Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6FDU
DownloadVisualize
BU of 6fdu by Molmil
Structure of Chlamydia trachomatis effector protein Cdu1 bound to Compound 3
分子名称: (2~{S},3~{S})-2-[[(2~{S})-2-[3,5-bis(chloranyl)phenyl]-2-(dimethylamino)ethanoyl]amino]-~{N}-[[2-(iminomethyl)pyrimidin-4-yl]methyl]-3-methyl-pentanamide, CHLORIDE ION, Deubiquitinase and deneddylase Dub1
著者Ramirez, Y, Kisker, C, Altmann, E.
登録日2017-12-26
公開日2018-08-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of Substrate Recognition and Covalent Inhibition of Cdu1 from Chlamydia trachomatis.
ChemMedChem, 13, 2018
6FDQ
DownloadVisualize
BU of 6fdq by Molmil
Structure of Chlamydia trachomatis effector protein Cdu1 bound to Compound 5
分子名称: Deubiquitinase and deneddylase Dub1, N-benzyl-2-[(Z)-iminomethyl]pyrimidine-5-carboxamide
著者Ramirez, Y, Kisker, C, Altmann, E.
登録日2017-12-26
公開日2018-08-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of Substrate Recognition and Covalent Inhibition of Cdu1 from Chlamydia trachomatis.
ChemMedChem, 13, 2018
4RIS
DownloadVisualize
BU of 4ris by Molmil
Structural Analysis of the Unmutated Ancestor of the HIV-1 Envelope V2 Region Antibody CH58 Isolated From an RV144 HIV-1 Vaccine Efficacy Trial Vaccinee and Associated with Decreased Transmission Risk
分子名称: CH58-UA Fab heavy chain, CH58-UA Fab light chain, Envelope glycoprotein
著者Nicely, N.I, Wiehe, K, Kepler, T.B, Jaeger, F.H, Dennison, S.M, Liao, H.-X, Alam, S.M, Hwang, K.-K, Bonsignori, M, Rerks-Ngarm, S, Nitayaphan, S, Pitisuttithum, P, Kaewkungwal, J, Robb, M.L, O'Connell, R.J, Michael, N.L, Kim, J.H, Haynes, B.F.
登録日2014-10-07
公開日2015-08-12
最終更新日2015-09-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural analysis of the unmutated ancestor of the HIV-1 envelope V2 region antibody CH58 isolated from an RV144 vaccine efficacy trial vaccinee.
EBioMedicine, 2, 2015
4RIR
DownloadVisualize
BU of 4rir by Molmil
Structural Analysis of the Unmutated Ancestor of the HIV-1 Envelope V2 Region Antibody CH58 Isolated From an RV144 HIV-1 Vaccine Efficacy Trial Vaccinee and Associated with Decreased Transmission Risk
分子名称: CH58-UA Fab heavy chain, CH58-UA Fab light chain
著者Nicely, N.I, Wiehe, K, Kepler, T.B, Jaeger, F.H, Dennison, S.M, Liao, H.-X, Alam, S.M, Hwang, K.-K, Bonsignori, M, Rerks-Ngarm, S, Nitayaphan, S, Pitisuttithum, P, Kaewkungwal, J, Robb, M.L, O'Connell, R.J, Michael, N.L, Kim, J.H, Haynes, B.F.
登録日2014-10-07
公開日2015-08-12
最終更新日2015-09-02
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural analysis of the unmutated ancestor of the HIV-1 envelope V2 region antibody CH58 isolated from an RV144 vaccine efficacy trial vaccinee.
EBioMedicine, 2, 2015
7E4U
DownloadVisualize
BU of 7e4u by Molmil
Crystal structure of Peroxiredoxin-1
分子名称: CALCIUM ION, GLYCEROL, Peroxiredoxin 1
著者Ahmed, S, Mok, Y.K, Jobichen, C.
登録日2021-02-15
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Peroxiredoxin-1
To Be Published
4NEW
DownloadVisualize
BU of 4new by Molmil
Crystal structure of Trypanothione Reductase from Trypanosoma cruzi in complex with inhibitor EP127 (5-{5-[1-(PYRROLIDIN-1-YL)CYCLOHEXYL]-1,3-THIAZOL-2-YL}-1H-INDOLE)
分子名称: 5-{5-[1-(pyrrolidin-1-yl)cyclohexyl]-1,3-thiazol-2-yl}-1H-indole, FLAVIN-ADENINE DINUCLEOTIDE, Trypanothione reductase, ...
著者Persch, E, Bryson, S, Pai, E.F, Krauth-Siegel, R.L, Diederich, F.
登録日2013-10-30
公開日2014-05-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Binding to large enzyme pockets: small-molecule inhibitors of trypanothione reductase.
Chemmedchem, 9, 2014
4NEV
DownloadVisualize
BU of 4nev by Molmil
Crystal structure of Trypanothione Reductase from Trypanosoma brucei in complex with inhibitor EP127 (5-{5-[1-(PYRROLIDIN-1-YL)CYCLOHEXYL]-1,3-THIAZOL-2-YL}-1H-INDOLE)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-{5-[1-(pyrrolidin-1-yl)cyclohexyl]-1,3-thiazol-2-yl}-1H-indole, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Persch, E, Bryson, S, Pai, E.F, Krauth-Siegel, R.L, Diederich, F.
登録日2013-10-30
公開日2014-05-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Binding to large enzyme pockets: small-molecule inhibitors of trypanothione reductase.
Chemmedchem, 9, 2014
2UYL
DownloadVisualize
BU of 2uyl by Molmil
Crystal structure of a monoclonal antibody directed against an antigenic determinant common to Ogawa and Inaba serotypes of Vibrio cholerae O1
分子名称: MONOCLONAL ANTIBODY F-22-30
著者Ahmed, F, Haouz, A, Nato, F, Fournier, J.M, Alzari, P.M.
登録日2007-04-10
公開日2008-05-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of a Monoclonal Antibody Directed Against an Antigenic Determinant Common to Ogawa and Inaba Serotypes of Vibrio Cholerae O1.
Proteins, 70, 2008
2V2V
DownloadVisualize
BU of 2v2v by Molmil
IspE in complex with ligand
分子名称: 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE, 5'-[(1H-BENZIMIDAZOL-2-YLACETYL)AMINO]-5'-DEOXYCYTIDINE, BROMIDE ION, ...
著者Alphey, M.S, Hunter, W.N.
登録日2007-06-07
公開日2007-06-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Synthesis and Characterization of Cytidine Derivatives that Inhibit the Kinase Ispe of the Non-Mevalonate Pathway for Isoprenoid Biosynthesis.
Chemmedchem, 3, 2008
2V2Q
DownloadVisualize
BU of 2v2q by Molmil
IspE in complex with ligand
分子名称: 4-AMINO-1-(5-{[3-(1H-BENZIMIDAZOL-2-YL)PROPANOYL]AMINO}-5-DEOXY-ALPHA-L-LYXOFURANOSYL)PYRIMIDIN-2(1H)-ONE, 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE, BROMIDE ION, ...
著者Alphey, M.S, Hunter, W.N.
登録日2007-06-06
公開日2007-06-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Synthesis and Characterization of Cytidine Derivatives that Inhibit the Kinase Ispe of the Non-Mevalonate Pathway for Isoprenoid Biosynthesis.
Chemmedchem, 3, 2008
2GGF
DownloadVisualize
BU of 2ggf by Molmil
Solution structure of the MA3 domain of human Programmed cell death 4
分子名称: Programmed cell death 4, isoform 1
著者Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-24
公開日2007-04-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the MA3 domain of human Programmed cell death 4
To be Published
2JWQ
DownloadVisualize
BU of 2jwq by Molmil
G-quadruplex recognition by quinacridines: a SAR, NMR and Biological study
分子名称: DNA (5'-D(*DTP*DTP*DAP*DGP*DGP*DGP*DT)-3'), N,N'-(dibenzo[b,j][1,7]phenanthroline-2,10-diyldimethanediyl)dipropan-1-amine
著者Hounsou, C, Guittat, L, Monchaud, D, Jourdan, M, Saettel, N, Mergny, J.L, Teulade-Fichou, M.
登録日2007-10-23
公開日2008-03-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献G-Quadruplex Recognition by Quinacridines: a SAR, NMR, and Biological Study
ChemMedChem, 2, 2007
3GCM
DownloadVisualize
BU of 3gcm by Molmil
Crystal Structure of E. coli polynucleotide phosphorylase bound to RNA and RNase E
分子名称: CITRATE ANION, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
著者Nurmohamed, S, Luisi, B.L.
登録日2009-02-22
公開日2009-06-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of Escherichia coli polynucleotide phosphorylase core bound to RNase E, RNA and manganese: implications for catalytic mechanism and RNA degradosome assembly.
J.Mol.Biol., 389, 2009
2NUH
DownloadVisualize
BU of 2nuh by Molmil
Crystal structure of CutA from the phytopathgen bacterium Xylella fastidiosa
分子名称: IMIDAZOLE, Periplasmic divalent cation tolerance protein
著者Medrano, F.J, Benedetti, C.E.
登録日2006-11-09
公開日2007-01-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Crystal structure of CutA from the phytopathgen bacterium Xylella fastidiosa
To be published
4INB
DownloadVisualize
BU of 4inb by Molmil
Crystal Structure of the N-Terminal Domain of HIV-1 Capsid in Complex With benzodiazepine Inhibitor
分子名称: (3Z)-3-{[(2-methoxyethyl)amino]methylidene}-1-methyl-5-phenyl-7-(trifluoromethyl)-1H-1,5-benzodiazepine-2,4(3H,5H)-dione, Gag protein, SODIUM ION
著者Coulombe, R.
登録日2013-01-04
公開日2013-02-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Monitoring Binding of HIV-1 Capsid Assembly Inhibitors Using (19) F Ligand-and (15) N Protein-Based NMR and X-ray Crystallography: Early Hit Validation of a Benzodiazepine Series.
Chemmedchem, 8, 2013
3GKQ
DownloadVisualize
BU of 3gkq by Molmil
Terminal oxygenase of carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1
分子名称: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Terminal oxygenase component of carbazole 1,9a-dioxygenase
著者Umeda, T, Nojiri, H.
登録日2009-03-11
公開日2010-03-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Specific interaction via putidaredoxin-type ferredoxin in carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1
To be Published
2HRC
DownloadVisualize
BU of 2hrc by Molmil
1.7 angstrom structure of human ferrochelatase variant R115L
分子名称: CHLORIDE ION, CHOLIC ACID, FE2/S2 (INORGANIC) CLUSTER, ...
著者Medlock, A, Swartz, L, Dailey, T.A, Dailey, H.A, Lanzilotta, W.N.
登録日2006-07-20
公開日2007-03-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Substrate interactions with human ferrochelatase
Proc.Natl.Acad.Sci.Usa, 104, 2007
3HCO
DownloadVisualize
BU of 3hco by Molmil
Human ferrochelatase with Cd and protoporphyrin IX bound
分子名称: BICARBONATE ION, CHOLIC ACID, FE2/S2 (INORGANIC) CLUSTER, ...
著者Medlock, A.E, Dailey, H.A, Lanzilotta, W.N.
登録日2009-05-06
公開日2009-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Product release rather than chelation determines metal specificity for ferrochelatase.
J.Mol.Biol., 393, 2009
3GME
DownloadVisualize
BU of 3gme by Molmil
Crystal Structure of Polynucleotide Phosphorylase in complex with RNase E and manganese
分子名称: MANGANESE (II) ION, Polyribonucleotide nucleotidyltransferase, Ribonuclease E
著者Nurmohamed, S, Luisi, B.L.
登録日2009-03-13
公開日2009-06-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of Escherichia coli polynucleotide phosphorylase core bound to RNase E, RNA and manganese: implications for catalytic mechanism and RNA degradosome assembly.
J.Mol.Biol., 389, 2009
3GLL
DownloadVisualize
BU of 3gll by Molmil
Crystal structure of Polynucleotide Phosphorylase (PNPase) core
分子名称: Polyribonucleotide nucleotidyltransferase
著者Nurmohamed, S, Luisi, B.L.
登録日2009-03-12
公開日2009-06-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Escherichia coli polynucleotide phosphorylase core bound to RNase E, RNA and manganese: implications for catalytic mechanism and RNA degradosome assembly.
J.Mol.Biol., 389, 2009
3HCR
DownloadVisualize
BU of 3hcr by Molmil
Human Ferrochelatase with deuteroporphyrin and Ni Bound
分子名称: CHLORIDE ION, CHOLIC ACID, FE(III) DEUTEROPORPHYRIN IX, ...
著者Medlock, A.E, Dailey, H.A, Lanzilotta, W.N.
登録日2009-05-06
公開日2009-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Product release rather than chelation determines metal specificity for ferrochelatase.
J.Mol.Biol., 393, 2009
3HCN
DownloadVisualize
BU of 3hcn by Molmil
Hg and protoporphyrin bound Human Ferrochelatase
分子名称: BICARBONATE ION, CHOLIC ACID, FE2/S2 (INORGANIC) CLUSTER, ...
著者Medlock, A.E, Dailey, H.A, Lanzilotta, W.N.
登録日2009-05-06
公開日2009-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Product release rather than chelation determines metal specificity for ferrochelatase.
J.Mol.Biol., 393, 2009
3HCP
DownloadVisualize
BU of 3hcp by Molmil
Human ferrochelatase with Mn and deuteroporphyrin bound
分子名称: CHOLIC ACID, FE(III) DEUTEROPORPHYRIN IX, FE2/S2 (INORGANIC) CLUSTER, ...
著者Medlock, A.E, Dailey, H.A, Lanzilotta, W.N.
登録日2009-05-06
公開日2009-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Product release rather than chelation determines metal specificity for ferrochelatase.
J.Mol.Biol., 393, 2009
7MBO
DownloadVisualize
BU of 7mbo by Molmil
FACTOR XIA (PICHIA PASTORIS; C500S [C122S]) IN COMPLEX WITH THE INHIBITOR Milvexian (BMS-986177), IUPAC NAME:(6R,10S)-10-{4-[5-chloro-2-(4-chloro-1H-1,2,3-triazol-1-yl)phenyl]-6- oxopyrimidin-1(6H)-yl}-1-(difluoromethyl)-6-methyl-1,4,7,8,9,10-hexahydro-15,11- (metheno)pyrazolo[4,3-b][1,7]diazacyclotetradecin-5(6H)-one
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Coagulation factor XIa light chain, Milvexian
著者Sheriff, S.
登録日2021-04-01
公開日2021-09-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (0.924 Å)
主引用文献Discovery of Milvexian, a High-Affinity, Orally Bioavailable Inhibitor of Factor XIa in Clinical Studies for Antithrombotic Therapy.
J.Med.Chem., 65, 2022
4U4S
DownloadVisualize
BU of 4u4s by Molmil
Crystal structure of the GluA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and BPAM25 at 1.90 A resolution.
分子名称: 4-ethyl-3,4-dihydro-2H-pyrido[4,3-e][1,2,4]thiadiazine 1,1-dioxide, ACETATE ION, CHLORIDE ION, ...
著者Noerholm, A.B, Deva, T, Frydenvang, K, Kastrup, J.S.
登録日2014-07-24
公開日2014-11-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Positive Allosteric Modulators of 2-Amino-3-(3-hydroxy-5-methylisoxazol-4-yl)propionic Acid Receptors Belonging to 4-Cyclopropyl-3,4-dihydro-2H-1,2,4-pyridothiadiazine Dioxides and Diversely Chloro-Substituted 4-Cyclopropyl-3,4-dihydro-2H-1,2,4-benzothiadiazine 1,1-Dioxides.
J.Med.Chem., 57, 2014

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon