Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8R8Q
DownloadVisualize
BU of 8r8q by Molmil
Lysosomal peptide transporter
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosylated lysosomal membrane protein, Major facilitator superfamily domain-containing protein 1
著者Jungnickel, K.E.J, Loew, C.
登録日2023-11-29
公開日2024-05-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4.08 Å)
主引用文献MFSD1 with its accessory subunit GLMP functions as a general dipeptide uniporter in lysosomes.
Nat.Cell Biol., 2024
6Z11
DownloadVisualize
BU of 6z11 by Molmil
Structure of Mycobacterium smegmatis HelD protein in complex with RNA polymerase core - State III, primary channel dis-engaged and active site interfering
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Kouba, T, Koval, T, Krasny, L, Dohnalek, J.
登録日2020-05-11
公開日2020-11-04
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献HelD, a helicase-like protein from gram-positive bacteria in complex with RNA polymerase
To Be Published
6ZEE
DownloadVisualize
BU of 6zee by Molmil
Structure of PP1(7-300) bound to Phactr1 (507-580) at pH8.4
分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE, GLYCEROL, ...
著者Mouilleron, S, Treisman, R, Fedoryshchak, R, Lee, R, Butler, A.M, Prechova, M.
登録日2020-06-16
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular basis for substrate specificity of the Phactr1/PP1 phosphatase holoenzyme.
Elife, 9, 2020
6Z2W
DownloadVisualize
BU of 6z2w by Molmil
Mec1-Ddc2 (F2244L mutant) in complex with Mg AMP-PNP
分子名称: DNA damage checkpoint protein LCD1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Yates, L.A, Zhang, X.
登録日2020-05-18
公開日2020-11-11
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Mechanism of auto-inhibition and activation of Mec1 ATR checkpoint kinase.
Nat.Struct.Mol.Biol., 28, 2021
7QUO
DownloadVisualize
BU of 7quo by Molmil
FimH lectin domain in complex with oligomannose-6
分子名称: FimH, NICKEL (II) ION, SULFATE ION, ...
著者Bouckaert, J, Bourenkov, G.P.
登録日2022-01-18
公開日2023-02-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors
J.Biol.Chem., 299, 2023
6Z5O
DownloadVisualize
BU of 6z5o by Molmil
CRYSTAL STRUCTURE OF RAT PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE-1 (RPMFE1) COMPLEXED WITH COENZYME-A AND OXIDISED NICOTINAMIDE ADENINE DINUCLEOTIDE
分子名称: COENZYME A, GLYCEROL, NICOTINAMIDE, ...
著者Wierenga, R.K, Sridhar, S, Kiema, T.R.
登録日2020-05-27
公開日2020-12-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic binding studies of rat peroxisomal multifunctional enzyme type 1 with 3-ketodecanoyl-CoA: capturing active and inactive states of its hydratase and dehydrogenase catalytic sites.
Acta Crystallogr D Struct Biol, 76, 2020
6Z7F
DownloadVisualize
BU of 6z7f by Molmil
C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH N-(2-(1H-imidazol-4-yl)ethyl)-4-acetamido-3-(benzyloxy)benzamide
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, DI(HYDROXYETHYL)ETHER, ...
著者Chung, C.
登録日2020-05-30
公開日2020-07-29
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.605 Å)
主引用文献Design and Synthesis of a Highly Selective andIn Vivo-Capable Inhibitor of the Second Bromodomain of the Bromodomain and Extra Terminal Domain Family of Proteins.
J.Med.Chem., 63, 2020
6Z7L
DownloadVisualize
BU of 6z7l by Molmil
N-TERMINAL BROMODOMAIN OF HUMAN BRD4 with GSK789
分子名称: (3~{R},4~{R})-~{N}-cyclohexyl-4-[[5-(furan-2-yl)-3-methyl-2-oxidanylidene-1~{H}-1,7-naphthyridin-8-yl]amino]-1-methyl-piperidine-3-carboxamide, Bromodomain-containing protein 4
著者Chung, C.
登録日2020-05-31
公開日2020-07-29
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.624 Å)
主引用文献GSK789: A Selective Inhibitor of the First Bromodomains (BD1) of the Bromo and Extra Terminal Domain (BET) Proteins.
J.Med.Chem., 63, 2020
6Z7T
DownloadVisualize
BU of 6z7t by Molmil
Nucleotide-free Myosin-II motor domain
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Ewert, W, Preller, M.
登録日2020-06-01
公開日2020-10-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural and Computational Insights into a Blebbistatin-Bound Myosin•ADP Complex with Characteristics of an ADP-Release Conformation along the Two-Step Myosin Power Stoke.
Int J Mol Sci, 21, 2020
6Z85
DownloadVisualize
BU of 6z85 by Molmil
inhibitory human GTP cyclohydrolase I - GFRP complex
分子名称: 7,8-DIHYDROBIOPTERIN, GTP cyclohydrolase 1, GTP cyclohydrolase 1 feedback regulatory protein, ...
著者Ebenhoch, R, Nar, H, Vonck, J.
登録日2020-06-02
公開日2020-12-09
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献A hybrid approach reveals the allosteric regulation of GTP cyclohydrolase I.
Proc.Natl.Acad.Sci.USA, 117, 2020
6Z3L
DownloadVisualize
BU of 6z3l by Molmil
Repulsive Guidance Molecule C (RGMC, Hemojuvelin, HJV, HFE2) in complex with Growth Differentiation Factor 5 (GDF5)
分子名称: Growth/differentiation factor 5, Hemojuvelin
著者Malinauskas, T, Peer, T.V, Bishop, B, Muller, T.D, Siebold, C.
登録日2020-05-20
公開日2020-07-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.513 Å)
主引用文献Repulsive guidance molecules lock growth differentiation factor 5 in an inhibitory complex.
Proc.Natl.Acad.Sci.USA, 117, 2020
6Z0D
DownloadVisualize
BU of 6z0d by Molmil
tRNA-Guanine Transglycosylase (TGT) H333F mutant crystallised at pH 5.5
分子名称: GLYCEROL, Queuine tRNA-ribosyltransferase, ZINC ION
著者Nguyen, A, Heine, A, Klebe, G.
登録日2020-05-08
公開日2020-05-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Mutation study on tRNA-guanine transglycosylase for catalysis testing
To Be Published
6Z5K
DownloadVisualize
BU of 6z5k by Molmil
PqsR (MvfR) in complex with antagonist 18
分子名称: 6-chloranyl-3-[(2-pentyl-2,3-dihydro-1,3-thiazol-4-yl)methyl]quinazolin-4-one, Transcriptional regulator MvfR
著者Richardson, W.K, Emsley, J.
登録日2020-05-26
公開日2020-09-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献Novel quinazolinone inhibitors of the Pseudomonas aeruginosa quorum sensing transcriptional regulator PqsR.
Eur.J.Med.Chem., 208, 2020
6Z1J
DownloadVisualize
BU of 6z1j by Molmil
Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV LSP co-crystallization with spheroidene
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2R)-2-hydroxy-3-(phosphonooxy)propyl (9E)-octadec-9-enoate, BACTERIOCHLOROPHYLL A, ...
著者Gabdulkhakov, A.G, Fufina, T.Y, Vasilieva, L.G, Betzel, C, Selikhanov, G.K.
登録日2020-05-13
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center.
Iucrj, 7, 2020
6Z2X
DownloadVisualize
BU of 6z2x by Molmil
Mec1-Ddc2 (F2244L mutant) in complex with Mg AMP-PNP (State II)
分子名称: DNA damage checkpoint protein LCD1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Yates, L.A, Zhang, X.
登録日2020-05-18
公開日2020-11-11
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mechanism of auto-inhibition and activation of Mec1 ATR checkpoint kinase.
Nat.Struct.Mol.Biol., 28, 2021
7QCN
DownloadVisualize
BU of 7qcn by Molmil
Structure of the MUCIN-2 Cterminal domains: vWCN to TIL domains with a C2 symmetry
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Mucin-2, ...
著者Gallego, P, Hansson, G.C.
登録日2021-11-24
公開日2023-03-08
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The intestinal MUC2 mucin C-terminus is stabilized by an extra disulfide bond in comparison to von Willebrand factor and other gel-forming mucins.
Nat Commun, 14, 2023
6Z44
DownloadVisualize
BU of 6z44 by Molmil
Crystal structure of the cAMP-dependent protein kinase A in complex with phenol
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, DIMETHYL SULFOXIDE, PHENOL, ...
著者Oebbeke, M, Heine, A, Klebe, G.
登録日2020-05-22
公開日2020-12-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 60, 2021
6Z47
DownloadVisualize
BU of 6z47 by Molmil
Smooth muscle myosin shutdown state heads region
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Myosin heavy chain 11, ...
著者Scarff, C.A, Carrington, G, Casas Mao, D, Chalovich, J.M, Knight, P.J, Ranson, N.A, Peckham, M.
登録日2020-05-22
公開日2020-12-09
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (6.3 Å)
主引用文献Structure of the shutdown state of myosin-2.
Nature, 588, 2020
7QCU
DownloadVisualize
BU of 7qcu by Molmil
Structure of the MUCIN-2 Cterminal domains partially deglycosylated.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Mucin-2, ...
著者Gallego, P, Hansson, G.C.
登録日2021-11-25
公開日2023-03-08
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献The intestinal MUC2 mucin C-terminus is stabilized by an extra disulfide bond in comparison to von Willebrand factor and other gel-forming mucins.
Nat Commun, 14, 2023
7QCL
DownloadVisualize
BU of 7qcl by Molmil
Structure of the MUCIN-2 Cterminal domains
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Mucin-2, ...
著者Gallego, P, Hansson, G.C.
登録日2021-11-24
公開日2023-03-08
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献The intestinal MUC2 mucin C-terminus is stabilized by an extra disulfide bond in comparison to von Willebrand factor and other gel-forming mucins.
Nat Commun, 14, 2023
6ZDK
DownloadVisualize
BU of 6zdk by Molmil
Structure of the catalytic domain of human endo-alpha-mannosidase MANEA in complex with HEPES and hexatungstotellurate(VI) TEW
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 6-tungstotellurate(VI), Glycoprotein endo-alpha-1,2-mannosidase, ...
著者Sobala, L.F, Fernandes, P.Z, Hakki, Z, Thompson, A.J, Howe, J.D, Hill, M, Zitzmann, N, Davies, S, Stamataki, Z, Butters, T.D, Alonzi, D.S, Williams, S.J, Davies, G.J.
登録日2020-06-14
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of human endo-alpha-1,2-mannosidase (MANEA), an antiviral host-glycosylation target.
Proc.Natl.Acad.Sci.USA, 117, 2020
8SLV
DownloadVisualize
BU of 8slv by Molmil
Structure of a salivary alpha-glucosidase from the mosquito vector Aedes aegypti.
分子名称: 1,3-PROPANDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gittis, A.G, Williams, A.E, Garboczi, D, Calvo, E.
登録日2023-04-24
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structural and functional comparisons of salivary alpha-glucosidases from the mosquito vectors Aedes aegypti, Anopheles gambiae, and Culex quinquefasciatus.
Insect Biochem.Mol.Biol., 167, 2024
6ZJ8
DownloadVisualize
BU of 6zj8 by Molmil
Structure of the PAS domain from Bordetella pertussis BvgS
分子名称: Virulence sensor protein BvgS
著者Clantin, B, Dupre, E, Jacob-Dubuisson, F, Villeret, V.
登録日2020-06-28
公開日2020-11-11
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insight into the role of the PAS domainfor signal transduction in sensor-kinase BvgS.
J.Bacteriol., 203, 2021
6ZLI
DownloadVisualize
BU of 6zli by Molmil
CRYSTAL STRUCTURE OF KRAS-G12D IN COMPLEX WITH COMPOUND 13 AND GCP
分子名称: 2-[(2~{R})-piperidin-2-yl]-1~{H}-indole, GTPase KRas, MAGNESIUM ION, ...
著者Kessler, D, Fischer, G, Boettcher, J.
登録日2020-06-30
公開日2020-08-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Drugging all RAS isoforms with one pocket.
Future Med Chem, 12, 2020
6ZL5
DownloadVisualize
BU of 6zl5 by Molmil
CRYSTAL STRUCTURE OF KRAS-G12D(C118S) IN COMPLEX WITH BI-2852 AND GDP
分子名称: (3~{S})-3-[2-[[[1-[(1-methylimidazol-4-yl)methyl]indol-6-yl]methylamino]methyl]-1~{H}-indol-3-yl]-5-oxidanyl-2,3-dihydroisoindol-1-one, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
著者Kessler, D, Fischer, G, Boettcher, J.
登録日2020-06-30
公開日2020-08-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.645 Å)
主引用文献Drugging all RAS isoforms with one pocket.
Future Med Chem, 12, 2020

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon