PDB: 463 件ウェブページステータス検索Chemie searchBIRD

---

4QIW	Crystal structure of euryarchaeal RNA polymerase from Thermococcus kodakarensis 分子名称: DNA-directed RNA polymerase, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ... 著者 Jun, S.-H, Murakami, K.S. 登録日 2014-06-02 公開日 2014-10-08 最終更新日 2014-11-26 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 The X-ray crystal structure of the euryarchaeal RNA polymerase in an open-clamp configuration. Nat Commun, 5, 2014
4R71	Structure of the Qbeta holoenzyme complex in the P1211 crystal form 分子名称: 30S ribosomal protein S1, Elongation factor Ts, Elongation factor Tu, ... 著者 Gytz, H, Seweryn, P, Kutlubaeva, Z, Chetverin, A.B, Brodersen, D.E, Knudsen, C.R. 登録日 2014-08-26 公開日 2015-09-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Structural basis for RNA-genome recognition during bacteriophage Q beta replication. Nucleic Acids Res., 43, 2015
1PQV	RNA polymerase II-TFIIS complex 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Kettenberger, H, Armache, K.-J, Cramer, P. 登録日 2003-06-19 公開日 2003-08-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Architecture of the RNA Polymerase II-TFIIS Complex and Implications for mRNA Cleavage Cell(Cambridge,Mass.), 114, 2003
5SVA	Mediator-RNA Polymerase II Pre-Initiation Complex 分子名称: 108bp HIS4 Promoter Non-template Strand (-92/+16), 108bp HIS4 Promoter Template Strand (+16/-92), DNA repair helicase RAD25, ... 著者 Robinson, P.J, Bushnell, D.A, Kornberg, R.D. 登録日 2016-08-05 公開日 2016-09-28 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (15.3 Å) 主引用文献 Structure of a Complete Mediator-RNA Polymerase II Pre-Initiation Complex. Cell, 166, 2016
5OIK	Structure of an RNA polymerase II-DSIF transcription elongation complex 分子名称: DNA (43-MER), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Bernecky, C, Plitzko, J.M, Cramer, P. 登録日 2017-07-18 公開日 2017-09-13 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp. Nat. Struct. Mol. Biol., 24, 2017
4BXZ	RNA Polymerase II-Bye1 complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-16 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (4.8 Å) 主引用文献 Structures of RNA Polymerase II Complexes with Bye1, a Chromatin-Binding Phf3/Dido1 Homologue Proc.Natl.Acad.Sci.USA, 110, 2013
6O81	Electron cryo-microscopy of the eukaryotic translation initiation factor 2B bound to translation initiation factor 2 from Homo sapiens 分子名称: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Eukaryotic translation initiation factor 2 subunit 1, Eukaryotic translation initiation factor 2 subunit 3, ... 著者 Nguyen, H, Kenner, L, Frost, A. 登録日 2019-03-08 公開日 2019-05-15 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.21 Å) 主引用文献 eIF2B-catalyzed nucleotide exchange and phosphoregulation by the integrated stress response. Science, 364, 2019
1NT9	Complete 12-subunit RNA polymerase II 分子名称: DNA-DIRECTED RNA POLYMERASE II 13.6 KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 19 KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT, ... 著者 Armache, K.-J, Kettenberger, H, Cramer, P. 登録日 2003-01-29 公開日 2003-04-22 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Architecture of initiation-competent 12-subunit RNA polymerase II Proc.Natl.Acad.Sci.USA, 100, 2003
4BY1	elongating RNA Polymerase II-Bye1 TLD complex soaked with AMPCPP 分子名称: 5'-D(*AP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*AP *TP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*AP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP)-3', ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-17 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structures of RNA Polymerase II Complexes with Bye1, a Chromatin-Binding Phf3/Dido1 Homologue Proc.Natl.Acad.Sci.USA, 110, 2013
4BXX	Arrested RNA polymerase II-Bye1 complex 分子名称: 5'-D(*AP*GP*CP*TP*AP*GP*CP*TP*TP*AP*CP*CP*TP*GP *GP*TP*GP* BRUP*TP*GP*CP*TP*CP*TP*AP*AP*DC)-3', 5'-D(*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP)-3', 5'-D(*GP*AP*GP*GP*TP*AP*AP*GP*CP*TP*AP*GP*CP*TP)-3', ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-16 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 Structures of RNA Polymerase II Complexes with Bye1, a Chromatin-Binding Phf3/Dido1 Homologue Proc.Natl.Acad.Sci.USA, 110, 2013
5U0S	Cryo-EM structure of the Mediator-RNAPII complex 分子名称: Mediator complex subunit 10, Mediator complex subunit 11, Mediator complex subunit 14, ... 著者 Tsai, K.-L, Yu, X, Gopalan, S, Chao, T.-C, Zhang, Y, Florens, L, Washburn, M.P, Murakami, K, Conaway, R.C, Conaway, J.W, Asturias, F. 登録日 2016-11-26 公開日 2017-03-08 最終更新日 2020-01-01 実験手法 ELECTRON MICROSCOPY (7.8 Å) 主引用文献 Mediator structure and rearrangements required for holoenzyme formation. Nature, 544, 2017
5OQM	STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Schilbach, S, Hantsche, M, Tegunov, D, Dienemann, C, Wigge, C, Urlaub, H, Cramer, P. 登録日 2017-08-13 公開日 2018-05-09 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 Structures of transcription pre-initiation complex with TFIIH and Mediator. Nature, 551, 2017
6O85	Electron cryo-microscopy of the eukaryotic translation initiation factor 2B bound to eukaryotic translation initiation factor 2 from Homo sapiens 分子名称: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Eukaryotic translation initiation factor 2 subunit 1, Eukaryotic translation initiation factor 2 subunit 3, ... 著者 Nguyen, H.C, Kenner, L.R, Frost, A.S. 登録日 2019-03-08 公開日 2019-05-15 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.03 Å) 主引用文献 eIF2B-catalyzed nucleotide exchange and phosphoregulation by the integrated stress response. Science, 364, 2019
6O9Z	Electron cryo-microscopy of the eukaryotic translation initiation factor 2B bound to eukaryotic translation initiation factor 2 from Homo sapiens 分子名称: Eukaryotic translation initiation factor 2 subunit 1, Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, ... 著者 Nguyen, H.C, Kenner, L.R, Frost, A.S. 登録日 2019-03-15 公開日 2019-05-15 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.03 Å) 主引用文献 eIF2B-catalyzed nucleotide exchange and phosphoregulation by the integrated stress response. Science, 364, 2019
2PMZ	Archaeal RNA polymerase from Sulfolobus solfataricus 分子名称: DNA-directed RNA polymerase subunit A, DNA-directed RNA polymerase subunit A", DNA-directed RNA polymerase subunit B, ... 著者 Murakami, K.S. 登録日 2007-04-23 公開日 2008-02-12 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 The X-ray crystal structure of RNA polymerase from Archaea Nature, 451, 2008
5OQJ	STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH 分子名称: DNA repair helicase RAD25, DNA repair helicase RAD3, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Hantsche, M, Tegunov, D, Dienemann, C, Wigge, C, Henning, U, Cramer, P. 登録日 2017-08-11 公開日 2018-04-25 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Structures of transcription pre-initiation complex with TFIIH and Mediator. Nature, 551, 2017
5VVR	Ternary complex of RNA Pol II, transcription scaffold and Rad26 分子名称: DNA (NTS), DNA (TS), DNA repair and recombination protein RAD26, ... 著者 Lahiri, I, Leschziner, A.E. 登録日 2017-05-19 公開日 2017-11-22 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 Structural basis for the initiation of eukaryotic transcription-coupled DNA repair. Nature, 551, 2017
2R7Z	Cisplatin lesion containing RNA polymerase II elongation complex 分子名称: 5'-D(*CP*AP*AP*GP*TP*AP*G)-3', 5'-D(*TP*AP*CP*TP*TP*GUP*CP*CP*CP*TP*CP*CP*TP*CP*AP*T)-3', 5'-R(*UP*UP*UP*GP*AP*GP*GP*AP*GP*G)-3', ... 著者 Damsma, G.E, Alt, A, Brueckner, F, Carell, T, Cramer, P. 登録日 2007-09-10 公開日 2007-11-20 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Mechanism of transcriptional stalling at cisplatin-damaged DNA. Nat.Struct.Mol.Biol., 14, 2007
2R92	Elongation complex of RNA polymerase II with artificial RdRP scaffold 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Lehmann, E, Brueckner, F, Cramer, P. 登録日 2007-09-12 公開日 2007-11-27 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Molecular basis of RNA-dependent RNA polymerase II activity. Nature, 450, 2007
6A5O	RNA polymerase II elongation complex stalled at SHL(-6) of the nucleosome 分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Kujirai, T, Ehara, H, Fujino, Y, Shirouzu, M, Sekine, S, Kurumizaka, H. 登録日 2018-06-25 公開日 2018-10-03 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (9.9 Å) 主引用文献 Structural basis of the nucleosome transition during RNA polymerase II passage. Science, 362, 2018
8GXQ	PIC-Mediator in complex with +1 nucleosome (T40N) in MH-binding state 分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... 著者 Chen, X, Wang, X, Liu, W, Ren, Y, Qu, X, Li, J, Yin, X, Xu, Y. 登録日 2022-09-21 公開日 2022-11-02 実験手法 ELECTRON MICROSCOPY (5.04 Å) 主引用文献 Structures of +1 nucleosome-bound PIC-Mediator complex. Science, 378, 2022
8GXS	PIC-Mediator in complex with +1 nucleosome (T40N) in H-binding state 分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... 著者 Chen, X, Wang, X, Liu, W, Ren, Y, Qu, X, Li, J, Yin, X. 登録日 2022-09-21 公開日 2022-11-02 実験手法 ELECTRON MICROSCOPY (4.16 Å) 主引用文献 Structures of +1 nucleosome-bound PIC-Mediator complex. Science, 378, 2022
5C4A	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Saphr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-17 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
5C4X	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Spahr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-18 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
5C3E	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Spahr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-17 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015

<12345678910111213141516>