5O1Q
 
 | | LysF1 sh3b domain structure | | Descriptor: | sh3b domain | | Authors: | Benesik, M, Novacek, J, Janda, L, Dopitova, R, Pernisova, M, Melkova, K, Tisakova, L, Doskar, J, Zidek, L, Hejatko, J, Pantucek, R. | | Deposit date: | 2017-05-19 | | Release date: | 2017-09-20 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Role of SH3b binding domain in a natural deletion mutant of Kayvirus endolysin LysF1 with a broad range of lytic activity.
Virus Genes, 54, 2018
|
|
5LI4
 | | bacteriophage phi812K1-420 tail sheath protein after contraction | | Descriptor: | tail sheath protein | | Authors: | Novacek, J, Siborova, M, Benesik, M, Pantucek, R, Doskar, J, Plevka, P. | | Deposit date: | 2016-07-14 | | Release date: | 2017-07-19 | | Last modified: | 2020-09-16 | | Method: | ELECTRON MICROSCOPY (4.2 Å) | | Cite: | Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
|
|
5LI2
 | | bacteriophage phi812K1-420 tail sheath and tail tube protein in native tail | | Descriptor: | Phage-like element PBSX protein XkdM, tail sheath protein | | Authors: | Novacek, J, Siborova, M, Benesik, M, Pantucek, R, Doskar, J, Plevka, P. | | Deposit date: | 2016-07-14 | | Release date: | 2017-07-19 | | Last modified: | 2020-09-16 | | Method: | ELECTRON MICROSCOPY (6.2 Å) | | Cite: | Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
|
|
5LIJ
 | | polyalanine chain built in bacteriophage phi812K1-420 cement protein density map | | Descriptor: | polyalanine chain built in bacteriophage phi812K1-420 cement protein density map | | Authors: | Novacek, J, Siborova, M, Benesik, M, Pantucek, R, Doskar, J, Plevka, P. | | Deposit date: | 2016-07-14 | | Release date: | 2017-07-26 | | Last modified: | 2019-12-11 | | Method: | ELECTRON MICROSCOPY (4.2 Å) | | Cite: | Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
|
|
5LII
 | | bacteriophage phi812K1-420 major capsid protein | | Descriptor: | Major capsid protein | | Authors: | Novacek, J, Siborova, M, Benesik, M, Pantucek, R, Doskar, J, Plevka, P. | | Deposit date: | 2016-07-14 | | Release date: | 2017-07-19 | | Last modified: | 2019-12-11 | | Method: | ELECTRON MICROSCOPY (3.8 Å) | | Cite: | Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
|
|
6TEH
 | | Baseplate of native GTA particle computed with C3 symmetry | | Descriptor: | IRON/SULFUR CLUSTER, Putative gene transfer agent protein | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-11-12 | | Release date: | 2020-07-22 | | Method: | ELECTRON MICROSCOPY (3.99 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
6TO8
 | | Neck of empty GTA particle computed with C12 symmetry | | Descriptor: | Adaptor protein Rcc01688, Portal protein Rcc01684 | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-12-11 | | Release date: | 2020-07-22 | | Method: | ELECTRON MICROSCOPY (3.36 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
6TEA
 | | Tail of native GTA particle computed with helical refinement, C6 symmetry | | Descriptor: | Phage major tail protein, TP901-1 family | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-11-11 | | Release date: | 2020-07-22 | | Method: | ELECTRON MICROSCOPY (3.89 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
6TB9
 | | Capsid of native GTA particle computed with C5 symmetry | | Descriptor: | Head spike base Rcc01079, Head spike fiber Rcc01080, Major capsid protein Rcc01687 | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-11-01 | | Release date: | 2020-07-22 | | Last modified: | 2022-02-16 | | Method: | ELECTRON MICROSCOPY (3.56 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
6TSU
 | | Capsid of empty GTA particle computed with C5 symmetry | | Descriptor: | Major capsid protein Rcc01687, Uncharacterized protein | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-12-21 | | Release date: | 2020-07-22 | | Last modified: | 2022-02-16 | | Method: | ELECTRON MICROSCOPY (3.42 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
6TUI
 | | Virion of empty GTA particle | | Descriptor: | Adaptor protein Rcc01688, Phage major capsid protein, HK97 family, ... | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2020-01-07 | | Release date: | 2020-10-14 | | Method: | ELECTRON MICROSCOPY (10.47 Å) | | Cite: | Virion of empty GTA particle
Nat Commun, 11, 2020
|
|
6TE8
 | | Neck of native GTA particle computed with C12 symmetry | | Descriptor: | Adaptor protein Rcc01688, Phage portal protein, HK97 family | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-11-11 | | Release date: | 2020-07-22 | | Method: | ELECTRON MICROSCOPY (3.32 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
6TEB
 | | Tail-baseplate interface of native GTA particle computed with C6 symmetry | | Descriptor: | Distal tail protein Rcc01695, Tail tube protein Rcc01691 | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-11-11 | | Release date: | 2020-07-22 | | Method: | ELECTRON MICROSCOPY (4.14 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
6TOA
 | | Neck of empty GTA particle computed with C6 symmetry | | Descriptor: | Adaptor protein Rcc01688, Portal protein Rcc01684, Stopper protein Rcc01689, ... | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-12-11 | | Release date: | 2020-07-22 | | Method: | ELECTRON MICROSCOPY (3.47 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
6TE9
 | | Neck of native GTA particle computed with C6 symmetry | | Descriptor: | Adaptor protein Rcc01688, Phage major tail protein, TP901-1 family, ... | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-11-11 | | Release date: | 2020-07-22 | | Method: | ELECTRON MICROSCOPY (3.58 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
6TSV
 | | Tail of empty GTA particle computed with helical refinement, C6 symmetry | | Descriptor: | Tail tube protein Rcc01691 | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-12-21 | | Release date: | 2020-07-22 | | Method: | ELECTRON MICROSCOPY (3.78 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
6TSW
 | | Isometric capsid of empty GTA particle computed with I4(I,n25r) symmetry | | Descriptor: | Major capsid protein Rcc01687 | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-12-21 | | Release date: | 2020-07-22 | | Method: | ELECTRON MICROSCOPY (4.03 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
6TBA
 | | Virion of native gene transfer agent (GTA) particle | | Descriptor: | IRON/SULFUR CLUSTER, Phage major capsid protein, HK97 family, ... | | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | | Deposit date: | 2019-11-01 | | Release date: | 2020-07-22 | | Last modified: | 2021-07-14 | | Method: | ELECTRON MICROSCOPY (4.54 Å) | | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
|
|
