PDB: 13258 件ウェブページステータス検索Chemie searchBIRD

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3O0F	Crystal structure of a putative metal-dependent phosphoesterase (BAD_1165) from bifidobacterium adolescentis atcc 15703 at 1.94 A resolution 分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, FE (III) ION, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2010-07-19 公開日 2010-08-25 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity. Proteins, 79, 2011
4G3W	Crystal structure of a. aeolicus nlh1 gaf domain in an inactive state 分子名称: Transcriptional regulator nlh1 著者 Batchelor, J.D, Wang, A, Lee, P, Doucleff, M, Wemmer, D.E. 登録日 2012-07-15 公開日 2013-05-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus J.Mol.Biol., 425, 2013
2GNQ	Structure of wdr5 分子名称: CHLORIDE ION, WD-repeat protein 5 著者 Min, J, Schuetz, A, Allali-Hassani, A, Loppnau, P, Vedadi, M, Weigelt, J, Sundstrom, M, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC) 登録日 2006-04-10 公開日 2006-06-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis for molecular recognition and presentation of histone H3 By WDR5. Embo J., 25, 2006
2JLD	Extremely Tight Binding of Ruthenium Complex to Glycogen Synthase Kinase 3 分子名称: GLYCOGEN SYNTHASE KINASE-3 BETA, PEPTIDE (ALA-GLY-GLY-ALA-ALA-ALA-ALA-ALA), RUTHENIUM PYRIDOCARBAZOLE 著者 Atilla-Gokcumen, G.E, Pagano, N, Streu, C, Maksimoska, J, Filippakopoulos, P, Knapp, S, Meggers, E. 登録日 2008-09-08 公開日 2008-12-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Extremely Tight Binding of a Ruthenium Complex to Glycogen Synthase Kinase 3. Chembiochem, 9, 2008
8J9K	Structure of basal beta-arrestin2 分子名称: Beta-arrestin-2, Fab6 heavy chain, Fab6 light chain 著者 Maharana, J, Sarma, P, Yadav, M.K, Chami, M, Banerjee, R, Shukla, A.K. 登録日 2023-05-03 公開日 2023-12-27 最終更新日 2024-01-17 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Molecular insights into atypical modes of beta-arrestin interaction with seven transmembrane receptors. Science, 383, 2024
4F38	Crystal structure of geranylgeranylated RhoA in complex with RhoGDI in its active GPPNHP-bound form 分子名称: GERAN-8-YL GERAN, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ... 著者 Guo, Z, Tnimov, Z, Alexandrov, K. 登録日 2012-05-09 公開日 2012-05-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Quantitative Analysis of Prenylated RhoA Interaction with Its Chaperone, RhoGDI. J.Biol.Chem., 287, 2012
5E0L	LC8 - Chica (415-424) Complex 分子名称: Dynein light chain 1, cytoplasmic, Protein Chica peptide, ... 著者 Clark, S.A, Barbar, E.B, Karplus, P.A. 登録日 2015-09-29 公開日 2015-12-30 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.31 Å) 主引用文献 The Anchored Flexibility Model in LC8 Motif Recognition: Insights from the Chica Complex. Biochemistry, 55, 2016
6ASY	BiP-ATP2 分子名称: 78 kDa glucose-regulated protein, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ... 著者 Liu, Q, Yang, J, Zong, Y, Columbus, L, Zhou, L. 登録日 2017-08-26 公開日 2017-12-06 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Conformation transitions of the polypeptide-binding pocket support an active substrate release from Hsp70s. Nat Commun, 8, 2017
7JVR	Cryo-EM structure of Bromocriptine-bound dopamine receptor 2 in complex with Gi protein 分子名称: Antibody fragment ScFv16, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... 著者 Zhuang, Y, Xu, P, Mao, C, Wang, L, Krumm, B, Zhou, X.E, Huang, S, Liu, H, Cheng, X, Huang, X.-P, Sheng, D.-D, Xu, T, Liu, Y.-F, Wang, Y, Guo, J, Jiang, Y, Jiang, H, Melcher, K, Roth, B.L, Zhang, Y, Zhang, C, Xu, H.E. 登録日 2020-08-22 公開日 2021-02-24 最終更新日 2021-03-31 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural insights into the human D1 and D2 dopamine receptor signaling complexes. Cell, 184, 2021
2ZJO	Crystal structure of hepatitis C virus NS3 helicase with a novel inhibitor 分子名称: Genome polyprotein, N-[4-(BIS{4-[(3-SULFOPHENYL)AMINO]PHENYL}METHYLENE)CYCLOHEXA-2,5-DIEN-1-YLIDENE]-4-SULFOBENZENAMINIUM 著者 Liaw, S.H, Chen, S.J, Hu, C.Y, Chi, W.K, Chu, I.D, Hwang, L.H, Chern, J.W, Chen, D.S. 登録日 2008-03-07 公開日 2009-03-10 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure-Based Discovery of Triphenylmethane Derivatives as Novel Inhibitors of Hepatitis C Virus Helicase To be Published
3CRG	Crystal structure of human fibroblast growth factor-1 with mutations Glu81Ala, Glu82Asn and Lys101Ala 分子名称: FORMIC ACID, GLYCEROL, Heparin-binding growth factor 1, ... 著者 Meher, A.K, Honjo, E, Kuroki, R, Lee, J, Somasundaram, T, Blaber, M. 登録日 2008-04-07 公開日 2009-02-17 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Engineering an improved crystal contact across a solvent-mediated interface of human fibroblast growth factor 1. Acta Crystallogr.,Sect.F, 65, 2009
7B5R	Ubiquitin ligation to F-box protein substrates by SCF-RBR E3-E3 super-assembly: CUL1-RBX1-SKP1-SKP2-CKSHS1-Cyclin A-CDK2-p27 分子名称: Cullin-1, Cyclin-A2, Cyclin-dependent kinase 2, ... 著者 Horn-Ghetko, D, Prabu, J.R, Schulman, B.A. 登録日 2020-12-07 公開日 2021-02-10 最終更新日 2021-03-10 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Ubiquitin ligation to F-box protein targets by SCF-RBR E3-E3 super-assembly. Nature, 590, 2021
7E73	Crystal structure of human ERK2 mutant (Y36H) 分子名称: Mitogen-activated protein kinase 1, SULFATE ION 著者 Park, Y.S, Kim, M, Ryu, S.E. 登録日 2021-02-25 公開日 2022-03-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Structural mechanism of inhibitor-resistance by ERK2 mutations Biodesign, 9, 2021
7B5M	Ubiquitin ligation to F-box protein substrates by SCF-RBR E3-E3 super-assembly: CUL1-RBX1-SKP1-SKP2-CKSHS1-p27~Ub~ARIH1. Transition State 2 分子名称: Cullin-1, Cyclin-dependent kinase inhibitor 1B, Cyclin-dependent kinases regulatory subunit 1, ... 著者 Horn-Ghetko, D, Prabu, J.R, Schulman, B.A. 登録日 2020-12-05 公開日 2021-02-17 最終更新日 2021-03-10 実験手法 ELECTRON MICROSCOPY (3.91 Å) 主引用文献 Ubiquitin ligation to F-box protein targets by SCF-RBR E3-E3 super-assembly. Nature, 590, 2021
7E75	Crystal structure of human ERK2 mutant (G37C) 分子名称: Mitogen-activated protein kinase 1 著者 Park, Y.S, Kim, M, Ryu, S.E. 登録日 2021-02-25 公開日 2022-03-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.481 Å) 主引用文献 Structural mechanism of inhibitor-resistance by ERK2 mutations Biodesign, 9, 2021
3E0F	Crystal structure of a putative metal-dependent phosphoesterase (bad_1165) from bifidobacterium adolescentis atcc 15703 at 2.40 A resolution 分子名称: ACETATE ION, FE (III) ION, PHOSPHATE ION, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2008-07-31 公開日 2008-09-02 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity. Proteins, 79, 2011
8HML	Co-crystal structure of the C terminal DNA binding domain of Saccharopolyspora erythraea GlnR in complex with its conserved promoter DNA in 2.95 Angstrom resolution 分子名称: DNA (5'-D(*AP*CP*GP*TP*AP*AP*CP*AP*TP*CP*GP*CP*GP*GP*TP*AP*AP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*TP*TP*AP*CP*CP*GP*CP*GP*AP*TP*GP*TP*TP*AP*CP*GP*T)-3'), DNA-binding response OmpR family regulator 著者 Lin, W, Xu, J.C. 登録日 2022-12-04 公開日 2023-06-07 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structural insights into the transcription activation mechanism of the global regulator GlnR from actinobacteria. Proc.Natl.Acad.Sci.USA, 120, 2023
1DY9	Inhibition of the Hepatitis C Virus NS3/4A Protease. The Crystal Structures of Two Protease-Inhibitor Complexes (inhibitor I) 分子名称: N-(tert-butoxycarbonyl)-L-alpha-glutamyl-N-[(1R)-1-(carboxycarbonyl)-3,3-difluoropropyl]-L-leucinamide, NONSTRUCTURAL PROTEIN NS4A (P4), PROTEASE/HELICASE NS3 (P70), ... 著者 Di Marco, S, Rizzi, M, Volpari, C, Walsh, M, Narjes, F, Colarusso, S, De Francesco, R, Matassa, V.G, Sollazzo, M. 登録日 2000-01-31 公開日 2001-01-28 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Inhibition of the Hepatitis C Virus Ns3/4A Protease the Crystal Structures of Two Protease-Inhibitor Complexes J.Biol.Chem., 275, 2000
7AXU	Structure of WDR5:CS-VIP8 cocrystal after illumination in situ 分子名称: WD repeat-containing protein 5 著者 Werel, L, Essen, L.-O. 登録日 2020-11-10 公開日 2021-11-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Bistable Photoswitch Allows in Vivo Control of Hematopoiesis. Acs Cent.Sci., 8, 2022
6V6M	Crystal structure of an inactive state of GMPPNP-bound RhoA 分子名称: 1,4-DIETHYLENE DIOXIDE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ... 著者 Lin, Y, Zheng, Y. 登録日 2019-12-05 公開日 2020-12-09 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 Structure of an inactive conformation of GTP-bound RhoA GTPase. Structure, 29, 2021
6V6U	Crystal structure of RhoA-GDP with novel Switch I conformation 分子名称: 1,4-DIETHYLENE DIOXIDE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Lin, Y, Zheng, Y. 登録日 2019-12-06 公開日 2020-12-23 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.16 Å) 主引用文献 Structure of an inactive conformation of GTP-bound RhoA GTPase. Structure, 29, 2021
1DY8	Inhibition of the Hepatitis C Virus NS3/4A Protease. The Crystal Structures of Two Protease-Inhibitor Complexes (inhibitor II) 分子名称: N-[(benzyloxy)carbonyl]-L-isoleucyl-N-[(1R)-1-(carboxycarbonyl)-3,3-difluoropropyl]-L-leucinamide, NONSTRUCTURAL PROTEIN NS4A (P4), PROTEASE/HELICASE NS3 (P70) 著者 Di Marco, S, Rizzi, M, Volpari, C, Walsh, M, Narjes, F, Colarusso, S, De Francesco, R, Matassa, V.G, Sollazzo, M. 登録日 2000-01-31 公開日 2001-01-28 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Inhibition of the Hepatitis C Virus Ns3/4A Protease the Crystal Structures of Two Protease-Inhibitor Complexes J.Biol.Chem., 275, 2000
7AXQ	Structure of the cryo-trapped WDR5:CS-VIP8 cocrystal after illumination at 405 nm and 180 K 分子名称: CS-VIP8, WD repeat-containing protein 5 著者 Werel, L, Essen, L.-O. 登録日 2020-11-10 公開日 2021-12-15 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.562 Å) 主引用文献 Bistable Photoswitch Allows in Vivo Control of Hematopoiesis. Acs Cent.Sci., 8, 2022
7AXX	Structure of WDR5:CS-VIP8 crystal after illumination at 405 nm and room temperature 分子名称: (ALQ)(4FO)R(ABA)(DPN)(EDN)(S7Z), WD repeat-containing protein 5 著者 Werel, L, Essen, L.-O. 登録日 2020-11-10 公開日 2021-12-15 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Bistable Photoswitch Allows in Vivo Control of Hematopoiesis. Acs Cent.Sci., 8, 2022
7AXP	Structural characterisation of WDR5:CS-VIP8 interaction in cis state 2 分子名称: CS-VIP8, WD repeat-containing protein 5 著者 Werel, L, Essen, L.-O. 登録日 2020-11-10 公開日 2021-12-15 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.432 Å) 主引用文献 Bistable Photoswitch Allows in Vivo Control of Hematopoiesis. Acs Cent.Sci., 8, 2022

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