PDB: 1361 件ウェブページステータス検索Chemie searchBIRD

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6W77	30S-Inactivated-high-Mg2+ Class A 分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ... 著者 Jahagirdar, D, Jha, V, Basu, B, Gomez-Blanco, J, Vargas, J, Ortega, J. 登録日 2020-03-18 公開日 2020-10-21 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy. Rna, 26, 2020
6VYW	Escherichia coli transcription-translation complex C3 (TTC-C3) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Wang, C, Su, M, Ebright, R.H. 登録日 2020-02-27 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (7 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
6W6P	MultiBody Refinement of 70S Ribosome from Enterococcus faecalis 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Jogl, G, Khayat, R. 登録日 2020-03-17 公開日 2020-10-14 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis. Sci Rep, 10, 2020
6VYX	Escherichia coli transcription-translation complex C4 (TTC-C4) containing mRNA with a 21 nt long spacer, transcription factor NusG, and fMet-tRNAs at P-site and E-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Wang, C, Su, M, Ebright, R.H. 登録日 2020-02-27 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (9.9 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
6WDC	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Loveland, A.B, Demo, G, Korostelev, A.A. 登録日 2020-03-31 公開日 2020-07-01 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WDE	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Loveland, A.B, Demo, G, Korostelev, A.A. 登録日 2020-03-31 公開日 2020-07-01 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WD6	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Loveland, A.B, Demo, G, Korostelev, A.A. 登録日 2020-03-31 公開日 2020-07-08 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6X7K	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Ebright, R.H, Wang, C, Su, M. 登録日 2020-05-30 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
6XDQ	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 30 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Ebright, R.H, Wang, C, Su, M. 登録日 2020-06-11 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
6X7F	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Ebright, R.H, Wang, C, Su, M. 登録日 2020-05-29 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
6XE0	Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment) 分子名称: 16s rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Washburn, R, Zuber, P, Sun, M, Hashem, Y, Shen, B, Li, W, Harvey, S, Acosta-Reyes, F.J, Knauer, S.H, Frank, J, Gottesman, M.E. 登録日 2020-06-11 公開日 2020-07-29 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (6.8 Å) 主引用文献 Escherichia coli NusG Links the Lead Ribosome with the Transcription Elongation Complex. Iscience, 23, 2020
6XHX	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with erythromycin and protein Y (YfiA) at 2.55A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ... 著者 Svetlov, M.S, Syroegin, E.A, Aleksandrova, E.V, Atkinson, G.C, Gregory, S.T, Mankin, A.S, Polikanov, Y.S. 登録日 2020-06-19 公開日 2020-12-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structure of Erm-modified 70S ribosome reveals the mechanism of macrolide resistance. Nat.Chem.Biol., 17, 2021
6XGF	Escherichia coli transcription-translation complex B (TTC-B) containing an 30 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Wang, C, Su, M, Ebright, R.H. 登録日 2020-06-17 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
4UER	40S-eIF1-eIF1A-eIF3-eIF3j translation initiation complex from Lachancea kluyveri 分子名称: 18S RRNA, EIF1, EIF1A, ... 著者 Aylett, C.H.S, Boehringer, D, Erzberger, J.P, Schaefer, T, Ban, N. 登録日 2014-12-18 公開日 2015-02-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (6.47 Å) 主引用文献 Structure of a Yeast 40S-Eif1-Eif1A-Eif3-Eif3J Initiation Complex Nat.Struct.Mol.Biol., 22, 2015
4V5Q	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome 分子名称: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Schmeing, T.M, Voorhees, R.M, Ramakrishnan, V. 登録日 2010-12-07 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 How Mutations in tRNA Distant from the Anticodon Affect the Fidelity of Decoding. Nat.Struct.Mol.Biol., 18, 2011
4V4B	Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. 分子名称: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S11, ... 著者 Spahn, C.M, Gomez-Lorenzo, M.G, Grassucci, R.A, Jorgensen, R, Andersen, G.R, Beckmann, R, Penczek, P.A, Ballesta, J.P.G, Frank, J. 登録日 2004-01-06 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (11.7 Å) 主引用文献 Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation. Embo J., 23, 2004
4V6C	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Zhang, W, Dunkle, J.A, Cate, J.H.D. 登録日 2009-06-27 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (3.19 Å) 主引用文献 Structures of the ribosome in intermediate States of ratcheting. Science, 325, 2009
4V6W	Structure of the D. melanogaster 80S ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ... 著者 Anger, A.M, Armache, J.-P, Berninghausen, O, Habeck, M, Subklewe, M, Wilson, D.N, Beckmann, R. 登録日 2013-02-27 公開日 2014-07-09 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (6 Å) 主引用文献 Structures of the human and Drosophila 80S ribosome. Nature, 497, 2013
4V7V	Crystal structure of the E. coli ribosome bound to clindamycin. 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Dunkle, J.A, Xiong, L, Mankin, A.S, Cate, J.H.D. 登録日 2010-08-16 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (3.2891 Å) 主引用文献 Structures of the Escherichia coli ribosome with antibiotics bound near the peptidyl transferase center explain spectra of drug action. Proc.Natl.Acad.Sci.USA, 107, 2010
4V52	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Borovinskaya, M.A, Pai, R.D, Zhang, W, Schuwirth, B.-S, Holton, J.M, Hirokawa, G, Kaji, H, Kaji, A, Cate, J.H.D. 登録日 2007-06-15 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Structural basis for aminoglycoside inhibition of bacterial ribosome recycling. Nat.Struct.Mol.Biol., 14, 2007
4V8G	Crystal structure of RMF bound to the 70S ribosome. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ... 著者 Polikanov, Y.S, Blaha, G.M, Steitz, T.A. 登録日 2011-12-11 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 How hibernation factors RMF, HPF, and YfiA turn off protein synthesis. Science, 336, 2012
4V5H	E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. 分子名称: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Seidelt, B, Innis, C.A, Wilson, D.N, Gartmann, M, Armache, J, Villa, E, Trabuco, L.G, Becker, T, Mielke, T, Schulten, K, Steitz, T.A, Beckmann, R. 登録日 2009-10-26 公開日 2014-07-09 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 Structural insight into nascent polypeptide chain-mediated translational stalling. Science, 326, 2009
4V90	Thermus thermophilus Ribosome 分子名称: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Chen, Y, Feng, S, Kumar, V, Ero, R, Gao, Y.G. 登録日 2014-02-22 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structure of EF-G-ribosome complex in a pretranslocation state. Nat. Struct. Mol. Biol., 20, 2013
4V9D	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Dunkle, J.A, Wang, L, Feldman, M.B, Pulk, A, Chen, V.B, Kapral, G.J, Noeske, J, Richardson, J.S, Blanchard, S.C, Cate, J.H.D. 登録日 2012-07-31 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structures of the bacterial ribosome in classical and hybrid states of tRNA binding. Science, 332, 2011
4V68	T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map. 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Schuette, J.-C, Spahn, C.M.T. 登録日 2008-12-11 公開日 2014-07-09 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (6.4 Å) 主引用文献 GTPase activation of elongation factor EF-Tu by the ribosome during decoding Embo J., 28, 2009

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