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3SQ3
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Crystal Structure Analysis of the Yeast Tyrosyl-DNA Phosphodiesterase H182A Mutant
分子名称: Tyrosyl-DNA phosphodiesterase 1
著者Gajewski, S, White, S.W.
登録日2011-07-04
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Analysis of the active-site mechanism of tyrosyl-DNA phosphodiesterase I: a member of the phospholipase D superfamily.
J.Mol.Biol., 415, 2012
1S0W
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1b Lactamse/ b Lactamase Inhibitor
分子名称: Beta-lactamase inhibitory protein, CALCIUM ION, beta-lactamase TEM
著者Schreiber, G, Reichman, D, Israel Structural Proteomics Center (ISPC)
登録日2004-01-05
公開日2004-02-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The modular architecture of protein-protein binding interfaces.
Proc.Natl.Acad.Sci.USA, 102, 2005
5LG8
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Human L-type ferritin iron loaded for 60 minutes
分子名称: CADMIUM ION, FE (III) ION, Ferritin light chain, ...
著者Pozzi, C, Di Pisa, F, Mangani, S.
登録日2016-07-06
公開日2017-02-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Chemistry at the protein-mineral interface in L-ferritin assists the assembly of a functional ( mu (3)-oxo)Tris[( mu (2)-peroxo)] triiron(III) cluster.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UPK
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CDC42 binds PAK4 via an extended GTPase-effector interface - 3 peptide: PAK4cat, PAK4-N45, CDC42
分子名称: Cell division control protein 42 homolog, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Ha, B.H, Boggon, T.J.
登録日2017-02-03
公開日2017-12-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献CDC42 binds PAK4 via an extended GTPase-effector interface.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5A6V
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Open and closed conformations and protonation states of Candida antarctica Lipase B: Xenon complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ISOPROPYL ALCOHOL, LIPASE B, ...
著者Stauch, B, Fisher, S.J, Cianci, M.
登録日2015-07-01
公開日2015-10-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Open and Closed States of Candida Antarctica Lipase B: Protonation and the Mechanism of Interfacial Activation.
J.Lipid Res., 56, 2015
4HAG
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Crystal structure of fc-fragment of human IgG2 antibody (centered crystal form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-2 chain C region
著者Teplyakov, A, Malia, T, Obmolova, G, Zhao, Y, Gilliland, G.
登録日2012-09-26
公開日2013-06-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献IgG2 Fc structure and the dynamic features of the IgG CH2-CH3 interface.
Mol.Immunol., 56, 2013
5A71
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Open and closed conformations and protonation states of Candida antarctica Lipase B: atomic resolution native
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ISOPROPYL ALCOHOL, LIPASE B, ...
著者Stauch, B, Fisher, S.J, Cianci, M.
登録日2015-07-02
公開日2015-10-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (0.91 Å)
主引用文献Open and Closed States of Candida Antarctica Lipase B: Protonation and the Mechanism of Interfacial Activation.
J.Lipid Res., 56, 2015
3N5E
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Crystal Structure of human thymidylate synthase bound to a peptide inhibitor
分子名称: SULFATE ION, Synthetic peptide LR, Thymidylate synthase
著者Pozzi, C, Cardinale, D, Guaitoli, G, Tondi, D, Luciani, R, Myllykallio, H, Ferrari, S, Costi, M.P, Mangani, S.
登録日2010-05-25
公開日2011-06-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Protein-protein interface-binding peptides inhibit the cancer therapy target human thymidylate synthase.
Proc.Natl.Acad.Sci.USA, 108, 2011
2P49
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Complex of a camelid single-domain vhh antibody fragment with RNASE A at 1.4A resolution: native mono_1 crystal form
分子名称: ANTIBODY CAB-RN05, PHOSPHATE ION, Ribonuclease pancreatic
著者Tereshko, V, Uysal, S, Margalef, K, Koide, A, Kossiakoff, A.A, Koide, S.
登録日2007-03-11
公開日2007-08-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Exploring the capacity of minimalist protein interfaces: interface energetics and affinity maturation to picomolar KD of a single-domain antibody with a flat paratope.
J.Mol.Biol., 373, 2007
4HAF
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Crystal structure of fc-fragment of human IgG2 antibody (primitive crystal form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-2 chain C region
著者Teplyakov, A, Malia, T, Obmolova, G, Zhao, Y, Gilliland, G.
登録日2012-09-26
公開日2013-06-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献IgG2 Fc structure and the dynamic features of the IgG CH2-CH3 interface.
Mol.Immunol., 56, 2013
3N5G
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BU of 3n5g by Molmil
Crystal Structure of histidine-tagged human thymidylate synthase
分子名称: SULFATE ION, Thymidylate synthase
著者Pozzi, C, Cardinale, D, Guaitoli, G, Tondi, D, Luciani, R, Myllykallio, H, Ferrari, S, Costi, M.P, Mangani, S.
登録日2010-05-25
公開日2011-06-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Protein-protein interface-binding peptides inhibit the cancer therapy target human thymidylate synthase.
Proc.Natl.Acad.Sci.USA, 108, 2011
1FWK
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CRYSTAL STRUCTURE OF HOMOSERINE KINASE COMPLEXED WITH ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, HOMOSERINE KINASE, MAGNESIUM ION
著者Zhou, T, Daugherty, M, Grishin, N.V, Osterman, A.L, Zhang, H.
登録日2000-09-22
公開日2000-12-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and mechanism of homoserine kinase: prototype for the GHMP kinase superfamily.
Structure Fold.Des., 8, 2000
2P4A
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BU of 2p4a by Molmil
X-ray structure of a camelid affinity matured single-domain vhh antibody fragment in complex with RNASE A
分子名称: ANTIBODY CAB-RN05, Ribonuclease pancreatic, SULFATE ION
著者Tereshko, V, Koide, A, Uysal, S, Koide, S.
登録日2007-03-11
公開日2007-08-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Exploring the capacity of minimalist protein interfaces: interface energetics and affinity maturation to picomolar KD of a single-domain antibody with a flat paratope.
J.Mol.Biol., 373, 2007
1FWL
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BU of 1fwl by Molmil
CRYSTAL STRUCTURE OF HOMOSERINE KINASE
分子名称: HOMOSERINE KINASE
著者Zhou, T, Daugherty, M, Grishin, N.V, Osterman, A.L, Zhang, H.
登録日2000-09-22
公開日2000-12-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure and mechanism of homoserine kinase: prototype for the GHMP kinase superfamily.
Structure Fold.Des., 8, 2000
2Q1D
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2-keto-3-deoxy-D-arabinonate dehydratase complexed with magnesium and 2,5-dioxopentanoate
分子名称: 2,5-DIOXOPENTANOIC ACID, 2-keto-3-deoxy-D-arabinonate dehydratase, MAGNESIUM ION
著者Barends, T, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
登録日2007-05-24
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.
J.Mol.Biol., 379, 2008
2Q1C
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2-keto-3-deoxy-D-arabinonate dehydratase complexed with calcium and 2-oxobutyrate
分子名称: 2-KETOBUTYRIC ACID, 2-keto-3-deoxy-D-arabinonate dehydratase, CALCIUM ION
著者Barends, T, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
登録日2007-05-24
公開日2008-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.
J.Mol.Biol., 379, 2008
2Q19
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2-keto-3-deoxy-D-arabinonate dehydratase apo form
分子名称: 2-keto-3-deoxy-D-arabinonate dehydratase
著者Barends, T, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
登録日2007-05-24
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.
J.Mol.Biol., 379, 2008
5Y52
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BU of 5y52 by Molmil
Crystal Structure of Highly Active BTUO Mutant P287G Improved by Humidity Control at 83% RH
分子名称: 1,2-ETHANEDIOL, 8-AZAXANTHINE, OXYGEN MOLECULE, ...
著者Itoh, T, Kishimoto, T, Nishiya, Y.
登録日2017-08-07
公開日2018-08-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Conformational Flexibility of Plastic Interface Loop Allows Entropic Adaptation of Urate Oxidase to Environmental pH
To Be Published
4W8Q
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Crystal structure of truncated hemolysin A from P. mirabilis at 1.4 Angstroms resolution
分子名称: Hemolysin
著者Novak, W.R.P, Glasgow, E, Thompson, J.R, Weaver, T.M.
登録日2014-08-26
公開日2015-07-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.428 Å)
主引用文献Proteolysis of truncated hemolysin A yields a stable dimerization interface.
Acta Crystallogr F Struct Biol Commun, 73, 2017
4UX3
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cohesin Smc3-HD:Scc1-N complex from yeast
分子名称: MAGNESIUM ION, MITOTIC CHROMOSOME DETERMINANT-RELATED PROTEIN, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gligoris, T.G, Nasmyth, K, Lowe, J.
登録日2014-08-18
公開日2014-12-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Closing the Cohesin Ring: Structure and Function of its Smc3-Kleisin Interface.
Science, 346, 2014
1QHI
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BU of 1qhi by Molmil
HERPES SIMPLEX VIRUS TYPE-I THYMIDINE KINASE COMPLEXED WITH A NOVEL NON-SUBSTRATE INHIBITOR, 9-(4-HYDROXYBUTYL)-N2-PHENYLGUANINE
分子名称: 9-(4-HYDROXYBUTYL)-N2-PHENYLGUANINE, PROTEIN (THYMIDINE KINASE), SULFATE ION
著者Bennett, M.S, Wien, F, Champness, J.N, Batuwangala, T, Rutherford, T, Summers, W.C, Sun, H, Wright, G, Sanderson, M.R.
登録日1999-05-12
公開日1999-07-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure to 1.9 A resolution of a complex with herpes simplex virus type-1 thymidine kinase of a novel, non-substrate inhibitor: X-ray crystallographic comparison with binding of aciclovir.
FEBS Lett., 443, 1999
5Y2P
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Crystal Structure of Bacillus sp. TB-90 Urate Oxidase Improved by Humidity Control at 89% RH
分子名称: 1,2-ETHANEDIOL, 8-AZAXANTHINE, OXYGEN MOLECULE, ...
著者Itoh, T, Nishiya, Y.
登録日2017-07-26
公開日2018-08-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Conformational Flexibility of Plastic Interface Loop Allows Entropic Adaptation of Urate Oxidase to Environmental pH.
To Be Published
6P7L
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1.8 Angstrom structure of Aln2 from Streptomyces sp. CM020
分子名称: Aln2, GLYCEROL
著者Vuksanovic, N, Silvaggi, N.R.
登録日2019-06-06
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural characterization of three noncanonical NTF2-like superfamily proteins: implications for polyketide biosynthesis.
Acta Crystallogr.,Sect.F, 76, 2020
5XRX
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EFK17DA structure in Microgel MAA60
分子名称: Cathelicidin antimicrobial peptide
著者Datta, A, Bhunia, A.
登録日2017-06-10
公開日2018-04-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Conformational Aspects of High Content Packing of Antimicrobial Peptides in Polymer Microgels
ACS Appl Mater Interfaces, 9, 2017
6PQ1
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Structure of the Fremyella diplosiphon OCP1
分子名称: Orange carotenoid-binding protein, beta,beta-carotene-4,4'-dione
著者Sutter, M, Dominguez-Martin, M.A, Bao, H, Kerfeld, C.A.
登録日2019-07-08
公開日2020-05-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Comparative ultrafast spectroscopy and structural analysis of OCP1 and OCP2 from Tolypothrix.
Biochim Biophys Acta Bioenerg, 1861, 2020

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件を2024-08-07に公開中

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