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PDB: 31 results

3HM3
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BU of 3hm3 by Molmil
The Structure and conformation of Lys-63 linked tetra-ubiquitin
Descriptor: Ubiquitin, ZINC ION
Authors:Datta, A.B, Hura, G.L, Wolberger, C.
Deposit date:2009-05-28
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:The structure and conformation of Lys63-linked tetraubiquitin.
J.Mol.Biol., 392, 2009
5ZC4
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BU of 5zc4 by Molmil
Crystal Structure of RNF13 RING domain
Descriptor: E3 ubiquitin-protein ligase RNF13, ZINC ION
Authors:Datta, A.B, Sarkar, S.
Deposit date:2018-02-14
Release date:2019-02-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.906 Å)
Cite:Crystal Structure of RNF13 RING domain
To Be Published
5ZBU
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BU of 5zbu by Molmil
Crystal Structure of PA-TM-RING E3 ligase RNF13 RING domain in complex with E2~Ub
Descriptor: E3 ubiquitin-protein ligase RNF13, Ubiquitin, Ubiquitin-conjugating enzyme E2 D2, ...
Authors:Datta, A.B, Sarkar, S.
Deposit date:2018-02-12
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of PA-TM-RING E3 ligase RNF13 RING domain in complex with E2~Ub
To Be Published
1XWR
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BU of 1xwr by Molmil
Crystal structure of the coliphage lambda transcription activator protein CII
Descriptor: ISOPROPYL ALCOHOL, Regulatory protein CII
Authors:Datta, A.B, Panjikar, S, Weiss, M.S, Chakrabarti, P, Parrack, P.
Deposit date:2004-11-02
Release date:2005-06-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structure of {lambda} CII: Implications for recognition of direct-repeat DNA by an unusual tetrameric organization
Proc.Natl.Acad.Sci.USA, 102, 2005
5WRX
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BU of 5wrx by Molmil
VG13P structure in LPS
Descriptor: analogue peptide VG13P
Authors:Datta, A, Bhunia, A.
Deposit date:2016-12-04
Release date:2017-05-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural and Dynamic Insights into a Glycine-Mediated Short Analogue of a Designed Peptide in Lipopolysaccharide Micelles: Correlation Between Compact Structure and Anti-Endotoxin Activity.
Biochemistry, 56, 2017
5XRX
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BU of 5xrx by Molmil
EFK17DA structure in Microgel MAA60
Descriptor: Cathelicidin antimicrobial peptide
Authors:Datta, A, Bhunia, A.
Deposit date:2017-06-10
Release date:2018-04-18
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Conformational Aspects of High Content Packing of Antimicrobial Peptides in Polymer Microgels
ACS Appl Mater Interfaces, 9, 2017
6M0U
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BU of 6m0u by Molmil
Structure of AhSYMRK kinase domain mutant - K625E
Descriptor: CACODYLATE ION, CALCIUM ION, Symbiosis receptor kinase SymRK, ...
Authors:Datta, A.B, Naskar, P.
Deposit date:2020-02-22
Release date:2021-02-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure of AhSYMRK kinase domain mutant - K625E
To Be Published
5XNG
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EFK17A structure in Microgel MAA60
Descriptor: Cathelicidin antimicrobial peptide
Authors:Datta, A, Bhunia, A.
Deposit date:2017-05-22
Release date:2018-04-18
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Conformational Aspects of High Content Packing of Antimicrobial Peptides in Polymer Microgels
ACS Appl Mater Interfaces, 9, 2017
2NCW
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BU of 2ncw by Molmil
NMR structure of WWWKYE21 structure in LPS micelles
Descriptor: Heparin cofactor 2
Authors:Datta, A, Bhunia, A.
Deposit date:2016-04-18
Release date:2017-03-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Tryptophan end-tagging for promoted lipopolysaccharide interactions and anti-inflammatory effects.
Sci Rep, 7, 2017
2NCU
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NMR structure of KYE21 in LPS micelles
Descriptor: Heparin cofactor 2
Authors:Datta, A, Bhunia, A, Malmsten, M.
Deposit date:2016-04-18
Release date:2017-03-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Tryptophan end-tagging for promoted lipopolysaccharide interactions and anti-inflammatory effects.
Sci Rep, 7, 2017
2N65
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BU of 2n65 by Molmil
Disulphide linked homodimer of designed antimicrobial peptide VG16KRKP
Descriptor: antimicrobial peptide VG16KRKP
Authors:Datta, A, Bhunia, A.
Deposit date:2015-08-12
Release date:2016-03-23
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Designing potent antimicrobial peptides by disulphide linked dimerization and N-terminal lipidation to increase antimicrobial activity and membrane perturbation: Structural insights into lipopolysaccharide binding.
J Colloid Interface Sci, 461, 2016
2NCV
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BU of 2ncv by Molmil
NMR structure of RWS21 structure in LPS micelles
Descriptor: Heparin cofactor 2
Authors:Datta, A, Bhunia, A.
Deposit date:2016-04-18
Release date:2017-04-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Effects of N-Terminal Modifications of the Anti-Inflammatory Peptide KYE21 on Lipopolysaccharide and Membrane Interactions
To be Published
3BT8
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BU of 3bt8 by Molmil
Crystal Structure of Mutant Cyclophilin (R147A) from Leishmania donovani
Descriptor: Peptidyl-prolyl cis-trans isomerase
Authors:Venugopal, V, Sen, B, Datta, A.K, Banerjee, R.
Deposit date:2007-12-28
Release date:2008-01-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Mutant Cyclophilin from Leishmania Donovani
To be Published
4S1E
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BU of 4s1e by Molmil
Crystal structure of cyclophilin mutant L120A from Leishmania donovani at 2.22 angstrom.
Descriptor: Peptidyl-prolyl cis-trans isomerase
Authors:Roy, S, Datta, A.K, Banerjee, R.
Deposit date:2015-01-13
Release date:2015-03-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Characterization and prediction of thermal stability of cyclophilin mutants from L.donovani
To be Published
4S1J
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BU of 4s1j by Molmil
Crystal structure of cyclophilin mutant V33A from Leishmania donovani at 2.3 angstrom.
Descriptor: Peptidyl-prolyl cis-trans isomerase
Authors:Roy, S, Datta, A.K, Banerjee, R.
Deposit date:2015-01-14
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Characterization and prediction of thermal stability of cyclophilin mutants from L.donovani
To be Published
3EOV
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BU of 3eov by Molmil
Crystal structure of cyclophilin from Leishmania donovani ligated with cyclosporin A
Descriptor: CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Authors:Venugopal, V, Dasgupta, D, Datta, A.K, Banerjee, R.
Deposit date:2008-09-29
Release date:2008-11-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Cyclophilin from Leishmania Donovani Bound to Cyclosporin at 2.6 A Resolution: Correlation between Structure and Thermodynamic Data.
Acta Crystallogr.,Sect.D, 65, 2009
4K2E
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BU of 4k2e by Molmil
HlyU from Vibrio cholerae N16961
Descriptor: Transcriptional activator HlyU
Authors:Mukherjee, D, Datta, A.B, Chakrabarti, P.
Deposit date:2013-04-09
Release date:2014-04-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of HlyU, the hemolysin gene transcription activator, from Vibrio cholerae N16961 and functional implications.
Biochim.Biophys.Acta, 1844, 2014
2HAQ
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BU of 2haq by Molmil
Crystal Structure of Cyclophilin A from Leishmania Donovani
Descriptor: Cyclophilin
Authors:Venugopal, V, Sen, B, Datta, A.K, Banerjee, R.
Deposit date:2006-06-13
Release date:2006-06-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structure of cyclophilin from Leishmania donovani at 1.97 A resolution.
Acta Crystallogr.,Sect.F, 63, 2007
6L2B
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BU of 6l2b by Molmil
Crystal structure of cyclophilin mutant I164M from Leishmania donovani at 2.65 angstrom resolution
Descriptor: Peptidyl-prolyl cis-trans isomerase
Authors:Ghosh, S, Biswas, G, Datta, A.K, Banerjee, R.
Deposit date:2019-10-03
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of cyclophilin mutant I164M from Leishmania donovani at 2.65 angstrom resolution.
To Be Published
5YWR
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BU of 5ywr by Molmil
Crystal Structure of RING E3 ligase ZNRF1 in complex with Ube2N (Ubc13)
Descriptor: E3 ubiquitin-protein ligase ZNRF1, FORMIC ACID, TRIETHYLENE GLYCOL, ...
Authors:Behera, A.P, Naskar, P, Datta, A.B.
Deposit date:2017-11-30
Release date:2018-06-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural insights into the nanomolar affinity of RING E3 ligase ZNRF1 for Ube2N and its functional implications.
Biochem. J., 475, 2018
3MHS
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BU of 3mhs by Molmil
Structure of the SAGA Ubp8/Sgf11/Sus1/Sgf73 DUB module bound to ubiquitin aldehyde
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Protein SUS1, ...
Authors:Samara, N.L, Datta, A.B, Berndsen, C.E, Zhang, X, Yao, T, Cohen, R.E, Wolberger, C.
Deposit date:2010-04-08
Release date:2010-04-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural insights into the assembly and function of the SAGA deubiquitinating module.
Science, 328, 2010
3MHH
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BU of 3mhh by Molmil
Structure of the SAGA Ubp8/Sgf11/Sus1/Sgf73 DUB module
Descriptor: Protein SUS1, SAGA-associated factor 11, SAGA-associated factor 73, ...
Authors:Samara, N.L, Datta, A.B, Berndsen, C.E, Zhang, X, Yao, T, Cohen, R.E, Wolberger, C.
Deposit date:2010-04-08
Release date:2010-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural insights into the assembly and function of the SAGA deubiquitinating module.
Science, 328, 2010
2N63
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BU of 2n63 by Molmil
Structure of C4VG16KRKP
Descriptor: PENTANOIC ACID, antimicrobial peptide C4VG16KRKP
Authors:Bhunia, A, Datta, A.
Deposit date:2015-08-11
Release date:2016-03-23
Last modified:2024-01-24
Method:SOLUTION NMR
Cite:Designing potent antimicrobial peptides by disulphide linked dimerization and N-terminal lipidation to increase antimicrobial activity and membrane perturbation: Structural insights into lipopolysaccharide binding.
J Colloid Interface Sci, 461, 2016
4OOI
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BU of 4ooi by Molmil
Reduced HlyU from Vibrio cholerae N16961
Descriptor: Transcriptional activator HlyU
Authors:Mukherjee, D, Datta, A.B, Chakrabarti, P.
Deposit date:2014-02-03
Release date:2014-12-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of HlyU, the hemolysin gene transcription activator, from Vibrio cholerae N16961 and functional implications
Biochim.Biophys.Acta, 1844, 2014
2MWL
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BU of 2mwl by Molmil
NMR structure of VG16KRKP, an antimicrobial peptide in LPS
Descriptor: antimicrobial peptide
Authors:Bhunia, A, Datta, A.
Deposit date:2014-11-13
Release date:2014-12-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Antimicrobial Peptides: Insights into Membrane Permeabilization, Lipopolysaccharide Fragmentation and Application in Plant Disease Control.
Sci Rep, 5, 2015

 

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