PDB: 1573 件ウェブページステータス検索Chemie searchBIRD

---

6UMS	Crystal structure of MavC in complex with its substrate mimic in C222(1) space group 分子名称: MavC, Ubiquitin, Ubiquitin-conjugating enzyme E2 N 著者 Iyer, S, Puvar, K, Das, C. 登録日 2019-10-10 公開日 2020-05-27 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.344 Å) 主引用文献 Legionella effector MavC targets the Ube2N~Ub conjugate for noncanonical ubiquitination. Nat Commun, 11, 2020
6UH5	Structural basis of COMPASS eCM recognition of the H2Bub nucleosome 分子名称: Bre2, DNA (146-MER), H3 N-terminus, ... 著者 Hsu, P.L, Shi, H, Zheng, N. 登録日 2019-09-26 公開日 2019-11-20 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural Basis of H2B Ubiquitination-Dependent H3K4 Methylation by COMPASS. Mol.Cell, 76, 2019
6UMP	Crystal structure of MavC in complex with substrate mimic in P65 space group 分子名称: MavC, Ubiquitin, Ubiquitin-conjugating enzyme E2 N 著者 Puvar, K, Iyer, S, Luo, Z.Q, Das, C. 登録日 2019-10-10 公開日 2020-05-27 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Legionella effector MavC targets the Ube2N~Ub conjugate for noncanonical ubiquitination. Nat Commun, 11, 2020
6UZ7	K.lactis 80S ribosome with p/PE tRNA and eIF5B 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ... 著者 Fernandez, I.S, Huang, B.Y. 登録日 2019-11-14 公開日 2020-01-15 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Long-range interdomain communications in eIF5B regulate GTP hydrolysis and translation initiation. Proc.Natl.Acad.Sci.USA, 117, 2020
7K6Q	Active state Dot1 bound to the H4K16ac nucleosome 分子名称: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ... 著者 Valencia-Sanchez, M.I, De Ioannes, P.E, Miao, W, Truong, D.M, Lee, R, Armache, J.-P, Boeke, J.D, Armache, K.-J. 登録日 2020-09-21 公開日 2021-02-10 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Regulation of the Dot1 histone H3K79 methyltransferase by histone H4K16 acetylation. Science, 371, 2021
7K6P	Active state Dot1 bound to the unacetylated H4 nucleosome 分子名称: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ... 著者 Valencia-Sanchez, M.I, De Ioannes, P.E, Miao, W, Truong, D.M, Lee, R, Armache, J.-P, Boeke, J.D, Armache, K.-J. 登録日 2020-09-21 公開日 2021-02-10 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Regulation of the Dot1 histone H3K79 methyltransferase by histone H4K16 acetylation. Science, 371, 2021
7K5J	Structure of an E1-E2-ubiquitin thioester mimetic 分子名称: ADENOSINE MONOPHOSPHATE, Ubiquitin, Ubiquitin-activating enzyme E1 1, ... 著者 Yuan, L, Lv, Z, Olsen, S.K. 登録日 2020-09-16 公開日 2021-04-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.42 Å) 主引用文献 Crystal structures of an E1-E2-ubiquitin thioester mimetic reveal molecular mechanisms of transthioesterification. Nat Commun, 12, 2021
7CPV	Cryo-EM structure of 80S ribosome from mouse testis 分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S13, ... 著者 Huo, Y.G, He, X, Jiang, T, Qin, Y, Guo, X.J, Sha, J.H. 登録日 2020-08-08 公開日 2022-02-02 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.03 Å) 主引用文献 A male germ-cell-specific ribosome controls male fertility. Nature, 612, 2022
7CPU	Cryo-EM structure of 80S ribosome from mouse kidney 分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S13, ... 著者 Huo, Y.G, He, X, Jiang, T, Qin, Y, Guo, X.J, Sha, J.H. 登録日 2020-08-08 公開日 2022-02-02 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.82 Å) 主引用文献 A male germ-cell-specific ribosome controls male fertility. Nature, 612, 2022
7K5I	SARS-COV-2 nsp1 in complex with human 40S ribosome 分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ... 著者 Wang, L, Shi, M, Wu, H. 登録日 2020-09-16 公開日 2020-10-14 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 SARS-CoV-2 Nsp1 suppresses host but not viral translation through a bipartite mechanism. Biorxiv, 2020
7JQB	SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex 分子名称: 40S ribosomal protein S21, 40S ribosomal protein S24, 40S ribosomal protein S26, ... 著者 Yuan, S, Xiong, Y. 登録日 2020-08-10 公開日 2020-12-02 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Nonstructural Protein 1 of SARS-CoV-2 Is a Potent Pathogenicity Factor Redirecting Host Protein Synthesis Machinery toward Viral RNA. Mol.Cell, 80, 2020
7E8I	Structural insight into BRCA1-BARD1 complex recruitment to damaged chromatin 分子名称: BRCA1-associated RING domain protein 1, DNA (145-MER), Histone H2A, ... 著者 Dai, Y, Dai, L, Zhou, Z. 登録日 2021-03-01 公開日 2021-06-30 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural insight into BRCA1-BARD1 complex recruitment to damaged chromatin. Mol.Cell, 81, 2021
7JQC	SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex 分子名称: 40S ribosomal protein S21, 40S ribosomal protein S24, 40S ribosomal protein S26, ... 著者 Yuan, S, Xiong, Y. 登録日 2020-08-10 公開日 2020-12-02 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Nonstructural Protein 1 of SARS-CoV-2 Is a Potent Pathogenicity Factor Redirecting Host Protein Synthesis Machinery toward Viral RNA. Mol.Cell, 80, 2020
4P5O	Structure of an RBX1-UBC12~NEDD8-CUL1-DCN1 complex: a RING-E3-E2~ubiquitin-like protein-substrate intermediate trapped in action 分子名称: Cullin-1, DCN1-like protein 1, E3 ubiquitin-protein ligase RBX1, ... 著者 Scott, D.C, Schulman, B.A. 登録日 2014-03-18 公開日 2014-07-02 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.1071 Å) 主引用文献 Structure of a RING E3 Trapped in Action Reveals Ligation Mechanism for the Ubiquitin-like Protein NEDD8. Cell, 157, 2014
7EVO	The cryo-EM structure of the human 17S U2 snRNP 分子名称: HIV Tat-specific factor 1, PHD finger-like domain-containing protein 5A, RNA helicase, ... 著者 Zhang, X, Zhan, X, Shi, Y. 登録日 2021-05-21 公開日 2022-08-03 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Structural insights into branch site proofreading by human spliceosome. Nat.Struct.Mol.Biol., 2024
7LYC	Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A Lys13 and Lys15 in complex with BARD1 (residues 415-777) 分子名称: BRCA1-associated RING domain protein 1, DNA (146-MER), DNA (147-MER), ... 著者 Hu, Q, Botuyan, M.V, Zhao, D, Cui, D, Mer, E, Mer, G. 登録日 2021-03-06 公開日 2021-06-16 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (2.94 Å) 主引用文献 Mechanisms of BRCA1-BARD1 nucleosome recognition and ubiquitylation. Nature, 596, 2021
7LS1	80S ribosome from mouse bound to eEF2 (Class II) 分子名称: 28S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Loerch, S, Smith, P.R, Kunder, N, Stanowick, A.D, Lou, T.-F, Campbell, Z.T. 登録日 2021-02-17 公開日 2021-11-03 最終更新日 2021-12-08 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Functionally distinct roles for eEF2K in the control of ribosome availability and p-body abundance. Nat Commun, 12, 2021
7LS2	80S ribosome from mouse bound to eEF2 (Class I) 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Loerch, S, Smith, P.R, Kunder, N, Stanowick, A.D, Lou, T.-F, Campbell, Z.T. 登録日 2021-02-17 公開日 2021-11-03 最終更新日 2021-12-08 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Functionally distinct roles for eEF2K in the control of ribosome availability and p-body abundance. Nat Commun, 12, 2021
4Q5H	Shigella Effector Kinase OspG bound to AMPPNP and E2-Ub UbcH7-Ub Conjugate 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Polyubiquitin, ... 著者 Cygler, M, Grishin, A.M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI) 登録日 2014-04-16 公開日 2014-07-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.999 Å) 主引用文献 Structural Basis for the Inhibition of Host Protein Ubiquitination by Shigella Effector Kinase OspG. Structure, 22, 2014
4Q5E	Shigella Effector Kinase OspG bound to E2-Ub UbcH7-Ub Conjugate 分子名称: Polyubiquitin, Protein kinase OspG, Ubiquitin-conjugating enzyme E2 L3 著者 Cygler, M, Grishin, A.M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI) 登録日 2014-04-16 公開日 2014-07-02 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (1.869 Å) 主引用文献 Structural Basis for the Inhibition of Host Protein Ubiquitination by Shigella Effector Kinase OspG. Structure, 22, 2014
7F5S	human delta-METTL18 60S ribosome 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Takahashi, M, Kashiwagi, K, Ito, T. 登録日 2021-06-22 公開日 2022-06-22 実験手法 ELECTRON MICROSCOPY (2.72 Å) 主引用文献 METTL18-mediated histidine methylation of RPL3 modulates translation elongation for proteostasis maintenance. Elife, 11, 2022
2C9W	CRYSTAL STRUCTURE OF SOCS-2 IN COMPLEX WITH ELONGIN-B AND ELONGIN-C AT 1.9A RESOLUTION 分子名称: NICKEL (II) ION, SULFATE ION, SUPPRESSOR OF CYTOKINE SIGNALING 2, ... 著者 Debreczeni, J.E, Bullock, A, Amos, A, Savitsky, P, Barr, A, Burgess, N, Sundstrom, M, Weigelt, J, Arrowsmith, C, Edwards, A, Knapp, S. 登録日 2005-12-14 公開日 2006-02-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of the SOCS2-elongin C-elongin B complex defines a prototypical SOCS box ubiquitin ligase. Proc. Natl. Acad. Sci. U.S.A., 103, 2006
2EKE	Structure of a SUMO-binding-motif mimic bound to Smt3p-Ubc9p: conservation of a noncovalent Ubiquitin-like protein-E2 complex as a platform for selective interactions within a SUMO pathway 分子名称: SUMO-conjugating enzyme UBC9, Ubiquitin-like protein SMT3 著者 Duda, D.M, Schulman, B.A. 登録日 2007-03-23 公開日 2007-05-29 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of a SUMO-binding-motif Mimic Bound to Smt3p-Ubc9p: Conservation of a Non-covalent Ubiquitin-like Protein-E2 Complex as a Platform for Selective Interactions within a SUMO Pathway J.Mol.Biol., 369, 2007
6VEN	Yeast COMPASS in complex with a ubiquitinated nucleosome 分子名称: 601 DNA (146-MER), COMPASS component BRE2, COMPASS component SDC1, ... 著者 Worden, E.J, Wolberger, C. 登録日 2020-01-02 公開日 2020-01-15 最終更新日 2020-01-22 実験手法 ELECTRON MICROSCOPY (3.37 Å) 主引用文献 Structural basis for COMPASS recognition of an H2B-ubiquitinated nucleosome. Elife, 9, 2020
6VEL	Crystal Structure of Human E-cadherin bound by mouse monoclonal antibody 66E8Fab 分子名称: 66E8 Fab Heavy Chain, 66E8 Fab Light Chain, CALCIUM ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2020-01-02 公開日 2020-01-29 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Regulation of multiple dimeric states of E-cadherin by adhesion activating antibodies revealed through Cryo-EM and X-ray crystallography. Pnas Nexus, 1, 2022

<32333435363738394041424344454647>