PDB: 236620 件ウェブページステータス検索Chemie searchBIRD

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4NFO	Crystal Structure Analysis of the 16mer GCAGACUUAAGUCUGC 分子名称: GCAGACUUAAGUCUGC, SPERMINE 著者 Beal, P.A, Fisher, A.J, Phelps, K.J, Ibarra-Soza, J.M, Zheng, Y. 登録日 2013-10-31 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Click Modification of RNA at Adenosine: Structure and Reactivity of 7-Ethynyl- and 7-Triazolyl-8-aza-7-deazaadenosine in RNA. Acs Chem.Biol., 9, 2014
4NFP	Crystal Structure Analysis of the 16mer GCAGNCUUAAGUCUGC containing 8-aza-7-deaza-7-ethynyl Adenosine 分子名称: FORMAMIDE, GCAG(A7E)CUUAAGUCUGC 著者 Beal, P.A, Fisher, A.J, Phelps, K.J, Ibarra-Soza, J.M, Zheng, Y. 登録日 2013-10-31 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Click Modification of RNA at Adenosine: Structure and Reactivity of 7-Ethynyl- and 7-Triazolyl-8-aza-7-deazaadenosine in RNA. Acs Chem.Biol., 9, 2014
4NFQ	Crystal Structure Analysis of the 16mer GCAGNCUUAAGUCUGC containing 7-triazolyl-8-aza-7-deazaadenosine 分子名称: GCAG(7AT)CUUAAGUCUGC 著者 Beal, P.A, Fisher, A.J, Phelps, K.J, Ibarra-Soza, J.M, Zheng, Y. 登録日 2013-10-31 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Click Modification of RNA at Adenosine: Structure and Reactivity of 7-Ethynyl- and 7-Triazolyl-8-aza-7-deazaadenosine in RNA. Acs Chem.Biol., 9, 2014
4NFR	Human brain aspartoacylase mutant E285A complex with intermediate analog (N-phosphonomethyl-L-aspartate) 分子名称: Aspartoacylase, N-[HYDROXY(METHYL)PHOSPHORYL]-L-ASPARTIC ACID, ZINC ION 著者 Wijayasinghe, Y.S, Pavlovsky, A.G, Viola, R.E. 登録日 2013-10-31 公開日 2014-07-30 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Aspartoacylase catalytic deficiency as the cause of canavan disease: a structural perspective. Biochemistry, 53, 2014
4NFS	V203A horse liver alcohol dehydrogenase E complexed with NAD and 2,2,2-trifluoroethanol 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Alcohol dehydrogenase E chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), ... 著者 Plapp, B.V. 登録日 2013-10-31 公開日 2013-11-13 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Effects of cavities at the nicotinamide binding site of liver alcohol dehydrogenase on structure, dynamics and catalysis. Biochemistry, 53, 2014
4NFT	Crystal structure of human lnkH2B-h2A.Z-Anp32e 分子名称: Acidic leucine-rich nuclear phosphoprotein 32 family member E, Histone H2B type 2-E, Histone H2A.Z 著者 Shan, S, Pan, L, Mao, Z, Wang, W, Sun, J, Dong, Q, Liang, X, Ding, X, Chen, S, Dai, L, Zhang, Z, Zhu, B, Zhou, Z. 登録日 2013-11-01 公開日 2014-04-09 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Anp32e, a higher eukaryotic histone chaperone directs preferential recognition for H2A.Z Cell Res., 24, 2014
4NFU	Structure of the central plant immunity signaling node EDS1 in complex with its interaction partner SAG101 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, EDS1, ISOPROPYL ALCOHOL, ... 著者 Wagner, S, Stuttmann, J, Rietz, S, Guerois, R, Niefind, K, Parker, J.E. 登録日 2013-11-01 公開日 2013-12-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Structural Basis for Signaling by Exclusive EDS1 Heteromeric Complexes with SAG101 or PAD4 in Plant Innate Immunity. Cell Host Microbe, 14, 2013
4NFV	Previously de-ionized HEW lysozyme batch crystallized in 1.1 M MnCl2 分子名称: CHLORIDE ION, Lysozyme C, MANGANESE (II) ION 著者 Benas, P, Legrand, L, Ries-Kautt, M. 登録日 2013-11-01 公開日 2014-05-28 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Weak protein-cationic co-ion interactions addressed by X-ray crystallography and mass spectrometry. Acta Crystallogr.,Sect.D, 70, 2014
4NFW	Structure and atypical hydrolysis mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli 分子名称: MANGANESE (II) ION, Putative Nudix hydrolase ymfB, SULFATE ION 著者 Hong, M.K, Kim, J.K, Kang, L.W. 登録日 2013-11-01 公開日 2014-05-14 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Divalent metal ion-based catalytic mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli Acta Crystallogr.,Sect.D, 70, 2014
4NFX	Structure and atypical hydrolysis mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli 分子名称: Putative Nudix hydrolase ymfB 著者 Hong, M.K, Kim, J.K, Kang, L.W. 登録日 2013-11-01 公開日 2014-05-14 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Divalent metal ion-based catalytic mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli Acta Crystallogr.,Sect.D, 70, 2014
4NFY	Crystal Structure of 3-phosphoglycerate Dehydrogenase from Entamoeba histolytica 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-3-phosphoglycerate dehydrogenase, putative 著者 Singh, R.K, Gourinath, S. 登録日 2013-11-01 公開日 2014-10-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Crystal structures and kinetics of Type III 3-phosphoglycerate dehydrogenase reveal catalysis by lysine. Febs J., 281, 2014
4NFZ	Crystal structure of polymerase subunit PA N-terminal endonuclease domain from bat-derived influenza virus H17N10 分子名称: MANGANESE (II) ION, Polymerase PA 著者 Tefsen, B, Lu, G, Zhu, Y, Haywood, J, Zhao, L, Deng, T, Qi, J, Gao, G.F. 登録日 2013-11-01 公開日 2013-12-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The N-Terminal Domain of PA from Bat-Derived Influenza-Like Virus H17N10 Has Endonuclease Activity J.Virol., 88, 2014
4NG0	Lar_0958 a cell surface adhesin from lactobacillus reuteri 分子名称: LAR_0958 cell surface adhesin 著者 Etzold, S, Mackenzie, D.A, Juge, N, Hemmings, A.M. 登録日 2013-11-01 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.501 Å) 主引用文献 Structural and molecular insights into novel surface-exposed mucus adhesins from Lactobacillus reuteri human strains. Mol.Microbiol., 92, 2014
4NG1	Previously de-ionized HEW lysozyme batch crystallized in 1.9 M CsCl 分子名称: CESIUM ION, CHLORIDE ION, Lysozyme C 著者 Benas, P, Legrand, L, Ries-Kautt, M. 登録日 2013-11-01 公開日 2014-05-28 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Weak protein-cationic co-ion interactions addressed by X-ray crystallography and mass spectrometry. Acta Crystallogr.,Sect.D, 70, 2014
4NG2	Crystal structure of LasR LBD-QslA complex from Pseudomonas aeruginosa 分子名称: N-3-OXO-DODECANOYL-L-HOMOSERINE LACTONE, Transcriptional activator protein LasR, Uncharacterized protein 著者 Fan, H, Wu, D.H, Song, H. 登録日 2013-11-01 公開日 2013-12-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.413 Å) 主引用文献 QsIA disrupts LasR dimerization in antiactivation of bacterial quorum sensing Proc.Natl.Acad.Sci.USA, 110, 2013
4NG3	Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with 4-Hydroxy-3-methoxy-5-nitrobenzoic acid 分子名称: 1,2-ETHANEDIOL, 4-hydroxy-3-methoxy-5-nitrobenzoic acid, 5-carboxyvanillate decarboxylase, ... 著者 Fedorov, A.A, Fedorov, E.V, Vladimirova, A, Raushel, F.M, Almo, S.C. 登録日 2013-11-01 公開日 2013-11-13 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.751 Å) 主引用文献 Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with 4-Hydroxy-3-methoxy-5-nitrobenzoic acid To be Published
4NG4	Structure of phosphoglycerate kinase (CBU_1782) from Coxiella burnetii 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoglycerate kinase 著者 Franklin, M.C, Cheung, J, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J. 登録日 2013-11-01 公開日 2015-06-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 Structural genomics for drug design against the pathogen Coxiella burnetii. Proteins, 83, 2015
4NG5	V203A horse liver alcohol dehydrogenase E complexed with NAD+ and 2,3,4,5,6-pentafluorobenzyl alcohol 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL, Alcohol dehydrogenase E chain, ... 著者 Plapp, B.V. 登録日 2013-11-01 公開日 2013-11-13 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Effects of cavities at the nicotinamide binding site of liver alcohol dehydrogenase on structure, dynamics and catalysis. Biochemistry, 53, 2014
4NG6	The effects of Lysine 200 and Phenylalanine 239 Farnesyl Pyrophosphate Synthase (FPPS) mutations on the catalytic activity, crystal structure and inhibition by nitrogen containing bisphosphonates 分子名称: 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID, 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Farnesyl pyrophosphate synthase, ... 著者 Tsoumpra, M.K, Muniz, J.R.C, Barnett, B.L, Pilka, E, Kwaasi, A.A, Kavanagh, K.L, Evdokimov, A, Walter, R.L, Ebetino, F.H, Oppermann, U, Russell, R.G.G, Dunford, J.E. 登録日 2013-11-01 公開日 2014-11-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The effects of Lysine 200 and Phenylalanine 239 Farnesyl Pyrophosphate Synthase (FPPS) mutations on the catalytic activity, crystal structure and inhibition by nitrogen containing bisphosphonates TO BE PUBLISHED
4NG7	Crystal structure of a TRAP periplasmic solute binding protein from Citrobacter koseri (CKO_04899), Target EFI-510094, apo, open structure 分子名称: TRAP periplasmic solute binding protein 著者 Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI) 登録日 2013-11-01 公開日 2013-11-20 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes. Biochemistry, 54, 2015
4NG8	Dialyzed HEW lysozyme batch crystallized in 1.9 M CsCl and collected at 100 K. 分子名称: CESIUM ION, CHLORIDE ION, Lysozyme C 著者 Benas, P, Legrand, L, Ries-Kautt, M. 登録日 2013-11-01 公開日 2014-05-28 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (1.09 Å) 主引用文献 Weak protein-cationic co-ion interactions addressed by X-ray crystallography and mass spectrometry. Acta Crystallogr.,Sect.D, 70, 2014
4NG9	Factor viia in complex with the inhibitor (2R)-2-[(1-aminoisoquinolin-6-yl)amino]-2-[3-ethoxy-4-(propan-2-yloxy)phenyl]-n-(3-sulfamoylbenzyl)ethanamide 分子名称: (2R)-2-[(1-aminoisoquinolin-6-yl)amino]-2-[3-ethoxy-4-(propan-2-yloxy)phenyl]-N-(3-sulfamoylbenzyl)ethanamide, CALCIUM ION, Factor VIIa (Heavy Chain), ... 著者 Wei, A, Anumula, R. 登録日 2013-11-01 公開日 2014-01-08 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Design and Synthesis of Phenylpyrrolidine Phenylglycinamides As Highly Potent and Selective TF-FVIIa Inhibitors. ACS Med Chem Lett, 5, 2014
4NGA	Factor viia in complex with the inhibitor (2R)-2-[(1-aminoisoquinolin-6-yl)amino]-2-[3-ethoxy-4-(propan-2-yloxy)phenyl]-N-[2-(propan-2-ylsulfonyl)benzyl]ethanamide 分子名称: (2R)-2-[(1-aminoisoquinolin-6-yl)amino]-2-[3-ethoxy-4-(propan-2-yloxy)phenyl]-N-[2-(propan-2-ylsulfonyl)benzyl]ethanamide, CALCIUM ION, Factor VIIa (Heavy Chain), ... 著者 Wei, A, Anumula, R. 登録日 2013-11-01 公開日 2014-01-08 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Design and Synthesis of Phenylpyrrolidine Phenylglycinamides As Highly Potent and Selective TF-FVIIa Inhibitors. ACS Med Chem Lett, 5, 2014
4NGB	Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 12-mer siRNA having UU-3' ends (2.25 Angstrom resolution) 分子名称: 5'-R(*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*UP*U)-3', Endoribonuclease Dicer 著者 Simanshu, D.K, Tian, Y, Patel, D.J. 登録日 2013-11-01 公開日 2014-03-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer. Mol.Cell, 53, 2014
4NGC	Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 12-mer siRNA having UA-3' ends (2.1 Angstrom resolution) 分子名称: 5'-R(*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*UP*A)-3', Endoribonuclease Dicer 著者 Simanshu, D.K, Tian, Y, Patel, D.J. 登録日 2013-11-01 公開日 2014-03-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.104 Å) 主引用文献 A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer. Mol.Cell, 53, 2014

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