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7U0Q
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SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-02
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Patel, A, Ortlund, E.
登録日2022-02-18
公開日2023-03-01
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献Molecular basis of SARS-CoV-2 Omicron variant evasion from shared neutralizing antibody response.
Structure, 31, 2023
8DK7
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Crystal structure of theophylline aptamer soaked with TAL2
分子名称: FAB heavy chain, FAB light chain, RNA (34-MER)
著者Menichelli, E, Spraggon, G.
登録日2022-07-04
公開日2022-11-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Discovery of small molecules that target a tertiary-structured RNA.
Proc.Natl.Acad.Sci.USA, 119, 2022
7U0X
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SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-13
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Patel, A, Ortlund, E.
登録日2022-02-19
公開日2023-03-01
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3.82 Å)
主引用文献Molecular basis of SARS-CoV-2 Omicron variant evasion from shared neutralizing antibody response.
Structure, 31, 2023
8AVQ
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AO75L in Complex with UDP-Xylose
分子名称: 1,2-ETHANEDIOL, AO75L, BICINE, ...
著者Laugeri, M.E, Speciale, I, Gimeno, A, Lin, S, Poveda, A, Lowary, T, Van Etten, J.L, Barbero, J.J, De Castro, C, Tonetti, M, Rojas, A.L.
登録日2022-08-26
公開日2023-09-06
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献AO75L in Complex with UDP-Xylose
To Be Published
8ALO
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Heterodimer formation of sensory domains of Vibrio cholerae regulators ToxR and ToxS
分子名称: Cholera toxin transcriptional activator, Transmembrane regulatory protein ToxS
著者Gubensaek, N, Sagmeister, T, Pavkov-Keller, T, Zangger, K, Buhlheller, C, Wagner, G.E.
登録日2022-08-01
公開日2023-09-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献Vibrio cholerae's ToxRS bile sensing system.
Elife, 12, 2023
7A06
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Structure of human CKa1 in complex with compound o
分子名称: 1,2-ETHANEDIOL, 1-[(4-phenylphenyl)methyl]-4-pyrrolidin-1-yl-pyridine, Choline kinase alpha
著者Serran-Aguilera, L, Mariotto, E, Rubbini, G, Castro Navas, F.C, Marco, C, Carrasco-Jimenez, M.P, Ballarotto, M, Macchiarulo, A, Hurtado-Guerrero, R, Viola, G, Lopez-Cara, L.C.
登録日2020-08-06
公開日2020-09-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Synthesis, biological evaluation, in silico modeling and crystallization of novel small monocationic molecules with potent antiproliferative activity by dual mechanism.
Eur.J.Med.Chem., 207, 2020
7U6J
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HalB with lysine and succinate
分子名称: Halogenase B, LYSINE, SUCCINIC ACID
著者Sumida, K.H, Neugebauer, M.E, Kissman, E.N, Chang, M.C.Y.
登録日2022-03-04
公開日2023-03-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Biocatalytic control of site-selectivity and chain length-selectivity in radical amino acid halogenases.
Proc.Natl.Acad.Sci.USA, 120, 2023
6P41
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Yeast cytochrome c peroxidase (W191Y:L232E) in complex with iso-1 cytochrome c
分子名称: Cytochrome c iso-1, Cytochrome c peroxidase, mitochondrial, ...
著者Yee, E.F, Crane, B.R.
登録日2019-05-25
公開日2019-10-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Tuning Radical Relay Residues by Proton Management Rescues Protein Electron Hopping.
J.Am.Chem.Soc., 141, 2019
7U6H
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HalD with ornithine and alpha-ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Swenson, C.V, Neugebauer, M.E, Kissman, E.N, Chang, M.C.Y.
登録日2022-03-04
公開日2023-03-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Biocatalytic control of site-selectivity and chain length-selectivity in radical amino acid halogenases.
Proc.Natl.Acad.Sci.USA, 120, 2023
7TVI
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BU of 7tvi by Molmil
Alpha1/BetaB Heteromeric Glycine Receptor in Glycine-Bound State
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCINE, Glycine receptor beta subunit 2, ...
著者Gibbs, E, Chakrapani, S, Kumar, A.
登録日2022-02-04
公開日2023-03-22
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Conformational transitions and allosteric modulation in a heteromeric glycine receptor
Nat Commun, 14, 2023
6P66
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The crystal structure of the XPB complex with Bax1 from Archaeoglobus fulgidus at 3.0 Angstrom resolution
分子名称: CHLORIDE ION, DNA endonuclease Bax1, DNA repair protein RAD25
著者DuPrez, K.T, Fan, L, Hilario, E.
登録日2019-06-03
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis of the XPB-Bax1 complex as a dynamic helicase-nuclease machinery for DNA repair.
Nucleic Acids Res., 48, 2020
7U6I
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HalB with glycine and succinate
分子名称: GLYCEROL, GLYCINE, Halogenase B, ...
著者Neugebauer, M.E, Kissman, E.N, Chang, M.C.Y.
登録日2022-03-04
公開日2023-03-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Biocatalytic control of site-selectivity and chain length-selectivity in radical amino acid halogenases.
Proc.Natl.Acad.Sci.USA, 120, 2023
6MDS
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BU of 6mds by Molmil
Crystal structure of Streptococcus pyogenes endo-beta-N-acetylglucosaminidase (EndoS2) with complex biantennary glycan
分子名称: CALCIUM ION, Endo-beta-N-acetylglucosaminidase, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Klontz, E.H, Trastoy, B, Orwenyo, J, Wang, L.X, Guerin, M.E, Sundberg, E.J.
登録日2018-09-05
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular Basis of Broad SpectrumN-Glycan Specificity and Processing of Therapeutic IgG Monoclonal Antibodies by Endoglycosidase S2.
ACS Cent Sci, 5, 2019
7AB1
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BU of 7ab1 by Molmil
Crystal structure of MerTK kinase domain in complex with Gilteritinib
分子名称: 6-ethyl-3-[[3-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]amino]-5-(oxan-4-ylamino)pyrazine-2-carboxamide, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Pflug, A, Schimpl, M, McCoull, W, Nissink, J.W.M, Overman, R.C, Rawlins, P.B, Truman, C, Underwood, E, Warwicker, J, Winter-Holt, J.
登録日2020-09-05
公開日2020-10-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献A-loop interactions in Mer tyrosine kinase give rise to inhibitors with two-step mechanism and long residence time of binding.
Biochem.J., 477, 2020
7TU9
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BU of 7tu9 by Molmil
Alpha1/BetaB Heteromeric Glycine Receptor in Strychnine-Bound State
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycine receptor beta subunit 2, ...
著者Gibbs, E, Kumar, A, Chakrapani, S.
登録日2022-02-02
公開日2023-03-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Conformational transitions and allosteric modulation in a heteromeric glycine receptor
Nat Commun, 14, 2023
5MDX
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BU of 5mdx by Molmil
Cryo-EM structure of the PSII supercomplex from Arabidopsis thaliana
分子名称: CHLOROPHYLL A, CHLOROPHYLL B, Chlorophyll a-b binding protein 1, ...
著者van Bezouwen, L.S, Caffarri, S, Kale, R.S, Kouril, R, Thunnissen, A.M.W.H, Oostergetel, G.T, Boekema, E.J.
登録日2016-11-13
公開日2017-06-21
最終更新日2019-04-24
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献Subunit and chlorophyll organization of the plant photosystem II supercomplex.
Nat Plants, 3, 2017
8AK4
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BU of 8ak4 by Molmil
Structure of the C-terminally truncated NAD+-dependent DNA ligase from the poly-extremophile Deinococcus radiodurans
分子名称: DNA ligase, MANGANESE (II) ION, ZINC ION
著者Fernandes, A, Williamson, A.K, Matias, P.M, Moe, E.
登録日2022-07-29
公開日2023-09-27
実験手法X-RAY DIFFRACTION (3.36 Å)
主引用文献Structure/function studies of the NAD + -dependent DNA ligase from the poly-extremophile Deinococcus radiodurans reveal importance of the BRCT domain for DNA binding.
Extremophiles, 27, 2023
8AB5
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BU of 8ab5 by Molmil
Structure of E. coli GlpG in complex with peptide derived inhibitor Ac-VRHA-conh-[4-(4-butyl)-phenoxy-1-phenyl-2-butyl]
分子名称: Ac-VRHA-conh-[4-(4-butyl)-phenoxy-1-phenyl-2-butyl], Rhomboid protease GlpG
著者Skerlova, J, Polovinkin, V, Bach, K, Borshchevskiy, V, Strisovsky, K.
登録日2022-07-04
公開日2023-10-25
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Extensive targeting of chemical space at the prime side of ketoamide inhibitors of rhomboid proteases by branched substituents empowers their selectivity and potency.
Eur.J.Med.Chem., 275, 2024
6ZYV
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BU of 6zyv by Molmil
Structure of a Plasmodium PIR protein ectodomain
分子名称: CIR protein
著者Harrison, T.E, Higgins, M.K.
登録日2020-08-03
公開日2020-11-25
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure of the Plasmodium -interspersed repeat proteins of the malaria parasite.
Proc.Natl.Acad.Sci.USA, 117, 2020
8OEG
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BU of 8oeg by Molmil
PDE4B bound to MAPI compound 92a
分子名称: MAGNESIUM ION, ZINC ION, [(1~{S})-2-[3,5-bis(chloranyl)-1-oxidanyl-pyridin-4-yl]-1-(3,4-dimethoxyphenyl)ethyl] 5-[[[(1~{R})-2-[[(3~{R})-1-azabicyclo[2.2.2]octan-3-yl]oxy]-2-oxidanylidene-1-phenyl-ethyl]amino]methyl]thiophene-2-carboxylate, ...
著者Rizzi, A, Armani, E.
登録日2023-03-10
公開日2023-04-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Optimization of M 3 Antagonist-PDE4 Inhibitor (MAPI) Dual Pharmacology Molecules for the Treatment of COPD.
J.Med.Chem., 66, 2023
8ODW
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BU of 8odw by Molmil
Crystal structure of LbmA Ox-ACP didomain in complex with NADP and ethyl glycinate from the lobatamide PKS (Gynuella sunshinyii)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Francois, R.M.M, Fraley, A.E, Piel, J, Weissman, K.J, Gruez, A.
登録日2023-03-09
公開日2023-05-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献Modular Oxime Formation by a trans-AT Polyketide Synthase.
Angew.Chem.Int.Ed.Engl., 62, 2023
5MMS
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BU of 5mms by Molmil
Human cystathionine beta-synthase (CBS) p.P49L delta409-551 variant
分子名称: Cystathionine beta-synthase, PROTOPORPHYRIN IX CONTAINING FE, PYRIDOXAL-5'-PHOSPHATE, ...
著者Vicente, J.B, Colaco, H.G, Malagrino, F, Santo, P.E, Gutierres, A, Bandeiras, T.M, Leandro, P, Brito, J.A, Giuffre, A.
登録日2016-12-12
公開日2017-05-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A Clinically Relevant Variant of the Human Hydrogen Sulfide-Synthesizing Enzyme Cystathionine beta-Synthase: Increased CO Reactivity as a Novel Molecular Mechanism of Pathogenicity?
Oxid Med Cell Longev, 2017, 2017
8AZ3
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IAPP S20G growth-phase fibril polymorph 4PF-CU
分子名称: Islet amyloid polypeptide
著者Wilkinson, M, Xu, Y, Gallardo, R, Radford, S.E, Ranson, N.A.
登録日2022-09-05
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural evolution of fibril polymorphs during amyloid assembly.
Cell, 186, 2023
8AWT
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IAPP S20G lag-phase fibril polymorph 2PF-P
分子名称: Islet amyloid polypeptide
著者Wilkinson, M, Xu, Y, Gallardo, R, Radford, S.E, Ranson, N.A.
登録日2022-08-30
公開日2024-01-10
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural evolution of fibril polymorphs during amyloid assembly.
Cell, 186, 2023
8AZ5
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IAPP S20G plateau-phase fibril polymorph 4PF-CU
分子名称: Islet amyloid polypeptide
著者Wilkinson, M, Xu, Y, Gallardo, R, Radford, S.E, Ranson, N.A.
登録日2022-09-05
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Structural evolution of fibril polymorphs during amyloid assembly.
Cell, 186, 2023

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件を2024-10-16に公開中

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