yeast Ribosomal Protein Rps3 in Complex with its Chaperone Yar1
J.Mol.Biol., 425, 2013
1KD1
DownloadVisualize
BU of 1kd1 by Molmil
Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui
分子名称: 23S RRNA, 5S RRNA, CADMIUM ION, ...
著者Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
登録日2001-11-12
公開日2002-07-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
1M1K
DownloadVisualize
BU of 1m1k by Molmil
Co-crystal structure of azithromycin bound to the 50S ribosomal subunit of Haloarcula marismortui
分子名称: 23S RRNA, 5S RRNA, AZITHROMYCIN, ...
著者Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
登録日2002-06-19
公開日2002-07-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
1FG0
DownloadVisualize
BU of 1fg0 by Molmil
LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND
分子名称: 23S RIBOSOMAL RNA, 5'-R(CCGGCGGGCUGGUUCAAACCGGCCCGCCGGACC)-3'-5'-R(P-PUROMYCIN)-3'
著者Nissen, P, Hansen, J, Ban, N, Moore, P.B, Steitz, T.A.
登録日2000-07-26
公開日2000-08-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structural basis of ribosome activity in peptide bond synthesis.
Science, 289, 2000
4ZOX
DownloadVisualize
BU of 4zox by Molmil
Crystal structure of the Saccharomyces cerevisiae Sqt1 bound to the N-terminus of the ribosomal protein L10
分子名称: 60S ribosomal protein L10, Ribosome assembly protein SQT1
著者Pausch, P, Altegoer, F, Bange, G.
登録日2015-05-07
公開日2015-07-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Co-translational capturing of nascent ribosomal proteins by their dedicated chaperones.
Nat Commun, 6, 2015
4V9F
DownloadVisualize
BU of 4v9f by Molmil
The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins
分子名称: 23S Ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
著者Gabdulkhakov, A.
登録日2012-11-02
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.404 Å)
主引用文献Revisiting the Haloarcula marismortui 50S ribosomal subunit model.
Acta Crystallogr.,Sect.D, 69, 2013
5TQB
DownloadVisualize
BU of 5tqb by Molmil
Crystal structure of assembly chaperone of ribosomal protein L4 (Acl4) in complex with ribosomal protein L4 (RpL4)
分子名称: 1,2-ETHANEDIOL, 60S ribosomal protein L4-like protein, Assembly chaperone of ribosomal protein L4 (Acl4), ...
著者Huber, F.M, Hoelz, A.
登録日2016-10-23
公開日2017-02-15
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis for protection of ribosomal protein L4 from cellular degradation.
Nat Commun, 8, 2017
2QEX
DownloadVisualize
BU of 2qex by Molmil
Negamycin Binds to the Wall of the Nascent Chain Exit Tunnel of the 50S Ribosomal Subunit
分子名称: 23S ribosomal RNA, 50S ribosomal protein L10e, 50S ribosomal protein L11P, ...
著者Schroeder, S.J, Blaha, G.
登録日2007-06-26
公開日2008-09-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Negamycin binds to the wall of the nascent chain exit tunnel of the 50S ribosomal subunit.
Antimicrob.Agents Chemother., 51, 2007
4BTS
DownloadVisualize
BU of 4bts by Molmil
THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
分子名称: 18S ribosomal RNA, 40S RIBOSOMAL PROTEIN RACK1, 40S RIBOSOMAL PROTEIN RPS10E, ...
著者Weisser, M, Voigts-Hoffmann, F, Rabl, J, Leibundgut, M, Ban, N.
登録日2013-06-19
公開日2013-07-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.703 Å)
主引用文献The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A.
Nat. Struct. Mol. Biol., 20, 2013
1QVF
DownloadVisualize
BU of 1qvf by Molmil
Structure of a deacylated tRNA minihelix bound to the E site of the large ribosomal subunit of Haloarcula marismortui
分子名称: 23S ribosomal rna, 50S RIBOSOMAL PROTEIN L10E, 50S ribosomal protein L13P, ...
著者Schmeing, T.M, Moore, P.B, Steitz, T.A.
登録日2003-08-27
公開日2003-11-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of deacylated tRNA mimics bound to the E site of the large ribosomal subunit
RNA, 9, 2003
1QVG
DownloadVisualize
BU of 1qvg by Molmil
Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui
分子名称: 23S ribosomal rna, 50S RIBOSOMAL PROTEIN L10E, 50S ribosomal protein L13P, ...
著者Schmeing, T.M, Moore, P.B, Steitz, T.A.
登録日2003-08-27
公開日2003-11-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of deacylated tRNA mimics bound to the E site of the large ribosomal subunit
RNA, 9, 2003
1ZHO
DownloadVisualize
BU of 1zho by Molmil
The structure of a ribosomal protein L1 in complex with mRNA
分子名称: 50S ribosomal protein L1, POTASSIUM ION, mRNA
著者Nevskaya, N, Tishchenko, S, Volchkov, S, Kljashtorny, V, Nikonova, E, Nikonov, O, Nikulin, A, Kohrer, C, Piendl, W, Zimmermann, R, Stockley, P, Garber, M, Nikonov, S.
登録日2005-04-26
公開日2006-05-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献New insights into the interaction of ribosomal protein L1 with RNA.
J.Mol.Biol., 355, 2006
3JCS
DownloadVisualize
BU of 3jcs by Molmil
2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
分子名称: 26S alpha ribosomal RNA, 26S delta ribosomal RNA, 26S epsilon ribosomal RNA, ...
著者Shalev-Benami, M, Zhang, Y, Matzov, D, Halfon, Y, Zackay, A, Rozenberg, H, Zimmerman, E, Bashan, A, Jaffe, C.L, Yonath, A, Skiniotis, G.
登録日2016-01-21
公開日2016-07-20
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献2.8- angstrom Cryo-EM Structure of the Large Ribosomal Subunit from the Eukaryotic Parasite Leishmania.
Cell Rep, 16, 2016
5NRG
DownloadVisualize
BU of 5nrg by Molmil
The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 23S ribosomal RNA, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Yonath, A, Matzov, D, Eyal, Z, Ben Hamou, R, Zimmerman, E, Rozenberg, H, Bashan, A, Fridman, M.
登録日2017-04-23
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.442 Å)
主引用文献Structural insights of lincosamides targeting the ribosome of Staphylococcus aureus.
Nucleic Acids Res., 45, 2017
1XBP
DownloadVisualize
BU of 1xbp by Molmil
Inhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with Tiamulin
分子名称: 23S RIBOSOMAL RNA, 50S ribosomal protein L11, 50S ribosomal protein L13, ...
著者Schluenzen, F, Pyetan, E, Fucini, P, Yonath, A, Harms, J.M.
登録日2004-08-31
公開日2005-03-01
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Inhibition of peptide bond formation by pleuromutilins: the structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with tiamulin.
Mol.Microbiol., 54, 2004
5NPM
DownloadVisualize
BU of 5npm by Molmil
CRYSTAL STRUCTURE OF MUTANT RIBOSOMAL PROTEIN TTHL1 LACKING 8 N-TERMINAL RESIDUES IN COMPLEX WITH 80NT 23S RNA FROM THERMUS THERMOPHILUS
分子名称: 23S ribosomal RNA, 50S ribosomal protein L1, MALONATE ION, ...
著者Gabdulkhakov, A.G, Tishchenko, T.V, Nevskaya, N.A, Nikonov, S.V, Garber, M.B.
登録日2017-04-17
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献[Influence of Nonconserved Regions of L1 Protuberance of Thermus thermophilus Ribosome on the Affinity of L1 Protein to 23s rRNA].
Mol.Biol.(Moscow), 52, 2018
8BH6
DownloadVisualize
BU of 8bh6 by Molmil
Mature 30S ribosomal subunit from Staphylococcus aureus
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Garaeva, N, Fatkhullin, B, Jenner, L, Soufari, H, Yusupov, M, Usachev, K.
登録日2022-10-30
公開日2023-09-20
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Ribosome maturation factor P (RimP) from Staphylococcus aureus
Structure, 2023
1FKA
DownloadVisualize
BU of 1fka by Molmil
STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Schluenzen, F, Tocilj, A, Zarivach, R, Harms, J, Gluehmann, M, Janell, D, Bashan, A, Bartels, H, Agmon, I, Franceschi, F, Yonath, A.
登録日2000-08-09
公開日2000-09-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution.
Cell(Cambridge,Mass.), 102, 2000
1NJN
DownloadVisualize
BU of 1njn by Molmil
The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycin
分子名称: 23S ribosomal RNA, SPARSOMYCIN
著者Bashan, A, Agmon, I, Zarivatch, R, Schluenzen, F, Harms, J.M, Berisio, R, Bartels, H, Hansen, H.A, Yonath, A.
登録日2003-01-02
公開日2003-02-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural basis of the ribosomal machinery for Peptide bond formation, translocation, and nascent chain progression
Mol.Cell, 11, 2003
7KWG
DownloadVisualize
BU of 7kwg by Molmil
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Belinite, M, Khusainov, I, Marzi, S, Romby, P, Yusupov, M, Hashem, Y.
登録日2020-11-30
公開日2021-01-27
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Stabilization of Ribosomal RNA of the Small Subunit by Spermidine in Staphylococcus aureus .
Front Mol Biosci, 8, 2021
1NKW
DownloadVisualize
BU of 1nkw by Molmil
Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans
分子名称: 23S ribosomal RNA, 50S ribosomal protein L11, 50S ribosomal protein L13, ...
著者Harms, J.M, Schluenzen, F, Zarivach, R, Bashan, A, Gat, S, Agmon, I, Bartels, H, Franceschi, F, Yonath, A.
登録日2003-01-05
公開日2003-02-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献High resolution structure of the large ribosomal subunit from a mesophilic eubacterium
Cell(Cambridge,Mass.), 107, 2001
1C04
DownloadVisualize
BU of 1c04 by Molmil
IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 A MAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI
分子名称: 23S RRNA FRAGMENT, RIBOSOMAL PROTEIN L11, RIBOSOMAL PROTEIN L14, ...
著者Ban, N, Nissen, P, Capel, M, Moore, P.B, Steitz, T.A.
登録日1999-07-14
公開日1999-08-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
Nature, 400, 1999
3BNQ
DownloadVisualize
BU of 3bnq by Molmil
Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the Presence of SrCl2 (A1555G mutant, Br-derivative)
分子名称: A site of human mitochondrial ribosome, A chain, B chain, ...
著者Kondo, J, Westhof, E.
登録日2007-12-14
公開日2008-06-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates
Nucleic Acids Res., 36, 2008

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon