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5XB5
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BU of 5xb5 by Molmil
Crystal structure of R90A mutant of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
分子名称: PHOSPHATE ION, Thymidylate kinase
著者Biswas, A, Jeyakanthan, J, Sekar, K.
登録日2017-03-15
公開日2017-06-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate.
FEBS J., 284, 2017
5XAI
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BU of 5xai by Molmil
dTMP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
分子名称: PHOSPHATE ION, THYMIDINE-5'-PHOSPHATE, Thymidylate kinase
著者Biswas, A, Jeyakanthan, J, Sekar, K.
登録日2017-03-13
公開日2017-06-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate
FEBS J., 284, 2017
1EFL
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HUMAN MALIC ENZYME IN A QUATERNARY COMPLEX WITH NAD, MG, AND TARTRONATE
分子名称: MAGNESIUM ION, MALIC ENZYME, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Yang, Z, Floyd, D.L, Loeber, G, Tong, L.
登録日2000-02-09
公開日2000-03-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of a closed form of human malic enzyme and implications for catalytic mechanism.
Nat.Struct.Biol., 7, 2000
6KHA
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BU of 6kha by Molmil
Solution structure of bovine insulin amyloid intermediate-2
分子名称: Insulin A chain, Insulin B chain
著者Ratha, B.N, Kar, R.K, Brender, J.B, Bhunia, A.
登録日2019-07-14
公開日2020-08-12
最終更新日2020-11-18
実験手法SOLUTION NMR
主引用文献High-resolution structure of a partially folded insulin aggregation intermediate.
Proteins, 88, 2020
6BOJ
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BU of 6boj by Molmil
Crystal Structure of the PDE4D Catalytic Domain and UCR2 Regulatory Helix with BPN5004
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(4-{[2-(3-chlorophenyl)-6-ethylpyrimidin-4-yl]methyl}phenyl)acetamide, CHLORIDE ION, ...
著者Fox III, D, Fairman, J.W, Gurney, M.E.
登録日2017-11-20
公開日2018-08-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Memory enhancing effects of BPN14770, an allosteric inhibitor of phosphodiesterase-4D, in wild-type and humanized mice.
Neuropsychopharmacology, 43, 2018
1PNF
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PNGASE F COMPLEX WITH DI-N-ACETYLCHITOBIOSE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL)ASPARAGINE AMIDASE F, SULFATE ION
著者Van Roey, P, Kuhn, P.
登録日1995-10-11
公開日1996-03-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Active site and oligosaccharide recognition residues of peptide-N4-(N-acetyl-beta-D-glucosaminyl)asparagine amidase F.
J.Biol.Chem., 270, 1995
5XB2
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BU of 5xb2 by Molmil
ADP-Mg-F-dTMP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
分子名称: ADENOSINE-5'-DIPHOSPHATE, FLUORIDE ION, MAGNESIUM ION, ...
著者Biswas, A, Jeyakanthan, J, Sekar, K.
登録日2017-03-15
公開日2017-06-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.161 Å)
主引用文献Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate
FEBS J., 284, 2017
6MGN
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BU of 6mgn by Molmil
mouse Id1 (51-104) - human hE47 (348-399) complex
分子名称: DNA-binding protein inhibitor ID-1, Transcription factor E2-alpha
著者Benezra, R, Pavletich, N.P, Gall, A.-L, Goldgur, Y.
登録日2018-09-14
公開日2019-09-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献A Small-Molecule Pan-Id Antagonist Inhibits Pathologic Ocular Neovascularization.
Cell Rep, 29, 2019
6MID
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Cryo-EM structure of the ZIKV virion in complex with Fab fragments of the potently neutralizing human monoclonal antibody ZIKV-195
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, E protein, M protein, ...
著者Long, F, Rossmann, M.G.
登録日2018-09-19
公開日2019-01-16
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of a potent human monoclonal antibody against Zika virus targeting a quaternary epitope.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6MGM
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Helix-Loop-helix motif of mouse DNA-binding protein inhibitor ID-1
分子名称: DNA-binding protein inhibitor ID-1
著者Benezra, R, Pavletich, N.P, Goldgur, Y, Gall, A.-L.
登録日2018-09-14
公開日2019-09-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.791 Å)
主引用文献A Small-Molecule Pan-Id Antagonist Inhibits Pathologic Ocular Neovascularization.
Cell Rep, 29, 2019
6MGQ
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BU of 6mgq by Molmil
ERAP1 in the open conformation bound to 10mer phosphinic inhibitor DG014
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 1, Phosphinic inhibitor DG014, ...
著者Stern, L.J, Maben, Z.
登録日2018-09-14
公開日2019-12-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Conformational dynamics linked to domain closure and substrate binding explain the ERAP1 allosteric regulation mechanism.
Nat Commun, 12, 2021
6BBD
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BU of 6bbd by Molmil
Structure of N-glycosylated porcine surfactant protein-D complexed with glycerol
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
著者van Eijk, M, Rynkiewicz, M.J, Khatri, K, Leymarie, N, Zaia, J, White, M.R, Hartshorn, K.L, Cafarella, T.R, van Die, I, Hessing, M, Seaton, B.A, Haagsman, H.P.
登録日2017-10-18
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus.
J. Biol. Chem., 293, 2018
1YR8
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BU of 1yr8 by Molmil
PAB0955 crystal structure : a GTPase in GTP bound form from Pyrococcus abyssi
分子名称: ATP(GTP)binding protein, GUANOSINE-5'-TRIPHOSPHATE
著者Gras, S, Carpentier, P, Armengaud, J, Housset, D.
登録日2005-02-03
公開日2006-02-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights into a new homodimeric self-activated GTPase family.
Embo Rep., 8, 2007
6C95
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BU of 6c95 by Molmil
The Human NatA (Naa10/Naa15) amino-terminal acetyltransferase complex bound to HYPK
分子名称: Huntingtin-interacting protein K, INOSITOL HEXAKISPHOSPHATE, N-alpha-acetyltransferase 10, ...
著者Gottlieb, L, Marmorstein, R.
登録日2018-01-25
公開日2018-06-06
最終更新日2021-07-21
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structure of Human NatA and Its Regulation by the Huntingtin Interacting Protein HYPK.
Structure, 26, 2018
6C9M
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BU of 6c9m by Molmil
The Human NatA (Naa10/Naa15) amino-terminal acetyltransferase complex
分子名称: INOSITOL HEXAKISPHOSPHATE, N-alpha-acetyltransferase 10, N-alpha-acetyltransferase 15, ...
著者Gottlieb, L, Marmorstein, R.
登録日2018-01-26
公開日2018-06-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of Human NatA and Its Regulation by the Huntingtin Interacting Protein HYPK.
Structure, 26, 2018
1BX6
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BU of 1bx6 by Molmil
CRYSTAL STRUCTURE OF THE POTENT NATURAL PRODUCT INHIBITOR BALANOL IN COMPLEX WITH THE CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE
分子名称: BALANOL, CAMP-DEPENDENT PROTEIN KINASE
著者Narayana, N, Xuong, N.-H, Ten Eyck, L.F, Taylor, S.S.
登録日1998-10-13
公開日1999-04-27
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the potent natural product inhibitor balanol in complex with the catalytic subunit of cAMP-dependent protein kinase.
Biochemistry, 38, 1999
1LFV
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BU of 1lfv by Molmil
OXY HEMOGLOBIN (88% RELATIVE HUMIDITY)
分子名称: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
著者Biswal, B.K, Vijayan, M.
登録日2002-04-12
公開日2002-10-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of human oxy- and deoxyhaemoglobin at different levels of humidity: variability in the T state.
Acta Crystallogr.,Sect.D, 58, 2002
6MGD
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BU of 6mgd by Molmil
Thermosulfurimonas dismutans KpsC, beta Kdo 2,7 transferase
分子名称: Capsular polysaccharide export system protein KpsC
著者Doyle, L, Mallette, E, Kimber, M.S, Whitfield, C.
登録日2018-09-13
公開日2019-03-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Biosynthesis of a conserved glycolipid anchor for Gram-negative bacterial capsules.
Nat.Chem.Biol., 15, 2019
6MQC
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Vaccine-elicited NHP FP-targeting neutralizing antibody 0PV-c.01 in complex with FP (residue 512-519)
分子名称: 0PV-C.01 antibody Fab heavy chain, 0PV-C.01 antibody Fab light chain, HIV fusion peptide residue 512-519
著者Xu, K, Wang, Y, Kwong, P.D.
登録日2018-10-09
公開日2019-07-31
最終更新日2019-11-13
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization.
Cell, 178, 2019
5U34
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BU of 5u34 by Molmil
Crystal structure of AacC2c1-sgRNA binary complex
分子名称: CRISPR-associated endonuclease C2c1, sgRNA
著者Yang, H, Gao, P, Rajashankar, K.R, Patel, D.J.
登録日2016-12-01
公開日2017-01-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.255 Å)
主引用文献PAM-Dependent Target DNA Recognition and Cleavage by C2c1 CRISPR-Cas Endonuclease.
Cell, 167, 2016
1XKP
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BU of 1xkp by Molmil
Crystal structure of the virulence factor YopN in complex with its heterodimeric chaperone SycN-YscB
分子名称: Chaperone protein sycN, Chaperone protein yscB, putative membrane-bound Yop targeting protein YopN
著者Schubot, F.D, Jackson, M.W, Penrose, K.J, Cherry, S, Tropea, J.E, Plano, G.V, Waugh, D.S.
登録日2004-09-29
公開日2005-03-22
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Three-dimensional structure of a macromolecular assembly that regulates type III secretion in Yersinia pestis.
J.Mol.Biol., 346, 2005
1IVI
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BU of 1ivi by Molmil
Crystal Structure of pig dihydrolipoamide dehydrogenase
分子名称: dihydrolipoamide dehydrogenase
著者Toyoda, T, Kobayashi, R, Sekiguchi, T, Koike, K, Koike, M, Takenaka, A.
登録日2002-03-15
公開日2003-03-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (8 Å)
主引用文献Crystallization and preliminary X-ray analysis of pig E3, lipoamide dehydrogenase.
Acta Crystallogr.,Sect.D, 54, 1998
6MQM
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Vaccine-elicited NHP FP-targeting neutralizing antibody DF1W-a.01 in complex with HIV fusion peptide (residue 512-519)
分子名称: HIV Env fusion peptide residue 512-519, antibody Fab heavy chain, antibody Fab light chain
著者Xu, K, Wang, Y, Kwong, P.D.
登録日2018-10-10
公開日2019-07-31
最終更新日2019-11-13
実験手法X-RAY DIFFRACTION (3.484 Å)
主引用文献Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization.
Cell, 178, 2019
1LFL
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DEOXY HEMOGLOBIN (90% RELATIVE HUMIDITY)
分子名称: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
著者Biswal, B.K, Vijayan, M.
登録日2002-04-11
公開日2002-10-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structures of human oxy- and deoxyhaemoglobin at different levels of humidity: variability in the T state.
Acta Crystallogr.,Sect.D, 58, 2002
6MQR
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Vaccine-elicited NHP FP-targeting neutralizing antibody 0PV-a.01 in complex with FP (residue 512-519)
分子名称: CALCIUM ION, HIV fusion peptide residue 512-519, SULFATE ION, ...
著者Xu, K, Wang, Y, Kwong, P.D.
登録日2018-10-10
公開日2019-07-31
最終更新日2019-11-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization.
Cell, 178, 2019

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