PDB: 10243 件ウェブページステータス検索Chemie searchBIRD

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6MFR	Human Argonaute2-miR-122 bound to a target RNA with three central mismatches (bu3) 分子名称: PHENOL, PHOSPHATE ION, Protein argonaute-2, ... 著者 Sheu-Gruttadauria, J, MacRae, I.J. 登録日 2018-09-12 公開日 2019-08-07 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structural Basis for Target-Directed MicroRNA Degradation. Mol.Cell, 75, 2019
6MFN	Human Argonaute2-miR-27a bound to HSUR1 target RNA 分子名称: PHENOL, Protein argonaute-2, RNA (5'-R(P*UP*CP*UP*GP*UP*GP*AP*UP*AP*A)-3'), ... 著者 Sheu-Gruttadauria, J, MacRae, I.J. 登録日 2018-09-11 公開日 2019-08-07 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural Basis for Target-Directed MicroRNA Degradation. Mol.Cell, 75, 2019
6NIT	Human Argonaute2-miR-122 bound to a target RNA with four central mismatches (bu4) 分子名称: Protein argonaute-2, RNA (5'-R(P*AP*AP*CP*AP*CP*CP*AP*UP*CP*CP*AP*AP*CP*AP*CP*UP*CP*CP*AP*AP*A)-3'), RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*UP*U)-3') 著者 Sheu-Gruttadauria, J, MacRae, I.J. 登録日 2018-12-31 公開日 2019-08-07 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Structural Basis for Target-Directed MicroRNA Degradation. Mol.Cell, 75, 2019
5M9D	Solution structure of Rtt103 CTD-interacting domain bound to a Ser2Ser7 phosphorylated CTD peptide 分子名称: Regulator of Ty1 transposition protein 103, THR-SER-PRO-SEP-TYR-SEP-PRO-THR-SER-PRO-SEP-TYR-SEP-PRO-THR-SER 著者 Jasnovidova, O, Kubicek, K, Stefl, R. 登録日 2016-11-01 公開日 2017-10-11 最終更新日 2024-11-20 実験手法 SOLUTION NMR 主引用文献 Structure and dynamics of the RNAPII CTDsome with Rtt103. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7OM7	Thosea asigna virus RdRP domain in complex with RNA and nucleotide UMPNPP 分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ... 著者 Ferrero, D.S, Falqui, M, Verdaguer, N. 登録日 2021-05-21 公開日 2021-07-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Snapshots of a Non-Canonical RdRP in Action. Viruses, 13, 2021
3OTC	Crystal structure of human tRNAHis guanylyltransferase (Thg1)- Native II 分子名称: tRNA(His) guanylyltransferase 著者 Hyde, S.J, Eckenroth, B.E, Doublie, S. 登録日 2010-09-11 公開日 2010-11-17 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 tRNAHis guanylyltransferase (THG1), a unique 3'-5' nucleotidyl transferase, shares unexpected structural homology with canonical 5'-3' DNA polymerases. Proc.Natl.Acad.Sci.USA, 107, 2010
4Z4D	Human Argonaute2 Bound to t1-G Target RNA 分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, PHENOL, ... 著者 Schirle, N.T, MacRae, I.J. 登録日 2015-04-02 公開日 2015-09-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets. Elife, 4, 2015
4Z4F	Human Argonaute2 Bound to t1-DAP Target RNA 分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ... 著者 Schirle, N.T, MacRae, I.J. 登録日 2015-04-02 公開日 2015-09-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets. Elife, 4, 2015
4Z4H	Human Argonaute2 A481T Mutant Bound to t1-A Target RNA 分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ... 著者 Schirle, N.T, MacRae, I.J. 登録日 2015-04-02 公開日 2015-09-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.504 Å) 主引用文献 Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets. Elife, 4, 2015
4Z4I	Human Argonaute2 A481T Mutant Bound to t1-G Target RNA 分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ... 著者 Schirle, N.T, MacRae, I.J. 登録日 2015-04-02 公開日 2015-09-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.801 Å) 主引用文献 Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets. Elife, 4, 2015
4Z4C	Human Argonaute2 Bound to t1-C Target RNA 分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, PHENOL, ... 著者 Schirle, N.T, MacRae, I.J. 登録日 2015-04-02 公開日 2015-09-23 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.303 Å) 主引用文献 Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets. Elife, 4, 2015
4Z4G	Human Argonaute2 Bound to t1-Inosine Target RNA 分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ... 著者 Schirle, N.T, MacRae, I.J. 登録日 2015-04-02 公開日 2015-09-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets. Elife, 4, 2015
4Z4E	Human Argonaute2 Bound to t1-U Target RNA 分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, PHENOL, ... 著者 Schirle, N.T, MacRae, I.J. 登録日 2015-04-02 公開日 2015-09-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets. Elife, 4, 2015
6K32	RdRp complex 分子名称: 2'-O-methyladenosine 5'-(dihydrogen phosphate), 7-METHYLGUANOSINE, DIPHOSPHATE, ... 著者 Li, X.W. 登録日 2019-05-16 公開日 2019-11-20 最終更新日 2025-07-02 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structure of RdRps Within a Transcribing dsRNA Virus Provides Insights Into the Mechanisms of RNA Synthesis. J.Mol.Biol., 432, 2020
5OMQ	Ternary complex of 9N DNA polymerase in the replicative state with three metal ions in the active site 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA Primer, DNA Template, ... 著者 Betz, K, Marx, A, Diederichs, K. 登録日 2017-08-01 公開日 2017-12-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.199 Å) 主引用文献 Crystal structures of ternary complexes of archaeal B-family DNA polymerases. PLoS ONE, 12, 2017
5OMV	Ternary complex of 9N DNA polymerase in the replicative state with two metal ions in the active site 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA polymerase, DNA primer, ... 著者 Betz, K, Marx, A, Diederichs, K. 登録日 2017-08-01 公開日 2017-12-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.003 Å) 主引用文献 Crystal structures of ternary complexes of archaeal B-family DNA polymerases. PLoS ONE, 12, 2017
4OI4	Protein complex of Clp1 bound to ATP and Mg2+ with Pcf11deltaN454deltaC563 of S. cerevisiae 分子名称: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... 著者 Dikfidan, A, Loll, B, Zeymer, C, Clausen, T, Meinhart, A. 登録日 2014-01-18 公開日 2014-05-14 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 RNA specificity and regulation of catalysis in the eukaryotic polynucleotide kinase clp1. Mol.Cell, 54, 2014
8B9I	Cryo-EM structure of MLE in complex with ADP:AlF4 and UUC RNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, Dosage compensation regulator, MAGNESIUM ION, ... 著者 Jagtap, P.K.A, Hennig, J. 登録日 2022-10-06 公開日 2023-10-18 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.95 Å) 主引用文献 Structural basis of RNA-induced autoregulation of the DExH-type RNA helicase maleless. Mol.Cell, 83, 2023
8B9G	Cryo-EM structure of MLE in complex with ADP:AlF4 and U10 RNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, Dosage compensation regulator, RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), ... 著者 Jagtap, P.K.A, Hennig, J. 登録日 2022-10-06 公開日 2023-10-18 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.86 Å) 主引用文献 Structural basis of RNA-induced autoregulation of the DExH-type RNA helicase maleless. Mol.Cell, 83, 2023
3JSB	Crystal structure of the N-terminal domain of the Lymphocytic Choriomeningitis Virus L protein 分子名称: RNA-directed RNA polymerase 著者 Morin, B, Jamal, S, Ferron, F.P, Coutard, B, Bricogne, G, Canard, B, Vonrhein, C, Marseilles Structural Genomics Program @ AFMB (MSGP) 登録日 2009-09-10 公開日 2010-09-15 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 The N-terminal domain of the arenavirus L protein is an RNA endonuclease essential in mRNA transcription Plos Pathog., 6, 2010
7QDY	RNA-bound human SKI complex 分子名称: Helicase SKI2W, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3'), Tetratricopeptide repeat protein 37, ... 著者 Koegel, A, Keidel, A, Bonneau, F, Schaefer, I.B, Conti, E. 登録日 2021-12-01 公開日 2022-02-09 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism. Mol.Cell, 82, 2022
8PJB	Cryo-EM structure of MLE in complex with UUC RNA and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, Dosage compensation regulator, MAGNESIUM ION, ... 著者 Jagtap, P.K.A, Hennig, J. 登録日 2023-06-23 公開日 2023-11-01 最終更新日 2025-07-02 実験手法 ELECTRON MICROSCOPY (3.62 Å) 主引用文献 Structural basis of RNA-induced autoregulation of the DExH-type RNA helicase maleless. Mol.Cell, 83, 2023
8PJJ	Cryo-EM structure of MLE in complex with SL7UUC RNA and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, Dosage compensation regulator, SL7UUC RNA 著者 Jagtap, P.K.A, Hennig, J. 登録日 2023-06-23 公開日 2023-11-22 最終更新日 2025-07-02 実験手法 ELECTRON MICROSCOPY (4.24 Å) 主引用文献 Structural basis of RNA-induced autoregulation of the DExH-type RNA helicase maleless. Mol.Cell, 83, 2023
3LLM	Crystal Structure Analysis of a RNA Helicase 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase A, CACODYLATE ION, ... 著者 Schutz, P, Karlberg, T, Collins, R, Arrowsmith, C.H, Berglund, H, Bountra, C, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Kraulis, P, Kotenyova, T, Kotzsch, A, Markova, N, Moche, M, Nielsen, T.K, Nordlund, P, Nyman, T, Persson, C, Roos, A.K, Siponen, M.I, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Wahlberg, E, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H.M, Structural Genomics Consortium (SGC) 登録日 2010-01-29 公開日 2010-05-12 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of human RNA helicase A (DHX9): structural basis for unselective nucleotide base binding in a DEAD-box variant protein. J.Mol.Biol., 400, 2010
4L87	Crystal structure of the human seryl-tRNA synthetase in complex with Ser-SA at 2.9 Angstrom resolution 分子名称: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Xu, X, Yang, X.-L. 登録日 2013-06-16 公開日 2013-10-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.897 Å) 主引用文献 Crystal Structure of Human Seryl-tRNA Synthetase and Ser-SA Complex Reveals a Molecular Lever Specific to Higher Eukaryotes. Structure, 21, 2013

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