PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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3SDA	Crystal structure of autoreactive-Valpha14-Vbeta6 NKT TCR in complex with CD1d-beta-galactosylceramide 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ... 著者 Clarke, A.J, Rossjohn, J. 登録日 2011-06-08 公開日 2011-10-05 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Recognition of beta-linked self glycolipids mediated by natural killer T cell antigen receptors Nat.Immunol., 12, 2011
3SDC	Crystal structure of autoreactive-Valpha14-Vbeta6 NKT TCR in complex with CD1d-globotrihexosylceramide 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ... 著者 Clarke, A.J, Rossjohn, J. 登録日 2011-06-09 公開日 2011-10-05 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Recognition of beta-linked self glycolipids mediated by natural killer T cell antigen receptors Nat.Immunol., 12, 2011
3SJV	Crystal structure of the RL42 TCR in complex with HLA-B8-FLR 分子名称: Beta-2-microglobulin, Epstein-Barr nuclear antigen 3, HLA class I histocompatibility antigen, ... 著者 Gras, S, Wilmann, P.G, Zhenjun, C, Hanim, H, Yu Chih, L, Kjer-Nielsen, L, Purcell, A.W, Burrows, S.R, Mccluskey, J, Rossjohn, J. 登録日 2011-06-22 公開日 2012-02-29 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 A structural basis for varied alpha-beta TCR usage against an immunodominant EBV antigen restricted to a HLA-B8 molecule. J.Immunol., 188, 2012
3DTB	The structure of rat cytosolic PEPCK in complex with phosphoglycolate and GDP 分子名称: 2-PHOSPHOGLYCOLIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BICARBONATE ION, ... 著者 Sullivan, S.M, Holyoak, T. 登録日 2008-07-14 公開日 2008-08-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Enzymes with lid-gated active sites must operate by an induced fit mechanism instead of conformational selection. Proc.Natl.Acad.Sci.Usa, 105, 2008
3DT2	The structure of rat cytosolic PEPCK in complex with oxalate and GTP 分子名称: GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, OXALATE ION, ... 著者 Sullivan, S.M, Holyoak, T. 登録日 2008-07-14 公開日 2008-08-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Enzymes with lid-gated active sites must operate by an induced fit mechanism instead of conformational selection. Proc.Natl.Acad.Sci.Usa, 105, 2008
3DT7	The structure of rat cytosolic PEPCK in complex with beta-sulfopyruvate and GTP 分子名称: 2-ETHOXYETHANOL, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ... 著者 Sullivan, S.M, Holyoak, T. 登録日 2008-07-14 公開日 2008-08-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Enzymes with lid-gated active sites must operate by an induced fit mechanism instead of conformational selection. Proc.Natl.Acad.Sci.Usa, 105, 2008
2IU3	Crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase 分子名称: 1,5-DIHYDROIMIDAZO[4,5-C][1,2,6]THIADIAZIN-4(3H)-ONE 2,2-DIOXIDE, BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH, POTASSIUM ION 著者 Xu, L, Chong, Y, Hwang, I, D'Onofrio, A, Amore, K, Beardsley, G.P, Li, C, Olson, A.J, Boger, D.L, Wilson, I.A. 登録日 2006-05-27 公開日 2007-02-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structure-based design, synthesis, evaluation, and crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase. J. Biol. Chem., 282, 2007
2IU0	crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase 分子名称: 1,5-DIHYDROIMIDAZO[4,5-C][1,2,6]THIADIAZIN-4(3H)-ONE 2,2-DIOXIDE, BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH, POTASSIUM ION 著者 Xu, L, Chong, Y, Hwang, I, Onofrio, A.D, Amore, K, Beardsley, G.P, Li, C, Olson, A.J, Boger, D.L, Wilson, I.A. 登録日 2006-05-26 公開日 2007-02-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.53 Å) 主引用文献 Structure-Based Design, Synthesis, Evaluation, and Crystal Structures of Transition State Analogue Inhibitors of Inosine Monophosphate Cyclohydrolase J.Biol.Chem., 282, 2007
3EVE	Crystal structure of GpppA complex of yellow fever virus methyltransferase and S-adenosyl-L-homocysteine 分子名称: GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE 著者 Thompson, A.A. 登録日 2008-10-13 公開日 2009-01-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Analysis of flavivirus NS5 methyltransferase cap binding. J.Mol.Biol., 385, 2009
1VVJ	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-05-24 公開日 2014-08-06 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (3.440001 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
3EVF	Crystal structure of Me7-GpppA complex of yellow fever virus methyltransferase and S-adenosyl-L-homocysteine 分子名称: P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE 著者 Thompson, A.A, Geiss, B.J, Peersen, O.B. 登録日 2008-10-13 公開日 2009-01-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Analysis of flavivirus NS5 methyltransferase cap binding. J.Mol.Biol., 385, 2009
1VY5	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Polikanov, Y.S, Steitz, T.A, Innis, C.A. 登録日 2014-05-13 公開日 2014-08-20 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome. Nat.Struct.Mol.Biol., 21, 2014
8GHN	Composite model of the yeast Hir Complex with Asf1/H3/H4 分子名称: Histone H3, Histone H4, Histone chaperone, ... 著者 Kim, H.J, Murakami, K. 登録日 2023-03-10 公開日 2024-07-17 最終更新日 2024-08-07 実験手法 ELECTRON MICROSCOPY (2.96 Å) 主引用文献 Structure of the Hir histone chaperone complex. Mol.Cell, 84, 2024
8GHM	Hir1 WD40 domains and Asf1/H3/H4 分子名称: Histone H3, Histone H4, Histone chaperone, ... 著者 Kim, H.J, Murakami, K. 登録日 2023-03-10 公開日 2024-07-10 最終更新日 2024-08-07 実験手法 ELECTRON MICROSCOPY (12 Å) 主引用文献 Structure of the Hir histone chaperone complex. Mol.Cell, 84, 2024
3EVC	Crystal structure of GTP complex of yellow fever virus methyltransferase and S-adenosyl-L-homocysteine 分子名称: GUANOSINE-5'-TRIPHOSPHATE, RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE 著者 Thompson, A.A, Geiss, B.J, Peersen, O.B. 登録日 2008-10-13 公開日 2009-01-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Analysis of flavivirus NS5 methyltransferase cap binding. J.Mol.Biol., 385, 2009
3EVA	Crystal structure of yellow fever virus methyltransferase complexed with S-adenosyl-L-homocysteine 分子名称: RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE 著者 Thompson, A.A, Geiss, B.J, Peersen, O.B. 登録日 2008-10-13 公開日 2009-01-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Analysis of flavivirus NS5 methyltransferase cap binding. J.Mol.Biol., 385, 2009
1VY7	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Polikanov, Y.S, Steitz, T.A, Innis, C.A. 登録日 2014-05-13 公開日 2014-08-20 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome. Nat.Struct.Mol.Biol., 21, 2014
1VY6	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Polikanov, Y.S, Steitz, T.A, Innis, C.A. 登録日 2014-05-13 公開日 2014-08-20 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome. Nat.Struct.Mol.Biol., 21, 2014
3EVB	Crystal structure of yellow fever virus methyltransferase complexed with S-adenosyl-L-homocysteine 分子名称: RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE 著者 Thompson, A.A, Geiss, B.J, Peersen, O.B. 登録日 2008-10-13 公開日 2009-01-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Analysis of flavivirus NS5 methyltransferase cap binding. J.Mol.Biol., 385, 2009
3EVD	Crystal structure of GTP complex of yellow fever virus methyltransferase and S-adenosyl-L-homocysteine 分子名称: GUANOSINE-5'-TRIPHOSPHATE, RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE 著者 Thompson, A.A, Geiss, B.J, Peersen, O.B. 登録日 2008-10-13 公開日 2009-01-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Analysis of flavivirus NS5 methyltransferase cap binding. J.Mol.Biol., 385, 2009
1VY4	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Polikanov, Y.S, Steitz, T.A, Innis, C.A. 登録日 2014-05-13 公開日 2014-08-20 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome. Nat.Struct.Mol.Biol., 21, 2014
3EVG	Crystal structure of Dengue-2 virus methyltransferase complexed with S-adenosyl-L-homocysteine 分子名称: RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION 著者 Thompson, A.A, Geiss, B.J, Peersen, O.B. 登録日 2008-10-13 公開日 2009-01-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Analysis of flavivirus NS5 methyltransferase cap binding. J.Mol.Biol., 385, 2009
2J0Q	The crystal structure of the Exon Junction Complex at 3.2 A resolution 分子名称: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ATP-DEPENDENT RNA HELICASE DDX48, MAGNESIUM ION, ... 著者 Bono, F, Ebert, J, Lorentzen, E, Conti, E. 登録日 2006-08-04 公開日 2006-08-30 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 The Crystal Structure of the Exon Junction Complex Reveals How It Maintains a Stable Grip on Mrna. Cell(Cambridge,Mass.), 126, 2006
7APU	Structure of Adenylate kinase from Escherichia coli in complex with two ADP molecules refined at 1.36 A resolution. 分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, SODIUM ION 著者 Grundstom, C, Wolf-Watz, M, Nam, K, Sauer, U.H. 登録日 2020-10-19 公開日 2022-03-02 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 Dynamic Connection between Enzymatic Catalysis and Collective Protein Motions. Biochemistry, 60, 2021
4JEL	Structure of MilB Streptomyces rimofaciens CMP N-glycosidase 分子名称: CMP/hydroxymethyl CMP hydrolase, SULFATE ION 著者 Sikowitz, M.D, Cooper, L.E, Begley, T.P, Kaminski, P.A, Ealick, S.E. 登録日 2013-02-27 公開日 2013-09-11 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.952 Å) 主引用文献 Reversal of the substrate specificity of CMP N-glycosidase to dCMP. Biochemistry, 52, 2013

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