PDB: 11971 件ウェブページステータス検索Chemie searchBIRD

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4QLC	Crystal structure of chromatosome at 3.5 angstrom resolution 分子名称: CITRIC ACID, DNA (167-mer), H5, ... 著者 Jiang, J.S, Zhou, B.R, Xiao, T.S, Bai, Y.W. 登録日 2014-06-11 公開日 2015-07-22 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.503 Å) 主引用文献 Structural Mechanisms of Nucleosome Recognition by Linker Histones. Mol.Cell, 33 Suppl 1, 2015
8DS8	Crystal structure of human TNRC18 BAH domain in complex with H3K9me3 peptide 分子名称: Histone H3.1, Trinucleotide repeat-containing gene 18 protein 著者 Song, J.K, Lu, J.W. 登録日 2022-07-21 公開日 2023-08-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 TNRC18 engages H3K9me3 to mediate silencing of endogenous retrotransposons. Nature, 623, 2023
6DZT	Cryo-EM structure of nucleosome in complex with a single chain antibody fragment 分子名称: DNA (147-MER), Histone H2A, Histone H2B, ... 著者 Yadav, K.N.S, Zhou, B.-R. 登録日 2018-07-05 公開日 2019-05-22 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (2.99 Å) 主引用文献 Atomic resolution cryo-EM structure of a native-like CENP-A nucleosome aided by an antibody fragment. Nat Commun, 10, 2019
2HIO	HISTONE OCTAMER (CHICKEN), CHROMOSOMAL PROTEIN 分子名称: PROTEIN (HISTONE H2A), PROTEIN (HISTONE H2B), PROTEIN (HISTONE H3), ... 著者 Arents, G, Moudrianakis, E.N. 登録日 1999-06-15 公開日 2000-01-12 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The nucleosomal core histone octamer at 3.1 A resolution: a tripartite protein assembly and a left-handed superhelix. Proc.Natl.Acad.Sci.USA, 88, 1991
6Z2A	Structure of Clr4 mutant - F256A/F310A/F427A bound to SAH 分子名称: Histone-lysine N-methyltransferase, H3 lysine-9 specific, MAGNESIUM ION, ... 著者 Stirpe, A, Schalch, T. 登録日 2020-05-15 公開日 2021-05-26 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.456 Å) 主引用文献 SUV39 SET domains mediate crosstalk of heterochromatic histone marks. Elife, 10, 2021
3KXB	Structural characterization of H3K56Q nucleosomes and nucleosomal arrays 分子名称: Histone H2A, Histone H2B 1.1, Histone H3.2, ... 著者 Clark, N.J, Lilyestrom, W.G. 登録日 2009-12-02 公開日 2010-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural characterization of H3K56Q nucleosomes and nucleosomal arrays. Biochim.Biophys.Acta, 1799, 2010
5OMX	X-ray Structure of the H2A-N38C Nucleosome Core Particle 分子名称: CHLORIDE ION, DNA (147-MER), Histone H2A, ... 著者 Frouws, T.D, Richmond, T.J. 登録日 2017-08-02 公開日 2017-11-15 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 Site-Specific Disulfide Crosslinked Nucleosomes with Enhanced Stability. J. Mol. Biol., 430, 2018
4FT4	crystal structure of Zea mays ZMET2 in complex H3(1-32)K9me2 peptide and SAH 分子名称: DNA (cytosine-5)-methyltransferase 1, H3(1-32)K9me2 peptide, S-ADENOSYL-L-HOMOCYSTEINE 著者 Du, J, Patel, D.J. 登録日 2012-06-27 公開日 2012-10-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants. Cell(Cambridge,Mass.), 151, 2012
5ONW	X-Ray crystal structure of a nucleosome core particle with its DNA site-specifically crosslinked to the histone octamer and the two H2A/H2B dimers crosslinked via H2A N38C 分子名称: CHLORIDE ION, DNA (147-MER), Histone H2A, ... 著者 Frouws, T.D, Barth, P.D, Richmond, T.J. 登録日 2017-08-04 公開日 2017-11-22 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Site-Specific Disulfide Crosslinked Nucleosomes with Enhanced Stability. J. Mol. Biol., 430, 2018
2WP1	Structure of Brdt bromodomain 2 bound to an acetylated histone H3 peptide 分子名称: BROMODOMAIN TESTIS-SPECIFIC PROTEIN, HISTONE H3 著者 Moriniere, J, Rousseaux, S, Steuerwald, U, Soler-Lopez, M, Curtet, S, Vitte, A.-L, Govin, J, Gaucher, J, Sadoul, K, Hart, D.J, Krijgsveld, J, Khochbin, S, Mueller, C.W, Petosa, C. 登録日 2009-08-02 公開日 2009-09-22 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Cooperative Binding of Two Acetylation Marks on a Histone Tail by a Single Bromodomain. Nature, 461, 2009
7X6L	Cryo-EM structure of H3 hemagglutinin from A/HongKong/01/1968 in complex with a neutralizing antibody 28-12 分子名称: Heavy chain of antibody 12 fab, Hemagglutinin, The light chain of the antibody 12 fab 著者 Cong, Y, Liu, C.X. 登録日 2022-03-07 公開日 2022-03-23 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Unique binding pattern for a lineage of human antibodies with broad reactivity against influenza A virus. Nat Commun, 13, 2022
4JJN	Crystal structure of heterochromatin protein Sir3 in complex with a silenced yeast nucleosome 分子名称: DNA (146-MER), Histone H2A.2, Histone H2B.2, ... 著者 Wang, F, Li, G, Mohammed, A, Lu, C, Currie, M, Johnson, A, Moazed, D. 登録日 2013-03-08 公開日 2013-05-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.09 Å) 主引用文献 Heterochromatin protein Sir3 induces contacts between the amino terminus of histone H4 and nucleosomal DNA. Proc.Natl.Acad.Sci.USA, 110, 2013
6MUP	CENP-A nucleosome bound by two copies of CENP-C(CD) and two copies CENP-N(NT) 分子名称: Centromere protein C, Centromere protein N, DNA (147-MER), ... 著者 Allu, P.K, Black, B.E. 登録日 2018-10-23 公開日 2019-07-24 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure of the Human Core Centromeric Nucleosome Complex. Curr.Biol., 29, 2019
3B95	EuHMT1 (Glp) Ankyrin Repeat Domain (Structure 2) 分子名称: Euchromatic histone-lysine N-methyltransferase 1, Histone H3 N-terminal Peptide, SULFATE ION 著者 Collins, R.E, Horton, J.R, Cheng, X. 登録日 2007-11-02 公開日 2008-02-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.99 Å) 主引用文献 The ankyrin repeats of G9a and GLP histone methyltransferases are mono- and dimethyllysine binding modules. Nat.Struct.Mol.Biol., 15, 2008
6R1T	Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 1, free nuclesome 分子名称: DNA (147-MER), HISTONE H2A, Histone H2A, ... 著者 Marabelli, C, Pilotto, S, Chittori, S, Subramaniam, S, Mattevi, A. 登録日 2019-03-15 公開日 2019-04-24 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.02 Å) 主引用文献 A Tail-Based Mechanism Drives Nucleosome Demethylation by the LSD2/NPAC Multimeric Complex. Cell Rep, 27, 2019
6MUO	CENP-A nucleosome bound by two copies of CENP-C(CD) and one copy CENP-N(NT) 分子名称: Centromere protein C, Centromere protein N, DNA/RNA (147-MER), ... 著者 Allu, P.K, Black, B.E. 登録日 2018-10-23 公開日 2019-07-24 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of the Human Core Centromeric Nucleosome Complex. Curr.Biol., 29, 2019
7D20	Cryo-EM structure of SET8-CENP-A-nucleosome complex 分子名称: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... 著者 Ho, C.-H, Takizawa, Y, Kobayashi, W, Arimura, Y, Kurumizaka, H. 登録日 2020-09-15 公開日 2021-02-10 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of nucleosomal histone H4 lysine 20 methylation by SET8 methyltransferase. Life Sci Alliance, 4, 2021
6TEM	CENP-A nucleosome core particle with 145 base pairs of the Widom 601 sequence by cryo-EM 分子名称: Histone H2A, Histone H2B 1.1, Histone H3-like centromeric protein A, ... 著者 Boopathi, R, Danev, R, Petosa, C, Bednar, J. 登録日 2019-11-12 公開日 2020-04-08 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Phase-plate cryo-EM structure of the Widom 601 CENP-A nucleosome core particle reveals differential flexibility of the DNA ends. Nucleic Acids Res., 48, 2020
2OQ6	Crystal structure of JMJD2A complexed with histone H3 peptide trimethylated at Lys9 分子名称: JmjC domain-containing histone demethylation protein 3A, N-OXALYLGLYCINE, NICKEL (II) ION, ... 著者 Pilka, E.S, Ng, S.S, Kavanagh, K.L, McDonough, M.A, Savitsky, P, von Delft, F, Arrowsmith, C.H, Weigelt, J, Edwards, A, Sundstrom, M, Schofield, C.J, Oppermann, U, Structural Genomics Consortium (SGC) 登録日 2007-01-31 公開日 2007-03-13 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structures of histone demethylase JMJD2A reveal basis for substrate specificity. Nature, 448, 2007
2OS2	Crystal structure of JMJD2A complexed with histone H3 peptide trimethylated at Lys36 分子名称: JmjC domain-containing histone demethylation protein 3A, N-OXALYLGLYCINE, NICKEL (II) ION, ... 著者 Kavanagh, K.L, Ng, S.S, Pilka, E, McDonough, M.A, Savitsky, P, von Delft, F, Arrowsmith, C.H, Weigelt, J, Edwards, A, Sundstrom, M, Schofield, C.J, Oppermann, U, Structural Genomics Consortium (SGC) 登録日 2007-02-05 公開日 2007-03-13 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structures of histone demethylase JMJD2A reveal basis for substrate specificity. Nature, 448, 2007
2RI7	Crystal structure of PHD finger-linker-bromodomain Y17E mutant from human BPTF in the H3(1-9)K4ME2 bound state 分子名称: GLYCEROL, ISOPROPYL ALCOHOL, Nucleosome-remodeling factor subunit BPTF, ... 著者 Li, H, Patel, D.J. 登録日 2007-10-10 公開日 2007-12-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger. Mol.Cell, 28, 2007
3NQJ	Crystal structure of (CENP-A/H4)2 heterotetramer 分子名称: Histone H3-like centromeric protein A, Histone H4, PHOSPHATE ION 著者 Sekulic, N, Black, B.E. 登録日 2010-06-29 公開日 2010-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The structure of (CENP-A-H4)(2) reveals physical features that mark centromeres. Nature, 467, 2010
2OX0	Crystal structure of JMJD2A complexed with histone H3 peptide dimethylated at Lys9 分子名称: CHLORIDE ION, JmjC domain-containing histone demethylation protein 3A, N-OXALYLGLYCINE, ... 著者 Pilka, E.S, Ng, S.S, Kavanagh, K.L, McDonough, M.A, Savitsky, P, von Delft, F, Arrowsmith, C.H, Weigelt, J, Edwards, A, Sundstrom, M, Schofield, C.J, Oppermann, U, Structural Genomics Consortium (SGC) 登録日 2007-02-19 公開日 2007-03-13 最終更新日 2025-03-26 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structures of histone demethylase JMJD2A reveal basis for substrate specificity. Nature, 448, 2007
5JJO	The crystal structure of immunity protein PA5088 from Pseudomonas aeruginosa 分子名称: GOLD ION, Uncharacterized protein 著者 Li, Z.Q, Gao, Z.Q, She, Z, Dong, Y.H. 登録日 2016-04-24 公開日 2016-08-31 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (2.002 Å) 主引用文献 Structural analysis of Pseudomonas aeruginosa H3-T6SS immunity proteins Febs Lett., 590, 2016
3NQU	Crystal structure of partially trypsinized (CENP-A/H4)2 heterotetramer 分子名称: Histone H3-like centromeric protein A, Histone H4, SULFATE ION 著者 Sekulic, N, Black, B.E. 登録日 2010-06-29 公開日 2010-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The structure of (CENP-A-H4)(2) reveals physical features that mark centromeres. Nature, 467, 2010

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