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8QV6
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BU of 8qv6 by Molmil
Structure of human SPNS2 in DDM
分子名称: DODECYL-BETA-D-MALTOSIDE, Nanobody D12, Sphingosine-1-phosphate transporter SPNS2
著者Li, H.Z, Pike, A.C.W, McKinley, G, Mukhopadhyay, S.M.M, Moreau, C, Scacioc, A, Abrusci, P, Borkowska, O, Chalk, R, Stefanic, S, Burgess-Brown, N, Duerr, K.L, Sauer, D.B.
登録日2023-10-17
公開日2025-02-19
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Transport and inhibition of the sphingosine-1-phosphate exporter SPNS2.
Nat Commun, 16, 2025
5BZZ
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BU of 5bzz by Molmil
Crystal structure of human phosphatase PTEN in its reduced state
分子名称: L(+)-TARTARIC ACID, Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
著者Lee, C.-U, Bier, D, Hennig, S, Grossmann, T.N.
登録日2015-06-11
公開日2015-10-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Redox Modulation of PTEN Phosphatase Activity by Hydrogen Peroxide and Bisperoxidovanadium Complexes.
Angew.Chem.Int.Ed.Engl., 54, 2015
7UNE
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BU of 7une by Molmil
The V1 region of bovine V-ATPase in complex with human mEAK7 (focused refinement)
分子名称: KIAA1609 protein, isoform CRA_a, V-type proton ATPase catalytic subunit A, ...
著者Wang, R, Li, X.
登録日2022-04-10
公開日2022-06-15
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.73 Å)
主引用文献Molecular basis of mEAK7-mediated human V-ATPase regulation.
Nat Commun, 13, 2022
1LB6
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BU of 1lb6 by Molmil
TRAF6-CD40 Complex
分子名称: CD40 antigen, TNF receptor-associated factor 6
著者Ye, H, Arron, J.R, Lamothe, B, Cirilli, M, Kobayashi, T, Shevde, N.K, Segal, D, Dzivenu, O, Vologodskaia, M, Yim, M, Du, K, Singh, S, Pike, J.W, Darnay, B.G, Choi, Y, Wu, H.
登録日2002-04-02
公開日2002-07-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Distinct molecular mechanism for initiating TRAF6 signalling.
Nature, 418, 2002
7UNF
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BU of 7unf by Molmil
CryoEM structure of a mEAK7 bound human V-ATPase complex
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
著者Wang, R, Li, X.
登録日2022-04-10
公開日2022-06-15
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (4.08 Å)
主引用文献Molecular basis of mEAK7-mediated human V-ATPase regulation.
Nat Commun, 13, 2022
7U4T
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BU of 7u4t by Molmil
Human V-ATPase in state 2 with SidK and mEAK-7
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, MTOR-associated protein MEAK7, ...
著者Wang, L, Fu, T.M.
登録日2022-03-01
公開日2022-08-24
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Identification of mEAK-7 as a human V-ATPase regulator via cryo-EM data mining.
Proc.Natl.Acad.Sci.USA, 119, 2022
6O7X
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BU of 6o7x by Molmil
Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 3
分子名称: Putative protein YPR170W-B, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
著者Vasanthakumar, T, Bueler, S.A, Wu, D, Beilsten-Edmands, V, Robinson, C.V, Rubinstein, J.L.
登録日2019-03-08
公開日2019-04-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献Structural comparison of the vacuolar and Golgi V-ATPases fromSaccharomyces cerevisiae.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6WC9
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BU of 6wc9 by Molmil
Human open state TMEM175 in KCl
分子名称: Endosomal/lysosomal potassium channel TMEM175, POTASSIUM ION
著者Oh, S, Paknejad, N, Hite, R.K.
登録日2020-03-30
公開日2020-04-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Gating and selectivity mechanisms for the lysosomal K + channel TMEM175.
Elife, 9, 2020
7U8O
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BU of 7u8o by Molmil
Structure of porcine V-ATPase with mEAK7 and SidK, Rotary state 2
分子名称: ATPase H(+)-transporting lysosomal accessory protein 2, ATPase H+ transporting accessory protein 1, Bacterial effector protein SidK, ...
著者Tan, Y.Z, Keon, K.A.
登録日2022-03-09
公開日2022-07-06
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献CryoEM of endogenous mammalian V-ATPase interacting with the TLDc protein mEAK-7.
Life Sci Alliance, 5, 2022
7U8R
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BU of 7u8r by Molmil
Structure of porcine kidney V-ATPase with SidK, Rotary State 3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H(+)-transporting lysosomal accessory protein 2, ATPase H+ transporting accessory protein 1, ...
著者Tan, Y.Z, Keon, K.A.
登録日2022-03-09
公開日2022-07-06
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献CryoEM of endogenous mammalian V-ATPase interacting with the TLDc protein mEAK-7.
Life Sci Alliance, 5, 2022
7U8Q
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BU of 7u8q by Molmil
Structure of porcine kidney V-ATPase with SidK, Rotary State 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H(+)-transporting lysosomal accessory protein 2, ATPase H+ transporting accessory protein 1, ...
著者Tan, Y.Z, Keon, K.A.
登録日2022-03-09
公開日2022-07-06
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献CryoEM of endogenous mammalian V-ATPase interacting with the TLDc protein mEAK-7.
Life Sci Alliance, 5, 2022
5B6M
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BU of 5b6m by Molmil
Crystal structure of human peroxiredoxin 6 in reduced state
分子名称: Peroxiredoxin-6
著者Kim, K.H, Lee, W.T, Kim, E.E.
登録日2016-05-30
公開日2016-07-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.496 Å)
主引用文献Crystal structures of human peroxiredoxin 6 in different oxidation states
Biochem.Biophys.Res.Commun., 477, 2016
7U8P
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BU of 7u8p by Molmil
Structure of porcine kidney V-ATPase with SidK, Rotary State 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H(+)-transporting lysosomal accessory protein 2, ATPase H+ transporting accessory protein 1, ...
著者Tan, Y.Z, Keon, K.A.
登録日2022-03-09
公開日2022-07-06
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献CryoEM of endogenous mammalian V-ATPase interacting with the TLDc protein mEAK-7.
Life Sci Alliance, 5, 2022
5L94
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BU of 5l94 by Molmil
The 2.25 A crystal structure of CYP109E1 from Bacillus megaterium in complex with testosterone
分子名称: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, TESTOSTERONE
著者Jozwik, I.K, Thunnissen, A.M.W.H.
登録日2016-06-09
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis of steroid binding and oxidation by the cytochrome P450 CYP109E1 from Bacillus megaterium.
Febs J., 283, 2016
5BOL
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BU of 5bol by Molmil
DNA polymerase beta ternary complex with a templating 5ClC and incoming dGTP analog
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine, DNA (5'-D(*CP*CP*GP*AP*CP*(CDO)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ...
著者Freudenthal, B.D, Wilson, S.H.
登録日2015-05-27
公開日2015-08-19
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.981 Å)
主引用文献Intrinsic mutagenic properties of 5-chlorocytosine: A mechanistic connection between chronic inflammation and cancer.
Proc.Natl.Acad.Sci.USA, 112, 2015
5BZ6
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BU of 5bz6 by Molmil
Crystal structure of the N-terminal domain single mutant (S92A) of the human mitochondrial calcium uniporter fused with T4 lysozyme
分子名称: Lysozyme,Calcium uniporter protein, mitochondrial, SULFATE ION
著者Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H.
登録日2015-06-11
公開日2015-09-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.
Embo Rep., 16, 2015
5BRM
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BU of 5brm by Molmil
Structural basis for Mob1-dependent activation of the core Mst-Lats kinase cascade in Hippo signaling
分子名称: MOB kinase activator 1A, Serine/threonine-protein kinase 3, ZINC ION
著者Luo, X, Ni, L.
登録日2015-05-31
公開日2015-07-08
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.651 Å)
主引用文献Structural basis for Mob1-dependent activation of the core Mst-Lats kinase cascade in Hippo signaling.
Genes Dev., 29, 2015
5VOX
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BU of 5vox by Molmil
Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 1)
分子名称: V-type proton ATPase catalytic subunit A,V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
著者Zhao, J.
登録日2017-05-03
公開日2017-06-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献Molecular basis for the binding and modulation of V-ATPase by a bacterial effector protein.
PLoS Pathog., 13, 2017
3SR0
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BU of 3sr0 by Molmil
Crystal Structure of the Phosphoryl Transfer Transition State Mimic in the Adenylate Kinase: ADP/AlF4/AMP in the active site
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, ...
著者Cho, Y.-J, Kern, D.
登録日2011-07-06
公開日2012-10-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.565 Å)
主引用文献The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
2RMQ
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BU of 2rmq by Molmil
Solution structure of fully modified 4'-thioDNA with the sequence of d(CGCGAATTCGCG)
分子名称: DNA (5'-D(*(C4S)P*(S4G)P*(C4S)P*(S4G)P*(S4A)P*(S4A)P*(T49)P*(T49)P*(C4S)P*(S4G)P*(C4S)P*(S4G))-3')
著者Matsugami, A, Ohyama, T, Inada, M, Katahira, M.
登録日2007-11-12
公開日2008-04-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Unexpected A-form formation of 4'-thioDNA in solution, revealed by NMR, and the implications as to the mechanism of nuclease resistance
Nucleic Acids Res., 36, 2008
5BRK
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BU of 5brk by Molmil
pMob1-Lats1 complex
分子名称: MOB kinase activator 1A, Serine/threonine-protein kinase LATS1, ZINC ION
著者Ni, L, Luo, X.
登録日2015-05-31
公開日2015-07-08
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for Mob1-dependent activation of the core Mst-Lats kinase cascade in Hippo signaling.
Genes Dev., 29, 2015
5BUG
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BU of 5bug by Molmil
Crystal structure of human phosphatase PTEN oxidized by H2O2
分子名称: L(+)-TARTARIC ACID, Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
著者Lee, C.-U, Bier, D, Hennig, S, Grossmann, T.N.
登録日2015-06-03
公開日2015-10-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Redox Modulation of PTEN Phosphatase Activity by Hydrogen Peroxide and Bisperoxidovanadium Complexes.
Angew.Chem.Int.Ed.Engl., 54, 2015
4KN7
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BU of 4kn7 by Molmil
X-ray crystal structure of the Escherichia coli RNA polymerase in complex with Benzoxazinorifamycin-2c
分子名称: Benzoxazinorifamycin-2c, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Murakami, K.S.
登録日2013-05-08
公開日2013-05-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.686 Å)
主引用文献X-ray Crystal Structures of the Escherichia coli RNA Polymerase in Complex with Benzoxazinorifamycins.
J.Med.Chem., 56, 2013
4KN4
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BU of 4kn4 by Molmil
X-ray crystal structure of the Escherichia coli RNA polymerase in complex with Benzoxazinorifamycin-2b
分子名称: Benzoxazinorifamycin-2b, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Murakami, K.S.
登録日2013-05-08
公開日2013-05-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.965 Å)
主引用文献X-ray Crystal Structures of the Escherichia coli RNA Polymerase in Complex with Benzoxazinorifamycins.
J.Med.Chem., 56, 2013
2B4D
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BU of 2b4d by Molmil
SSAT+COA+SP- SP disordered
分子名称: COENZYME A, Diamine acetyltransferase 1
著者Bewley, M.C, Graziano, V, Jiang, J.S, Matz, E, Studier, F.W, Pegg, A.P, Coleman, C.S, Flanagan, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2005-09-23
公開日2006-01-17
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of wild-type and mutant human spermidine/spermine N1-acetyltransferase, a potential therapeutic drug target
Proc.Natl.Acad.Sci.Usa, 103, 2006

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