PDB: 17012 件ウェブページステータス検索Chemie searchBIRD

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5O7N	Beta-lactamase VIM-2 in complex with (2R)-1-(2-Benzyl-3-mercaptopropanoyl)piperidine-2-carboxylic acid 分子名称: (2~{R})-1-[(2~{S})-2-(phenylmethyl)-3-sulfanyl-propanoyl]piperidine-2-carboxylic acid, 1,2-ETHANEDIOL, Beta-lactamase VIM-2, ... 著者 Buettner, D, Kramer, J.S, Pogoryelov, D, Proschak, E. 登録日 2017-06-09 公開日 2018-06-20 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Challenges in the Development of a Thiol-Based Broad-Spectrum Inhibitor for Metallo-beta-Lactamases. Acs Infect Dis., 4, 2018
2OEU	Full-length hammerhead ribozyme with Mn(II) bound 分子名称: 5'-R(*GP*GP*CP*GP*UP*(OMC)P*CP*UP*GP*GP*(5BU)P*AP*UP*CP*CP*AP*AP*UP*CP*(DC))-3', Hammerhead Ribozyme, MANGANESE (II) ION 著者 Martick, M, Scott, W.G. 登録日 2007-01-01 公開日 2007-02-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Solvent structure and hammerhead ribozyme catalysis. Chem.Biol., 15, 2008
1XZN	PYRR, THE REGULATOR OF THE PYRIMIDINE BIOSYNTHETIC OPERON IN BACILLUS CALDOLYTICUS, sulfate-bound form 分子名称: MAGNESIUM ION, PyrR bifunctional protein, SULFATE ION 著者 Chander, P, Halbig, K.M, Miller, J.K, Fields, C.J, Bonner, H.K, Grabner, G.K, Switzer, R.L, Smith, J.L. 登録日 2004-11-12 公開日 2005-03-01 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 Structure of the Nucleotide Complex of PyrR, the pyr Attenuation Protein from Bacillus caldolyticus, Suggests Dual Regulation by Pyrimidine and Purine Nucleotides. J.Bacteriol., 187, 2005
1XNC	THERMOSTABILIZATION OF THE BACILLUS CIRCULANS XYLANASE, BY THE INTRODUCTION OF DISULFIDE BONDS 分子名称: XYLANASE 著者 Campbell, R.L. 登録日 1994-06-01 公開日 1994-12-20 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Thermostabilization of the Bacillus circulans xylanase by the introduction of disulfide bonds. Protein Eng., 7, 1994
3MWS	Crystal Structure of Group N HIV-1 Protease 分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, HIV-1 Protease 著者 Sayer, J.M, Agniswamy, J, Weber, I.T, Louis, J.M. 登録日 2010-05-06 公開日 2011-03-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.09 Å) 主引用文献 Autocatalytic maturation, physical/chemical properties, and crystal structure of group N HIV-1 protease: relevance to drug resistance. Protein Sci., 19, 2010
2O3E	Crystal structure of engineered neurolysin with thimet oligopeptidase specificity for neurotensin cleavage site. 分子名称: Neurolysin, ZINC ION 著者 Rodgers, D.W, Lim, E.J. 登録日 2006-12-01 公開日 2007-01-23 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Swapping the substrate specificities of the neuropeptidases neurolysin and thimet oligopeptidase. J.Biol.Chem., 282, 2007
1XZ8	Pyrr, The Regulator Of The Pyrimidine Biosynthetic Operon In Bacillus caldolyticus, Nucleotide-bound form 分子名称: GUANOSINE-3'-MONOPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ... 著者 Chander, P, Halbig, K.M, Miller, J.K, Fields, C.J, Bonner, H.K, Grabner, G.K, Switzer, R.L, Smith, J.L. 登録日 2004-11-11 公開日 2005-03-01 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of the Nucleotide Complex of PyrR, the pyr Attenuation Protein from Bacillus caldolyticus, Suggests Dual Regulation by Pyrimidine and Purine Nucleotides. J.Bacteriol., 187, 2005
2OB2	ppm1 in the absence of 1,8-ANS (cf 1JD) 分子名称: GLYCEROL, Leucine carboxyl methyltransferase 1, PHOSPHATE ION, ... 著者 Groves, M.R, Mueller, I.B, Kreplin, X, Mueller-Dieckmann, J. 登録日 2006-12-18 公開日 2007-01-30 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 A method for the general identification of protein crystals in crystallization experiments using a noncovalent fluorescent dye. Acta Crystallogr.,Sect.D, 63, 2007
3N9R	Class II fructose-1,6-bisphosphate aldolase from helicobacter pylori in complex with N-(4-hydroxybutyl)-phosphoglycolohydroxamic acid, a competitive inhibitor 分子名称: 2-[hydroxy(4-hydroxybutyl)amino]-2-oxoethyl dihydrogen phosphate, CHLORIDE ION, Fructose-bisphosphate aldolase, ... 著者 Coincon, M, Sygusch, S. 登録日 2010-05-31 公開日 2010-11-17 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Rational Design, Synthesis, and Evaluation of New Selective Inhibitors of Microbial Class II (Zinc Dependent) Fructose Bis-phosphate Aldolases. J.Med.Chem., 53, 2010
2OK6	Crystal structure of aromatic amine dehydrogenase TTQ-formamide adduct oxidized with ferricyanide. 分子名称: Aromatic amine dehydrogenase, large subunit, small subunit, ... 著者 Roujeinikova, A, Leys, D. 登録日 2007-01-16 公開日 2007-04-24 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 New insights into the reductive half-reaction mechanism of aromatic amine dehydrogenase revealed by reaction with carbinolamine substrates. J.Biol.Chem., 282, 2007
2OB1	ppm1 with 1,8-ANS 分子名称: Leucine carboxyl methyltransferase 1, PHOSPHATE ION 著者 Groves, M.R. 登録日 2006-12-18 公開日 2007-01-30 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A method for the general identification of protein crystals in crystallization experiments using a noncovalent fluorescent dye. Acta Crystallogr.,Sect.D, 63, 2007
1ZPK	Crystal structure of the complex of mutant HIV-1 protease (A71V, V82T, I84V) with a hydroxyethylamine peptidomimetic inhibitor BOC-PHE-PSI[R-CH(OH)CH2NH]-PHE-GLU-PHE-NH2 分子名称: CHLORIDE ION, N-{(2R,3S)-3-[(tert-butoxycarbonyl)amino]-2-hydroxy-4-phenylbutyl}-L-phenylalanyl-L-alpha-glutamyl-L-phenylalaninamide, PROTEASE RETROPEPSIN, ... 著者 Duskova, J, Skalova, T, Dohnalek, J, Petrokova, H, Hasek, J. 登録日 2005-05-17 公開日 2006-04-25 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Mutational Study of Pseudopeptide Inhibitor Binding to HIV-1 Protease; Analysis of Four X-ray Structures To be Published
1ZAQ	FOURTH EGF-LIKE DOMAIN OF THROMBOMODULIN, NMR, 12 STRUCTURES 分子名称: THROMBOMODULIN 著者 Meininger, D.P, Komives, E.A. 登録日 1995-09-09 公開日 1996-01-29 最終更新日 2022-03-02 実験手法 SOLUTION NMR 主引用文献 Synthesis, Activity, and Preliminary Structure of the Fourth Egf-Like Domain of Thrombomodulin Protein Sci., 4, 1995
3OG9	Structure of YahD with Malic acid 分子名称: D-MALATE, protein yahD a copper inducible hydrolase 著者 Martinez Font, J, Mancini, S, Tauberger, E, Moniot, S. 登録日 2010-08-16 公開日 2010-12-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Regulation and structure of YahD, a copper inducible alpha/beta hydrolase of Lactococcus lactis IL1403 Fems Microbiol.Lett., 314, 2011
2OIZ	Crystal Structure of the Tryptamine-Derived (Indol-3-Acetamide)-TTQ Adduct of Aromatic Amine Dehydrogenase 分子名称: 2-(1H-INDOL-3-YL)ACETAMIDE, Aromatic amine dehydrogenase, large subunit, ... 著者 Roujeinikova, A, Leys, D. 登録日 2007-01-12 公開日 2007-04-24 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 New insights into the reductive half-reaction mechanism of aromatic amine dehydrogenase revealed by reaction with carbinolamine substrates. J.Biol.Chem., 282, 2007
2PUG	CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES 分子名称: DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T )-3'), HYPOXANTHINE, PROTEIN (PURINE REPRESSOR) 著者 Lu, F, Schumacher, M.A, Arvidson, D.N, Haldimann, A, Wanner, B.L, Zalkin, H, Brennan, R.G. 登録日 1997-10-04 公開日 1998-05-06 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure-based redesign of corepressor specificity of the Escherichia coli purine repressor by substitution of residue 190. Biochemistry, 37, 1998
1Y3G	Crystal Structure of a Silanediol Protease Inhibitor Bound to Thermolysin 分子名称: (2S)-2-{[(AMINOMETHYL)(DIHYDROXY)SILYL]METHYL}-4-METHYLPENTANAL, 3-PHENYLPROPANAL, CALCIUM ION, ... 著者 Juers, D.H, Kim, J, Matthews, B.W, Sieburth, S.M. 登録日 2004-11-24 公開日 2006-01-17 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural Analysis of Silanediols as Transition-State-Analogue Inhibitors of the Benchmark Metalloprotease Thermolysin(,). Biochemistry, 44, 2005
3OOH	Crystal structure of E. Coli purine nucleoside phosphorylase with PO4 分子名称: PHOSPHATE ION, Purine nucleoside phosphorylase deoD-type 著者 Mikleusevic, G, Stefanic, Z, Narzyk, M, Wielgus-Kutrowska, B, Bzowska, A, Luic, M. 登録日 2010-08-31 公開日 2011-07-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Validation of the catalytic mechanism of Escherichia coli purine nucleoside phosphorylase by structural and kinetic studies. Biochimie, 93, 2011
2PFW	CRYSTAL STRUCTURE OF A RMLC-LIKE CUPIN (SFRI_3105) FROM SHEWANELLA FRIGIDIMARINA NCIMB 400 AT 1.90 A RESOLUTION 分子名称: 1,2-ETHANEDIOL, Cupin 2, conserved barrel domain protein 著者 Joint Center for Structural Genomics (JCSG) 登録日 2007-04-05 公開日 2007-04-17 最終更新日 2023-01-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of Cupin 2 conserved barrel domain protein (YP_751781.1) from Shewanella frigidimarina NCIMB 400 at 1.90 A resolution To be published
1Y58	The structure of a lactoferricinB derivative bound to micelles 分子名称: Lactotransferrin 著者 Nguyen, L.T, Schibli, D.J, Vogel, H.J. 登録日 2004-12-02 公開日 2005-03-22 最終更新日 2022-03-02 実験手法 SOLUTION NMR 主引用文献 Structural studies and model membrane interactions of two peptides derived from bovine lactoferricin J.Pept.Sci., 11, 2005
1ZLF	Crystal structure of a complex of mutant HIV-1 protease (A71V, V82T, I84V) with a hydroxyethylamine peptidomimetic inhibitor 分子名称: N-{(2R,3S)-3-[(tert-butoxycarbonyl)amino]-2-hydroxy-4-phenylbutyl}-L-phenylalanyl-L-glutaminyl-L-phenylalaninamide, PROTEASE RETROPEPSIN 著者 Skalova, T, Dohnalek, J, Duskova, J, Petrokova, H, Hasek, J. 登録日 2005-05-06 公開日 2006-04-25 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 HIV-1 protease mutations and inhibitor modifications monitored on a series of complexes. Structural basis for the effect of the A71V mutation on the active site J.Med.Chem., 49, 2006
3Q48	Crystal structure of Pseudomonas aeruginosa CupB2 chaperone 分子名称: Chaperone CupB2 著者 Cai, X, Wang, R, Filloux, A, Waksman, G, Meng, G. 登録日 2010-12-23 公開日 2011-02-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural and functional characterization of Pseudomonas aeruginosa CupB chaperones Plos One, 6, 2011
2OMA	Crystallographic analysis of a chemically modified triosephosphate isomerase from Trypanosoma cruzi with dithiobenzylamine (DTBA) 分子名称: DI(HYDROXYETHYL)ETHER, SULFATE ION, TRIETHYLENE GLYCOL, ... 著者 Rodriguez-Romero, A, Gomez-Puyou, A. 登録日 2007-01-21 公開日 2007-11-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Perturbation of the Dimer Interface of Triosephosphate Isomerase and its Effect on Trypanosoma cruzi. PLoS Negl Trop Dis, 1, 2007
1ZJD	Crystal Structure of the Catalytic Domain of Coagulation Factor XI in Complex with Kunitz Protease Inhibitor Domain of Protease Nexin II 分子名称: Catalytic Domain of Coagulation Factor XI, Kunitz Protease Inhibitory Domain of Protease Nexin II 著者 Jin, L, Navaneetham, D, Pandey, P, Strickler, J.E, Babine, R.E, Walsh, P.N, Abdel-Meguid, S.S. 登録日 2005-04-28 公開日 2005-08-09 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural and Mutational Analyses of the Molecular Interactions between the Catalytic Domain of Factor XIa and the Kunitz Protease Inhibitor Domain of Protease Nexin 2 J.Biol.Chem., 280, 2005
5O1Q	LysF1 sh3b domain structure 分子名称: sh3b domain 著者 Benesik, M, Novacek, J, Janda, L, Dopitova, R, Pernisova, M, Melkova, K, Tisakova, L, Doskar, J, Zidek, L, Hejatko, J, Pantucek, R. 登録日 2017-05-19 公開日 2017-09-20 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Role of SH3b binding domain in a natural deletion mutant of Kayvirus endolysin LysF1 with a broad range of lytic activity. Virus Genes, 54, 2018

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