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7Z8R
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CAND1-CUL1-RBX1
分子名称: Cullin-1, Cullin-associated NEDD8-dissociated protein 1, E3 ubiquitin-protein ligase RBX1, ...
著者Baek, K, Schulman, B.A.
登録日2022-03-18
公開日2023-04-19
最終更新日2023-05-10
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Systemwide disassembly and assembly of SCF ubiquitin ligase complexes.
Cell, 186, 2023
2LWJ
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BU of 2lwj by Molmil
NMR solution structure Myxoccoccus xanthus CdnL
分子名称: Transcriptional regulator, CarD family
著者Jimenez, M, Padmanabhan, S, Mirassou, Y.
登録日2012-08-01
公開日2014-02-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL.
Plos One, 9, 2014
7Z8V
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CAND1-SCF-SKP2 (SKP1deldel) CAND1 engaged SCF rocked
分子名称: Cullin-1, Cullin-associated NEDD8-dissociated protein 1, E3 ubiquitin-protein ligase RBX1, ...
著者Baek, K, Schulman, B.A.
登録日2022-03-18
公開日2023-04-19
最終更新日2023-05-10
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Systemwide disassembly and assembly of SCF ubiquitin ligase complexes.
Cell, 186, 2023
7Z8T
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BU of 7z8t by Molmil
CAND1-SCF-SKP2 CAND1 engaged SCF rocked
分子名称: Cullin-1, Cullin-associated NEDD8-dissociated protein 1, E3 ubiquitin-protein ligase RBX1, ...
著者Baek, K, Schulman, B.A.
登録日2022-03-18
公開日2023-04-19
最終更新日2023-05-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Systemwide disassembly and assembly of SCF ubiquitin ligase complexes.
Cell, 186, 2023
2CB3
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BU of 2cb3 by Molmil
Crystal structure of peptidoglycan recognition protein-LE in complex with tracheal cytotoxin (monomeric diaminopimelic acid-type peptidoglycan)
分子名称: GLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA, GLYCEROL, PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE
著者Lim, J.-H, Kim, M.-S, Oh, B.-H.
登録日2005-12-29
公開日2006-01-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for Preferential Recognition of Diaminopimelic Acid-Type Peptidoglycan by a Subset of Peptidoglycan Recognition Proteins
J.Biol.Chem., 281, 2006
7YNX
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BU of 7ynx by Molmil
Crystal structure of Pirh2 bound to poly-Ala peptide
分子名称: RING finger and CHY zinc finger domain-containing protein 1, SODIUM ION, SULFATE ION, ...
著者Dong, C, Yan, X, Li, Y.
登録日2022-08-01
公開日2023-04-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Recognition of an Ala-rich C-degron by the E3 ligase Pirh2.
Nat Commun, 14, 2023
6I9H
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BU of 6i9h by Molmil
Solution structure of TRIM28 RING domain
分子名称: Transcription intermediary factor 1-beta, ZINC ION
著者Stevens, R.V, Esposito, D, Rittinger, K.
登録日2018-11-23
公開日2019-05-01
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Characterisation of class VI TRIM RING domains: linking RING activity to C-terminal domain identity.
Life Sci Alliance, 2, 2019
6I9B
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BU of 6i9b by Molmil
NMR structure of the La module from human LARP4A
分子名称: La-related protein 4
著者Conte, M.R, Martino, L, Atkinson, R.A, Kelly, G, Cruz-Gallardo, I, De Tito, S, Trotta, R.
登録日2018-11-22
公開日2019-03-13
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献LARP4A recognizes polyA RNA via a novel binding mechanism mediated by disordered regions and involving the PAM2w motif, revealing interplay between PABP, LARP4A and mRNA.
Nucleic Acids Res., 47, 2019
7ZBW
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BU of 7zbw by Molmil
CAND1-SCF-SKP2 CAND1 rolling-2 SCF engaged
分子名称: Cullin-1, Cullin-associated NEDD8-dissociated protein 1, E3 ubiquitin-protein ligase RBX1, ...
著者Baek, K, Schulman, B.A.
登録日2022-03-24
公開日2023-04-19
最終更新日2023-05-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Systemwide disassembly and assembly of SCF ubiquitin ligase complexes.
Cell, 186, 2023
2M0E
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BU of 2m0e by Molmil
Solution Structure of Miz-1 zinc finger 6
分子名称: ZINC ION, Zinc finger and BTB domain-containing protein 17
著者Bernard, D, Bedard, M, Bilodeau, J, Lavigne, P.
登録日2012-10-24
公開日2012-11-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR Structure Note: Solution Structure of Miz-1 Zinc Fingers 5 to 7
To be Published
8HR1
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BU of 8hr1 by Molmil
Cryo-EM structure of SSX1 bound to the unmodified nucleosome at a resolution of 3.02 angstrom
分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
著者Zebin, T, Ai, H.S, Ziyu, X, Man, P, Liu, L.
登録日2022-12-14
公開日2023-09-13
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes.
Nat.Struct.Mol.Biol., 31, 2024
6J5S
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BU of 6j5s by Molmil
Crystal structure of human HINT1 mutant complexing with AP5A
分子名称: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ETHANESULFONIC ACID, Histidine triad nucleotide-binding protein 1
著者Wang, J, Fang, P, Guo, M.
登録日2019-01-11
公開日2019-09-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Second messenger Ap4A polymerizes target protein HINT1 to transduce signals in Fc epsilon RI-activated mast cells.
Nat Commun, 10, 2019
6J1Z
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BU of 6j1z by Molmil
WWP2 semi-open conformation
分子名称: NEDD4-like E3 ubiquitin-protein ligase WWP2
著者Liu, Z.H.
登録日2018-12-30
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A multi-lock inhibitory mechanism for fine-tuning enzyme activities of the HECT family E3 ligases.
Nat Commun, 10, 2019
8HQY
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BU of 8hqy by Molmil
Cryo-EM structure of SSX1 bound to the H2AK119Ub nucleosome at a resolution of 3.05 angstrom
分子名称: DNA (136-MER), DNA (137-MER), Histone H2A type 1-B/E, ...
著者Zebin, T, Ai, H.S, Ziyu, X, GuoChao, C, Man, P, Liu, L.
登録日2022-12-14
公開日2023-09-27
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes.
Nat.Struct.Mol.Biol., 31, 2024
7DG5
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BU of 7dg5 by Molmil
Crystal structure of mouse Smc1-Smc3 hinge domain containing a D574Y mutation
分子名称: Structural maintenance of chromosomes protein 1A, Structural maintenance of chromosomes protein 3
著者Seo, H, Noh, H, Oh, B.-H.
登録日2020-11-11
公開日2021-11-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Folding of cohesin's coiled coil is important for Scc2/4-induced association with chromosomes.
Elife, 10, 2021
7K06
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BU of 7k06 by Molmil
Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases
分子名称: CYTIDINE-5'-MONOPHOSPHATE, ERI1 exoribonuclease 3, MAGNESIUM ION
著者Thapar, R, Arvai, A.S, Tainer, J.A.
登録日2020-09-03
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3'- 5' exoribonucleases
To Be Published
1U4Q
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BU of 1u4q by Molmil
Crystal Structure of Repeats 15, 16 and 17 of Chicken Brain Alpha Spectrin
分子名称: Spectrin alpha chain, brain
著者Kusunoki, H, Minasov, G, MacDonald, R.I, Mondragon, A.
登録日2004-07-26
公開日2004-10-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Independent Movement, Dimerization and Stability of Tandem Repeats of Chicken Brain alpha-Spectrin
J.Mol.Biol., 344, 2004
5M32
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BU of 5m32 by Molmil
Human 26S proteasome in complex with Oprozomib
分子名称: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
著者Haselbach, D, Schrader, J, Lambrecht, F, Henneberg, F, Chari, A, Stark, H.
登録日2016-10-14
公開日2017-07-05
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Long-range allosteric regulation of the human 26S proteasome by 20S proteasome-targeting cancer drugs.
Nat Commun, 8, 2017
7K07
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BU of 7k07 by Molmil
Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases
分子名称: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, MANGANESE (II) ION
著者Thapar, R, Arvai, A.S, Tainer, J.A.
登録日2020-09-03
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3'- 5' exoribonucleases
To Be Published
7K05
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BU of 7k05 by Molmil
Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases
分子名称: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, GLYCEROL, ...
著者Thapar, R, Andrew, A.S, Tainer, J.A.
登録日2020-09-03
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3' - 5' exoribonucleases
To Be Published
2MBH
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BU of 2mbh by Molmil
NMR structure of EKLF(22-40)/Ubiquitin Complex
分子名称: Krueppel-like factor 1, Ubiquitin
著者Raiola, L, Omichinski, J.G.
登録日2013-07-31
公開日2013-10-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Characterization of a Noncovalent Complex between Ubiquitin and the Transactivation Domain of the Erythroid-Specific Factor EKLF.
Structure, 21, 2013
7DLV
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BU of 7dlv by Molmil
shrimp dUTPase in complex with Stl
分子名称: CALCIUM ION, Orf20, SULFATE ION, ...
著者Ma, Q, Wang, F.
登録日2020-11-30
公開日2021-12-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.525 Å)
主引用文献Structural basis of staphylococcal Stl inhibition on a eukaryotic dUTPase.
Int.J.Biol.Macromol., 184, 2021
4DUQ
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BU of 4duq by Molmil
The Structure of Ca2+-loaded S100A2 at 1.3A resolution
分子名称: CALCIUM ION, POLYETHYLENE GLYCOL (N=34), Protein S100-A2
著者Koch, M, Fritz, G.
登録日2012-02-22
公開日2012-03-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The structure of Ca2+-loaded S100A2 at 1.3- angstrom resolution.
Febs J., 279, 2012
2M68
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BU of 2m68 by Molmil
NMR solution structure ensemble of 3-4D mutant domain 11 IGF2R in complex with IGF2 (domain 11 structure only)
分子名称: Insulin-like growth factor 2 receptor variant
著者Strickland, M, Williams, C, Richards, E, Minnall, L, Crump, M.P, Frago, S, Hughes, J, Garner, L, Hoppe, H, Rezgui, D, Zaccheo, O.J, Prince, S.N, Hassan, A.B, Whittaker, S.
登録日2013-03-27
公開日2014-10-15
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Functional evolution of IGF2:IGF2R domain 11 binding generates novel structural interactions and a specific IGF2 antagonist.
Proc.Natl.Acad.Sci.USA, 113, 2016
2M9Y
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BU of 2m9y by Molmil
Solution Structure of the Catalytic Domain of HHARI
分子名称: E3 ubiquitin-protein ligase ARIH1, ZINC ION
著者Mercier, P, Spratt, D.E, Shaw, G.S.
登録日2013-06-24
公開日2013-11-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the HHARI catalytic domain shows glimpses of a HECT E3 ligase.
Plos One, 8, 2013

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