PDB: 1507 件ウェブページステータス検索Chemie searchBIRD

---

7OJX	E2 UBE2K covalently linked to donor Ub, acceptor di-Ub, and RING E3 primed for K48-linked Ub chain synthesis 分子名称: 1,1'-ethane-1,2-diylbis(1H-pyrrole-2,5-dione), E3 ubiquitin-protein ligase RNF38, Polyubiquitin-B, ... 著者 Majorek, K.A, Nakasone, M.A, Huang, D.T. 登録日 2021-05-17 公開日 2022-01-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of UBE2K-Ub/E3/polyUb reveals mechanisms of K48-linked Ub chain extension. Nat.Chem.Biol., 18, 2022
7ONI	Structure of Neddylated CUL5 C-terminal region-RBX2-ARIH2* 分子名称: Cullin-5, E3 ubiquitin-protein ligase ARIH2, NEDD8, ... 著者 Kostrhon, S.P, prabu, J.R, Schulman, B.A. 登録日 2021-05-25 公開日 2021-09-15 最終更新日 2021-10-06 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 CUL5-ARIH2 E3-E3 ubiquitin ligase structure reveals cullin-specific NEDD8 activation. Nat.Chem.Biol., 17, 2021
7P47	Structure of the E3 ligase Smc5/Nse2 in complex with Ubc9-SUMO thioester mimetic 分子名称: E3 SUMO-protein ligase MMS21, SUMO-conjugating enzyme UBC9, Structural maintenance of chromosomes protein 5, ... 著者 Lascorz, J, Varejao, N, Reverter, D. 登録日 2021-07-09 公開日 2021-11-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.314 Å) 主引用文献 Structural basis for the E3 ligase activity enhancement of yeast Nse2 by SUMO-interacting motifs. Nat Commun, 12, 2021
7OSA	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands 分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0, ... 著者 Djumagulov, M, Jenner, L, Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G. 登録日 2021-06-08 公開日 2021-12-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Accuracy mechanism of eukaryotic ribosome translocation. Nature, 600, 2021
7OSM	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands 分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0, ... 著者 Djumagulov, M, Jenner, L, Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G. 登録日 2021-06-09 公開日 2021-12-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Accuracy mechanism of eukaryotic ribosome translocation. Nature, 600, 2021
7OLD	Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state 分子名称: 18S rRNA, 26S rRNA, 40S ribosomal protein S0, ... 著者 Kisonaite, M, Wild, K, Sinning, I. 登録日 2021-05-19 公開日 2022-01-26 最終更新日 2022-02-09 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 High-resolution structures of a thermophilic eukaryotic 80S ribosome reveal atomistic details of translocation. Nat Commun, 13, 2022
7O80	Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ... 著者 Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N. 登録日 2021-04-14 公開日 2021-06-02 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome. Science, 372, 2021
7O81	Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ... 著者 Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N. 登録日 2021-04-14 公開日 2021-06-02 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome. Science, 372, 2021
7O7Z	Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot) 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ... 著者 Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N. 登録日 2021-04-14 公開日 2021-06-02 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome. Science, 372, 2021
7OLC	Thermophilic eukaryotic 80S ribosome at idle POST state 分子名称: 18S rRNA, 26S rRNA, 40S ribosomal protein S0, ... 著者 Kisonaite, M, Wild, K, Sinning, I. 登録日 2021-05-19 公開日 2022-01-26 最終更新日 2022-04-06 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 High-resolution structures of a thermophilic eukaryotic 80S ribosome reveal atomistic details of translocation. Nat Commun, 13, 2022
7NWI	Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S 分子名称: 18S ribosomal RNA, 28S ribosomal RNA+BlaS, 40S ribosomal protein S11, ... 著者 Powers, K.T, Yadav, S.K.N, Bufton, J.C, Schaffitzel, C. 登録日 2021-03-16 公開日 2021-07-07 最終更新日 2023-01-11 実験手法 ELECTRON MICROSCOPY (3.13 Å) 主引用文献 Blasticidin S inhibits mammalian translation and enhances production of protein encoded by nonsense mRNA. Nucleic Acids Res., 49, 2021
7NWG	Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S. 分子名称: 18S Ribosomal RNA, 28S Ribosomal RNA, 40S ribosomal protein S10, ... 著者 Powers, K.T, Yadav, S.K.N, Bufton, J.C, Schaffitzel, C. 登録日 2021-03-16 公開日 2021-07-07 最終更新日 2023-01-11 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Blasticidin S inhibits mammalian translation and enhances production of protein encoded by nonsense mRNA. Nucleic Acids Res., 49, 2021
7NWH	Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S. 分子名称: 18S Ribosomal RNA, 28S Ribosomal RNA, 40S ribosomal protein S10, ... 著者 Powers, K.T, Yadav, S.K.N, Bufton, J.C, Schaffitzel, C. 登録日 2021-03-16 公開日 2021-07-07 最終更新日 2023-01-11 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Blasticidin S inhibits mammalian translation and enhances production of protein encoded by nonsense mRNA. Nucleic Acids Res., 49, 2021
7OYB	Cryo-EM structure of the 6 hpf zebrafish embryo 80S ribosome 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ... 著者 Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A. 登録日 2021-06-24 公開日 2022-07-13 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 A molecular network of conserved factors keeps ribosomes dormant in the egg. Nature, 613, 2023
7OYA	Cryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ... 著者 Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A. 登録日 2021-06-24 公開日 2022-07-13 最終更新日 2023-02-08 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 A molecular network of conserved factors keeps ribosomes dormant in the egg. Nature, 613, 2023
7OYD	Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ... 著者 Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A. 登録日 2021-06-24 公開日 2022-07-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.3 Å) 主引用文献 A molecular network of conserved factors keeps ribosomes dormant in the egg. Nature, 613, 2023
7OYC	Cryo-EM structure of the Xenopus egg 80S ribosome 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A. 登録日 2021-06-24 公開日 2022-07-20 最終更新日 2023-02-08 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 A molecular network of conserved factors keeps ribosomes dormant in the egg. Nature, 613, 2023
5XY3	Large subunit of Trichomonas vaginalis ribosome 分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... 著者 Li, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N. 登録日 2017-07-06 公開日 2017-08-30 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii Cell Res., 27, 2017
5XXU	Small subunit of Toxoplasma gondii ribosome 分子名称: 18S RNA, Ribosomal protein eL41, Ribosomal protein eS1, ... 著者 LI, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N. 登録日 2017-07-05 公開日 2017-08-30 最終更新日 2018-10-24 実験手法 ELECTRON MICROSCOPY (3.35 Å) 主引用文献 Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii Cell Res., 27, 2017
5WYJ	Cryo-EM structure of the 90S small subunit pre-ribosome (Dhr1-depleted, Enp1-TAP, state 1) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S ribosomal RNA, 40S ribosomal protein S1-A, ... 著者 Ye, K, Zhu, X, Sun, Q. 登録日 2017-01-13 公開日 2017-03-29 最終更新日 2019-10-09 実験手法 ELECTRON MICROSCOPY (8.7 Å) 主引用文献 Molecular architecture of the 90S small subunit pre-ribosome. Elife, 6, 2017
5Z58	Cryo-EM structure of a human activated spliceosome (early Bact) at 4.9 angstrom. 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ... 著者 Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y. 登録日 2018-01-17 公開日 2018-09-19 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 Structure of the human activated spliceosome in three conformational states. Cell Res., 28, 2018
5Z56	cryo-EM structure of a human activated spliceosome (mature Bact) at 5.1 angstrom. 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ... 著者 Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y. 登録日 2018-01-17 公開日 2018-09-19 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (5.1 Å) 主引用文献 Structure of the human activated spliceosome in three conformational states. Cell Res., 28, 2018
5ZBU	Crystal Structure of PA-TM-RING E3 ligase RNF13 RING domain in complex with E2~Ub 分子名称: E3 ubiquitin-protein ligase RNF13, Ubiquitin, Ubiquitin-conjugating enzyme E2 D2, ... 著者 Datta, A.B, Sarkar, S. 登録日 2018-02-12 公開日 2019-02-27 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal Structure of PA-TM-RING E3 ligase RNF13 RING domain in complex with E2~Ub To Be Published
5Z57	Cryo-EM structure of the human activated spliceosome (late Bact) at 6.5 angstrom 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ALANINE, BUD13 homolog, ... 著者 Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y. 登録日 2018-01-17 公開日 2018-09-19 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (6.5 Å) 主引用文献 Structure of the human activated spliceosome in three conformational states. Cell Res., 28, 2018
6AH0	The Cryo-EM Structure of the Precusor of Human Pre-catalytic Spliceosome (pre-B complex) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ... 著者 Zhan, X, Yan, C, Zhang, X, Shi, Y. 登録日 2018-08-15 公開日 2018-11-14 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (5.7 Å) 主引用文献 Structures of the human pre-catalytic spliceosome and its precursor spliceosome. Cell Res., 28, 2018

<46474849505152535455565758596061>