Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4IXQ
DownloadVisualize
BU of 4ixq by Molmil
RT fs X-ray diffraction of Photosystem II, dark state
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Kern, J, Alonso-Mori, R, Tran, R, Hattne, J, Gildea, R.J, Echols, N, Gloeckner, C, Hellmich, J, Laksmono, H, Sierra, R.G, Lassalle-Kaiser, B, Koroidov, S, Lampe, A, Han, G, Gul, S, DiFiore, D, Milathianaki, D, Fry, A.R, Miahnahri, A, Schafer, D.W, Messerschmidt, M, Seibert, M.M, Koglin, J.E, Sokaras, D, Weng, T.-C, Sellberg, J, Latimer, M.J, Grosse-Kunstleve, R.W, Zwart, P.H, White, W.E, Glatzel, P, Adams, P.D, Bogan, M.J, Williams, G.J, Boutet, S, Messinger, J, Zouni, A, Sauter, N.K, Yachandra, V.K, Bergmann, U, Yano, J.
登録日2013-01-27
公開日2013-02-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (5.7 Å)
主引用文献Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature.
Science, 340, 2013
4HYV
DownloadVisualize
BU of 4hyv by Molmil
Pyruvate kinase (PYK) from Trypanosoma brucei in the presence of Magnesium, PEP and F26BP
分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, CHLORIDE ION, GLYCEROL, ...
著者Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
登録日2012-11-14
公開日2013-09-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献`In crystallo' substrate binding triggers major domain movements and reveals magnesium as a co-activator of Trypanosoma brucei pyruvate kinase.
Acta Crystallogr.,Sect.D, 69, 2013
3MBD
DownloadVisualize
BU of 3mbd by Molmil
Crystal structure of fructose bisphosphate aldolase from Encephalitozoon cuniculi, bound to phosphate
分子名称: CHLORIDE ION, Fructose-bisphosphate aldolase, PHOSPHATE ION
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2010-03-25
公開日2010-04-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of fructose bisphosphate aldolase from Encephalitozoon cuniculi.
Acta Crystallogr.,Sect.F, 67, 2011
7KC5
DownloadVisualize
BU of 7kc5 by Molmil
X-ray structure of Lfa-1 I domain in complex with BMS-68852 collected at 273 K
分子名称: 6-[(5S,9R)-9-(4-cyanophenyl)-3-(3,5-dichlorophenyl)-1-methyl-2,4-dioxo-1,3,7-triazaspiro[4.4]non-7-yl]pyridine-3-carboxylic acid, Integrin alpha-L, MAGNESIUM ION
著者Woldeyes, R.A, Hallenbeck, K.K, Pfaff, S.J, Lee, G, Cortez, S.V, Kelly, M.J, Akassoglou, K, Arkin, M.R, Fraser, J.S.
登録日2020-10-05
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Divergent conformational dynamics controls allosteric ligand accessibility across evolutionarily related I-domain-containing integrins
To Be Published
7KC3
DownloadVisualize
BU of 7kc3 by Molmil
X-ray structure of Lfa-1 I domain collected at 273 K
分子名称: Integrin alpha-L, MAGNESIUM ION
著者Woldeyes, R.A, Hallenbeck, K.K, Pfaff, S.J, Lee, G, Cortez, S.V, Kelly, M.J, Akassoglou, K, Arkin, M.R, Fraser, J.S.
登録日2020-10-05
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Divergent conformational dynamics controls allosteric ligand accessibility across evolutionarily related I-domain-containing integrins
To Be Published
7KC6
DownloadVisualize
BU of 7kc6 by Molmil
X-ray structure of Lfa-1 I domain in complex with Lovastatin collected at 273 K
分子名称: Integrin alpha-L, LOVASTATIN, MAGNESIUM ION
著者Woldeyes, R.A, Hallenbeck, K.K, Pfaff, S.J, Lee, G, Cortez, S.V, Kelly, M.J, Akassoglou, K, Arkin, M.R, Fraser, J.S.
登録日2020-10-05
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Divergent conformational dynamics controls allosteric ligand accessibility across evolutionarily related I-domain-containing integrins
To Be Published
6F9A
DownloadVisualize
BU of 6f9a by Molmil
Solution structure of the MRH domain of Yos9 complexed with alpha3,alpha6-Man5
分子名称: ER quality-control lectin
著者Kniss, A, Kazemi, S, Lohr, F, Guntert, P, Dotsch, V.
登録日2017-12-14
公開日2019-01-30
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of the MRH domain of Yos9 complexed with alpha3,alpha6-Man5
To Be Published
6MKB
DownloadVisualize
BU of 6mkb by Molmil
Crystal structure of murine 4-1BB ligand
分子名称: SODIUM ION, SULFATE ION, Tumor necrosis factor ligand superfamily member 9, ...
著者Bitra, A, Zajonc, D.M, Doukov, T.
登録日2018-09-25
公開日2018-12-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the m4-1BB/4-1BBL complex reveals an unusual dimeric ligand that undergoes structural changes upon 4-1BB receptor binding.
J. Biol. Chem., 294, 2019
6MKZ
DownloadVisualize
BU of 6mkz by Molmil
Crystal structure of murine 4-1BB/4-1BBL complex
分子名称: Tumor necrosis factor ligand superfamily member 9, Tumor necrosis factor receptor superfamily member 9, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Bitra, A, Zajonc, D.M, Doukov, T.
登録日2018-09-26
公開日2018-12-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structure of the m4-1BB/4-1BBL complex reveals an unusual dimeric ligand that undergoes structural changes upon 4-1BB receptor binding.
J. Biol. Chem., 294, 2019
4M40
DownloadVisualize
BU of 4m40 by Molmil
Crystal structure of hemagglutinin of influenza virus B/Yamanashi/166/1998
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
著者Ni, F, Kondrashkina, E, Wang, Q.
登録日2013-08-06
公開日2013-09-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.54 Å)
主引用文献Structural basis for the divergent evolution of influenza B virus hemagglutinin.
Virology, 446, 2013
6PAL
DownloadVisualize
BU of 6pal by Molmil
Bacteroides uniformis endo-laminarinase BuGH158 from the beta(1,3)-glucan utilization locus
分子名称: ACETATE ION, SULFATE ION, Uncharacterized protein
著者Tamura, K, Brumer, H, van Petegem, F.
登録日2019-06-11
公開日2020-04-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.818 Å)
主引用文献Synergy between Cell Surface Glycosidases and Glycan-Binding Proteins Dictates the Utilization of Specific Beta(1,3)-Glucans by Human GutBacteroides.
Mbio, 11, 2020
6F99
DownloadVisualize
BU of 6f99 by Molmil
Solution structure of the MRH domain of Yos9
分子名称: ER quality-control lectin
著者Kniss, A, Kazemi, S, Lohr, F, Guntert, P, Dotsch, V.
登録日2017-12-14
公開日2019-01-30
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of the MRH domain of Yos9
To Be Published
8GD7
DownloadVisualize
BU of 8gd7 by Molmil
Loop Deleted DNA Polymerase Theta Polymerase Domain in Complex with Double Strand DNA Overhang and Inhibitor
分子名称: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, 2-(3-methyl-2-oxoimidazolidin-1-yl)-4,6-bis(trifluoromethyl)phenyl (4-fluorophenyl)methylcarbamate, DNA Primer, ...
著者Fried, W.A, Chen, X.S, Li, S.X.
登録日2023-03-03
公開日2024-06-19
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Discovery of a small-molecule inhibitor that traps Pol theta on DNA and synergizes with PARP inhibitors.
Nat Commun, 15, 2024
3MQW
DownloadVisualize
BU of 3mqw by Molmil
Crystal structure of a putative endoribonuclease L-PSP from Entamoeba histolytica with higher solvent content and an ordered N-terminal tag
分子名称: CITRATE ANION, GLYCEROL, SULFATE ION, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2010-04-28
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a putative endoribonuclease L-PSP from Entamoeba histolytica
To be published
6TCK
DownloadVisualize
BU of 6tck by Molmil
Crystal structure of the ATP binding domain of S. aureus GyrB complexed with ULD-2
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-[[3,4-bis(chloranyl)-5-methyl-1~{H}-pyrrol-2-yl]carbonylamino]-4-phenylmethoxy-1,3-benzothiazole-6-carboxylic acid, CALCIUM ION, ...
著者Welin, M, Kimbung, R, Focht, D.
登録日2019-11-06
公開日2020-09-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rational design of balanced dual-targeting antibiotics with limited resistance.
Plos Biol., 18, 2020
4JJM
DownloadVisualize
BU of 4jjm by Molmil
Structure of a cyclophilin from Citrus sinensis (CsCyp) in complex with cyclosporin A
分子名称: Peptidyl-prolyl cis-trans isomerase, cyclosporin A
著者Campos, B.M, Ambrosio, A.L.B, Souza, T.A.C.B, Barbosa, J.A.R.G, Benedetti, C.E.
登録日2013-03-08
公開日2013-06-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献A redox 2-cys mechanism regulates the catalytic activity of divergent cyclophilins.
Plant Physiol., 162, 2013
4CLV
DownloadVisualize
BU of 4clv by Molmil
Crystal Structure of dodecylphosphocholine-solubilized NccX from Cupriavidus metallidurans 31A
分子名称: NICKEL-COBALT-CADMIUM RESISTANCE PROTEIN NCCX, PHOSPHATE ION, PHOSPHOCHOLINE, ...
著者Legrand, P, Girard, E, Petit-Hartlein, I, Maillard, A.P, Coves, J.
登録日2014-01-15
公開日2014-10-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献The X-Ray Structure of Nccx from Cupriavidus Metallidurans 31A Illustrates Potential Dangers of Detergent Solubilization When Generating and Interpreting Crystal Structures of Membrane Proteins.
J.Biol.Chem., 289, 2014
7JT4
DownloadVisualize
BU of 7jt4 by Molmil
Crystal Structure of BPTF bromodomain labelled with 5-fluoro-tryptophan
分子名称: Nucleosome-remodeling factor subunit BPTF
著者Johnson, J.A, Shi, K, Aihara, H, Pomerantz, W.C.K.
登録日2020-08-17
公開日2021-07-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Selectivity, ligand deconstruction, and cellular activity analysis of a BPTF bromodomain inhibitor
Org.Biomol.Chem., 17, 2019
6TRU
DownloadVisualize
BU of 6tru by Molmil
Crystal structure of the N-terminal half of the TFIIH subunit p52
分子名称: RNA polymerase II transcription factor B subunit 2
著者Koelmel, W, Kuper, J, Schoenwetter, E, Kisker, C.
登録日2019-12-19
公開日2020-10-21
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献How to limit the speed of a motor: the intricate regulation of the XPB ATPase and translocase in TFIIH.
Nucleic Acids Res., 48, 2020
6NW9
DownloadVisualize
BU of 6nw9 by Molmil
CRYSTAL STRUCTURE OF A TAILSPIKE PROTEIN 3 (TSP3, ORF212) FROM ESCHERICHIA COLI O157:H7 BACTERIOPHAGE CBA120
分子名称: 1,2-ETHANEDIOL, CARBONATE ION, CHLORIDE ION, ...
著者Greenfield, J.Y, Herzberg, O.
登録日2019-02-06
公開日2019-06-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and tailspike glycosidase machinery of ORF212 from E. coli O157:H7 phage CBA120 (TSP3).
Sci Rep, 9, 2019
3N03
DownloadVisualize
BU of 3n03 by Molmil
Thaumatin crystals grown from drops
分子名称: L(+)-TARTARIC ACID, Thaumatin-1
著者Mathews, I.I.
登録日2010-05-13
公開日2011-05-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Diffraction study of protein crystals grown in cryoloops and micromounts.
J.Appl.Crystallogr., 43, 2010
6NQY
DownloadVisualize
BU of 6nqy by Molmil
Flagellar protein FcpA from Leptospira biflexa / ab-centered monoclinic form
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, Flagellar coiling protein A, ...
著者Mechaly, A, Larrieux, N, Trajtenberg, F, Buschiazzo, A.
登録日2019-01-22
公開日2020-01-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An asymmetric sheath controls flagellar supercoiling and motility in the Leptospira spirochete.
Elife, 9, 2020
6GDA
DownloadVisualize
BU of 6gda by Molmil
Cytochrome c in complex with Sulfonato-calix[8]arene, P43212 form soaked with Spermine
分子名称: Cytochrome c iso-1, HEME C, SPERMINE, ...
著者Rennie, M.L, Fox, G.C, Crowley, P.B.
登録日2018-04-23
公開日2019-05-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Tuning Protein Frameworks via Auxiliary Supramolecular Interactions.
Acs Nano, 13, 2019
3MZQ
DownloadVisualize
BU of 3mzq by Molmil
RNase crystals grown by the hanging drop method
分子名称: CHLORIDE ION, Ribonuclease pancreatic, SULFATE ION
著者Mathews, I.I.
登録日2010-05-12
公開日2011-05-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Diffraction study of protein crystals grown in cryoloops and micromounts.
J.Appl.Crystallogr., 43, 2010
3MZR
DownloadVisualize
BU of 3mzr by Molmil
RNase crystals grown in loops/micromounts
分子名称: CHLORIDE ION, Ribonuclease pancreatic, SULFATE ION
著者Mathews, I.I.
登録日2010-05-12
公開日2011-05-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Diffraction study of protein crystals grown in cryoloops and micromounts.
J.Appl.Crystallogr., 43, 2010

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon