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8E16
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Mycobacterium phage Che8
分子名称: Major capsid protein, gp6
著者Podgorski, J.M, White, S.J.
登録日2022-08-09
公開日2023-02-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献A structural dendrogram of the actinobacteriophage major capsid proteins provides important structural insights into the evolution of capsid stability.
Structure, 31, 2023
8E2A
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Human Dis3L2 in complex with hairpin D-U7
分子名称: DIS3-like exonuclease 2, RNA hairpin D-U7
著者Meze, K, Thomas, D.R, Joshua-Tor, L.
登録日2022-08-14
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献A shape-shifting nuclease unravels structured RNA.
Nat.Struct.Mol.Biol., 30, 2023
8DZB
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Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor 11
分子名称: 3C-like proteinase nsp5, GLYCEROL, benzyl {(3S)-1-[(2S)-1-({(2S,3R)-4-(cyclopropylamino)-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-5-oxopyrrolidin-3-yl}carbamate
著者Sacco, M, Chen, Y.
登録日2022-08-06
公開日2023-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Development of the Safe and Broad-Spectrum Aldehyde and Ketoamide Mpro inhibitors Derived from the Constrained alpha , gamma-AA Peptide Scaffold.
Chemistry, 29, 2023
5FFO
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Integrin alpha V beta 6 in complex with pro-TGF-beta
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Dong, X, Zhao, B, Springer, T.A.
登録日2015-12-18
公開日2017-01-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Force interacts with macromolecular structure in activation of TGF-beta.
Nature, 542, 2017
8E17
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BRD4-D1 in complex with BET inhibitor
分子名称: (4P,6M)-6-[1-(2-fluoroethyl)-1H-1,2,3-triazol-4-yl]-4-[5-(methanesulfonyl)-2-methoxyphenyl]-2-methylisoquinolin-1(2H)-one, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
著者Gorman, M.A, Fitzgerald, C.G.D, White, J.M, Parker, M.W.
登録日2022-08-09
公開日2023-03-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Bromodomain and extraterminal protein-targeted probe enables tumour visualisation in vivo using positron emission tomography.
Chem.Commun.(Camb.), 59, 2023
8DZC
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Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor 17
分子名称: (3,5-difluorophenyl)methyl {(3S)-1-[(2S)-1-({(2S,3R)-4-(cyclopropylamino)-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-6-oxopiperidin-3-yl}carbamate, 3C-like proteinase nsp5, GLYCEROL
著者Sacco, M, Chen, Y.
登録日2022-08-06
公開日2023-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Development of the Safe and Broad-Spectrum Aldehyde and Ketoamide Mpro inhibitors Derived from the Constrained alpha , gamma-AA Peptide Scaffold.
Chemistry, 29, 2023
8E3W
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BRD4-D1 in complex with BET inhibitor
分子名称: (4P)-4-[2-(cyclopropylmethoxy)-5-(methanesulfonyl)phenyl]-2-methylisoquinolin-1(2H)-one, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
著者Gorman, M.A, Fitzgerald, C.G.D, White, J.M, Parker, M.W.
登録日2022-08-17
公開日2023-03-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Bromodomain and extraterminal protein-targeted probe enables tumour visualisation in vivo using positron emission tomography.
Chem.Commun.(Camb.), 59, 2023
8DYR
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BRD4-D1 in complex with BET inhibitor
分子名称: (4P,6P)-4-[2-(cyclopropylmethoxy)-5-(methanesulfonyl)phenyl]-6-[1-(2-fluoroethyl)-1H-1,2,3-triazol-4-yl]-2-methylisoquinolin-1(2H)-one, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
著者Gorman, M.A, Fitzgerald, C.G.D, White, J.M, Parker, M.W.
登録日2022-08-04
公開日2023-03-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Bromodomain and extraterminal protein-targeted probe enables tumour visualisation in vivo using positron emission tomography.
Chem.Commun.(Camb.), 59, 2023
5N6B
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Human Leukocyte Antigen Class I A02 Carrying LLWNPGMAV
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-2-microglobulin, ...
著者Rizkallah, P.J, Cole, D.K, Fuller, A, Bulek, A.M, Bovay, A.
登録日2017-02-14
公開日2017-10-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献T cell receptor alpha variable 12-2 bias in the immunodominant response to Yellow fever virus.
Eur. J. Immunol., 48, 2018
5NFU
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The structure of the polo-box domain (PBD) of polo-like kinase 1 (Plk1) in complex with LHSpTA peptide
分子名称: Ac-LEU-HIS-SER-(TPO)-ALA, Serine/threonine-protein kinase PLK1
著者Kunciw, D.L, Rossmann, M, De Fusco, C, Spring, D.R, Hyvonen, M.
登録日2017-03-16
公開日2018-05-16
最終更新日2023-03-08
実験手法X-RAY DIFFRACTION (1.809 Å)
主引用文献A cryptic hydrophobic pocket in the polo-box domain of the polo-like kinase PLK1 regulates substrate recognition and mitotic chromosome segregation.
Sci Rep, 9, 2019
4QOZ
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Crystal structure of the histone mRNA stem-loop, stem-loop binding protein (phosphorylated), and 3'hExo ternary complex
分子名称: 3'-5' exoribonuclease 1, Histone RNA hairpin-binding protein, histone mRNA stem-loop
著者Tan, D, Tong, L.
登録日2014-06-21
公開日2014-07-23
最終更新日2014-08-06
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation.
Proc.Natl.Acad.Sci.USA, 111, 2014
5C8I
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Joint X-ray/neutron structure of Human Carbonic Anhydrase II in complex with Methazolamide
分子名称: Carbonic anhydrase 2, N-(3-methyl-5-sulfamoyl-1,3,4-thiadiazol-2(3H)-ylidene)acetamide, ZINC ION
著者Aggarwal, M, Kovalevsky, A.Y, Fisher, S.Z, McKenna, R.
登録日2015-06-25
公開日2016-07-20
最終更新日2024-03-06
実験手法NEUTRON DIFFRACTION (1.56 Å), X-RAY DIFFRACTION
主引用文献Neutron structure of human carbonic anhydrase II in complex with methazolamide: mapping the solvent and hydrogen-bonding patterns of an effective clinical drug.
IUCrJ, 3, 2016
8DQN
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Crystal structure of isoaspartyl dipeptidase from Leucothrix mucor DSM2157
分子名称: GLYCEROL, Isoaspartyl dipeptidase, PHOSPHATE ION, ...
著者Sharon, I, Schmeing, T.M.
登録日2022-07-19
公開日2023-04-26
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Bioinformatics of cyanophycin metabolism genes and characterization of promiscuous isoaspartyl dipeptidases that catalyze the final step of cyanophycin degradation.
Sci Rep, 13, 2023
5NMK
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HLA A02 presenting SLFNTIAVL
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
著者Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
登録日2017-04-06
公開日2017-11-15
最終更新日2017-12-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope.
Front Immunol, 8, 2017
6UIX
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Cryo-EM structure of human CALHM2 gap junction
分子名称: Calcium homeostasis modulator protein 2
著者Lu, W, Du, J, Choi, W.
登録日2019-10-01
公開日2019-11-27
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The structures and gating mechanism of human calcium homeostasis modulator 2.
Nature, 576, 2019
8B3K
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Crystal structure of human Plexin-B1 (20-535) in the unbound state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, Plexin-B1
著者Cowan, R, Hall, G, Carr, M.
登録日2022-09-16
公開日2023-05-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.685 Å)
主引用文献Nanobody inhibitors of Plexin-B1 identify allostery in plexin-semaphorin interactions and signaling.
J.Biol.Chem., 299, 2023
8BGS
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BU of 8bgs by Molmil
Tau Paired Helical Filament from Extracellular Vesicles from Alzheimer's disease brain
分子名称: Microtubule-associated protein tau
著者Behr, T.S, Ryskeldi-Falcon, B.
登録日2022-10-28
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Tau filaments are tethered within brain extracellular vesicles in Alzheimer's disease.
Biorxiv, 2023
5GTC
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Crystal structure of complex between DMAP-SH conjugated with a Kaposi's sarcoma herpesvirus LANA peptide (5-15) and nucleosome core particle
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ...
著者Arimura, Y, Kato, D, Suto, H, Kurumizaka, H, Kawashima, S.A, Yamatsugu, K, Kanai, M.
登録日2016-08-19
公開日2017-06-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Synthetic Posttranslational Modifications: Chemical Catalyst-Driven Regioselective Histone Acylation of Native Chromatin.
J. Am. Chem. Soc., 139, 2017
8BGV
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Tau Paired Helical Filament from Cellular Fraction of Alzheimer's disease brain
分子名称: Microtubule-associated protein tau
著者Behr, T.S, Ryskeldi-Falcon, B.
登録日2022-10-28
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Tau filaments are tethered within brain extracellular vesicles in Alzheimer's disease.
Biorxiv, 2023
1HCM
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BU of 1hcm by Molmil
Cytochrome cd1 Nitrite Reductase, oxidised from from tetragonal crystals
分子名称: CYTOCHROME CD1 NITRITE REDUCTASE, HEME C, HEME D, ...
著者Sjogren, T, Hajdu, J.
登録日2001-05-05
公開日2001-08-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Structure of an Alternative Form of Paracoccus Pantotrophus Cytochrome Cd1 Nitrite Reductase
J.Biol.Chem., 276, 2001
4QX0
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Cry3A Toxin structure obtained by Serial Femtosecond Crystallography from in vivo grown crystals isolated from Bacillus thuringiensis and data processed with the cctbx.xfel software suite
分子名称: Pesticidal crystal protein cry3Aa
著者Sawaya, M.R, Cascio, D, Gingery, M, Rodriguez, J, Goldschmidt, L, Colletier, J.-P, Messerschmidt, M, Boutet, S, Koglin, J.E, Williams, G.J, Brewster, A.S, Nass, K, Hattne, J, Botha, S, Doak, R.B, Shoeman, R.L, DePonte, D.P, Park, H.-W, Federici, B.A, Sauter, N.K, Schlichting, I, Eisenberg, D.
登録日2014-07-17
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Protein crystal structure obtained at 2.9 angstrom resolution from injecting bacterial cells into an X-ray free-electron laser beam.
Proc.Natl.Acad.Sci.USA, 111, 2014
5NID
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Crystal structure of human LTA4H mutant D375N in open conformation (crystal form II)
分子名称: Leukotriene A-4 hydrolase, ZINC ION
著者Stsiapanava, A.
登録日2017-03-23
公開日2017-08-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.568 Å)
主引用文献Capturing LTA4 hydrolase in action: Insights to the chemistry and dynamics of chemotactic LTB4 synthesis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5NIA
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Crystal structure of human LTA4H mutant D375N in open conformation (crystal form I)
分子名称: Leukotriene A-4 hydrolase, ZINC ION
著者Stsiapanava, A.
登録日2017-03-23
公開日2017-08-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.764 Å)
主引用文献Capturing LTA4 hydrolase in action: Insights to the chemistry and dynamics of chemotactic LTB4 synthesis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5NJ1
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The X-ray structure of the adduct formed in the reaction between hen egg white lysozyme and arsenoplatin-1
分子名称: 1,2-ETHANEDIOL, Lysozyme C, NITRATE ION, ...
著者Ferraro, G, Merlino, A.
登録日2017-03-27
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Arsenoplatin-1 Is a Dual Pharmacophore Anticancer Agent.
J.Am.Chem.Soc., 141, 2019
5CHA
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THE REFINEMENT AND THE STRUCTURE OF THE DIMER OF ALPHA-*CHYMOTRYPSIN AT 1.67-*ANGSTROMS RESOLUTION
分子名称: ALPHA-CHYMOTRYPSIN A
著者Blevins, R.A, Tulinsky, A.
登録日1985-01-22
公開日1985-04-01
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献The refinement and the structure of the dimer of alpha-chymotrypsin at 1.67-A resolution.
J.Biol.Chem., 260, 1985

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