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7T6Y
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d((CGA)5TGA) parallel-stranded homo-duplex
分子名称: BARIUM ION, DNA (5'-D(*CP*GP*AP*CP*GP*AP*CP*GP*AP*CP*GP*AP*CP*GP*AP*TP*GP*A)-3')
著者Luteran, E.M, Paukstelis, P.J.
登録日2021-12-14
公開日2021-12-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The parallel-stranded d(CGA) duplex is a highly predictable structural motif with two conformationally distinct strands.
Acta Crystallogr D Struct Biol, 78, 2022
4V15
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BU of 4v15 by Molmil
Crystal structure of D-threonine aldolase from Alcaligenes xylosoxidans
分子名称: D-THREONINE ALDOLASE, MANGANESE (II) ION, PYRIDOXAL-5'-PHOSPHATE, ...
著者Uhl, M.K, Oberdorfer, G, Steinkellner, G, Riegler, L, Schuermann, M, Gruber, K.
登録日2014-09-24
公開日2015-03-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Crystal Structure of D-Threonine Aldolase from Alcaligenes Xylosoxidans Provides Insight Into a Metal Ion Assisted Plp-Dependent Mechanism.
Plos One, 10, 2015
6PHQ
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BU of 6phq by Molmil
Crystal structure of glucagon analog fully composed of D-amino acids with 4-bromo-D-phenylalanine substitutions at position 6 and 22 in space group I41 at 1.1 A resolution
分子名称: D-glucagon D-BrPhe 6,22
著者Mroz, P.A, Gonzalez-Gutierrez, G, DiMarchi, R.D.
登録日2019-06-25
公開日2020-07-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献High resolution X-ray structure of glucagon and selected stereo-inversed analogs in novel crystallographic packing arrangement.
To Be Published
5MH6
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BU of 5mh6 by Molmil
D-2-hydroxyacid dehydrogenases (D2-HDH) from Haloferax mediterranei in complex with 2-ketohexanoic acid and NAD+ (1.35 A resolution)
分子名称: 1,2-ETHANEDIOL, 2-Ketohexanoic acid, D-2-hydroxyacid dehydrogenase, ...
著者Bisson, C, Baker, P.J, Domenech Perez, J, Pramanpol, N, Harding, S.E, Rice, D.W, Ferrer, J.
登録日2016-11-23
公開日2018-06-06
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Productive ternary complexes of D-2-hydroxyacid dehydrogenase provide insights into the chiral specificity of its reaction mechanism
To Be Published
7U9S
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Crystal structure of human D-amino acid oxidase in complex with inhibitor
分子名称: 5-{2-[4-(trifluoromethyl)phenyl]ethyl}-1,4-dihydropyrazine-2,3-dione, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
著者Skene, R.J, Bell, J.A.
登録日2022-03-11
公開日2022-06-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery of a Novel Class of d-Amino Acid Oxidase Inhibitors Using the Schrodinger Computational Platform.
J.Med.Chem., 65, 2022
7U9U
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BU of 7u9u by Molmil
Crystal structure of human D-amino acid oxidase in complex with inhibitor
分子名称: (3R)-3-(5,6-dioxo-1,4,5,6-tetrahydropyrazin-2-yl)-2,3-dihydro-1,4-benzoxathiine-7-carbonitrile, BENZOIC ACID, D-amino-acid oxidase, ...
著者Skene, R.J, Bell, J.A.
登録日2022-03-11
公開日2022-06-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Discovery of a Novel Class of d-Amino Acid Oxidase Inhibitors Using the Schrodinger Computational Platform.
J.Med.Chem., 65, 2022
7VHV
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BU of 7vhv by Molmil
Crystal structure of S. aureus D-alanine alanyl carrier protein ligase
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-alanine--D-alanyl carrier protein ligase, MAGNESIUM ION
著者Lee, B.J, Lee, I.-G, Im, H.G, Yoon, H.J.
登録日2021-09-23
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and functional analysis of the D-alanyl carrier protein ligase DltA from Staphylococcus aureus Mu50.
Acta Crystallogr D Struct Biol, 78, 2022
5BPF
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BU of 5bpf by Molmil
Crystal structure of ADP complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, D-alanine-D-alanine ligase, ...
著者Tran, H.T, Kang, L.W, Hong, M.K.
登録日2015-05-28
公開日2016-03-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
5BPH
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BU of 5bph by Molmil
Crystal structure of AMP complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: ACETATE ION, ADENOSINE MONOPHOSPHATE, D-alanine--D-alanine ligase, ...
著者Tran, H.T, Kang, L.W, Hong, M.K.
登録日2015-05-28
公開日2016-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
5MHA
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BU of 5mha by Molmil
D-2-hydroxyacid dehydrogenases (D2-HDH) from Haloferax mediterranei in complex with a mixture of 2-ketohexanoic acid and 2-hydroxyhexanoic acid, and NADPH (1.57 A resolution)
分子名称: (2R)-2-hydroxyhexanoic acid, 1,2-ETHANEDIOL, 2-Ketohexanoic acid, ...
著者Bisson, C, Baker, P.J, Domenech Perez, J, Pramanpol, N, Harding, S.E, Rice, D.W, Ferrer, J.
登録日2016-11-23
公開日2018-05-09
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Productive ternary complexes of D-2-hydroxyacid dehydrogenase provide insights into the chiral specificity of its reaction mechanism
To Be Published
5MH5
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BU of 5mh5 by Molmil
D-2-hydroxyacid dehydrogenases (D2-HDH) from Haloferax mediterranei in complex with 2-keto-hexanoic acid and NADP+ (1.4 A resolution)
分子名称: 2-Ketohexanoic acid, D-2-hydroxyacid dehydrogenase, MAGNESIUM ION, ...
著者Bisson, C, Baker, P.J, Domenech Perez, J, Pramanpol, N, Harding, S.E, Rice, D.W, Ferrer, J.
登録日2016-11-23
公開日2018-05-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Productive ternary complexes of D-2-hydroxyacid dehydrogenase provide insights into the chiral specificity of its reaction mechanism
To Be Published
4XKJ
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BU of 4xkj by Molmil
a Novel D-lactate Dehydrogenase from Sporolactobacillus sp
分子名称: D-lactate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Bo, Y, Hui, D, Xiang, L.
登録日2015-01-12
公開日2015-08-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.148 Å)
主引用文献a Novel D-lactate Dehydrogenase from Sporolactobacillus sp
To Be Published
4PNH
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Crystal structure of D,D-heptose 1,7-bisphosphate phosphatase from Burkholderia Thailandensis
分子名称: D,D-heptose 1,7-bisphosphate phosphatase
著者Kim, M.S, Shin, D.H.
登録日2014-05-23
公開日2015-06-24
最終更新日2015-07-01
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Crystal structure of D,D-heptose 1,7-bisphosphate phosphatase from Burkholderia Thailandensis
To Be Published
6RUJ
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BU of 6ruj by Molmil
Factor inhibiting HIF-1 alpha in complex with consensus ankyrin repeat domain-(d)3-hydroxy-Leu peptide
分子名称: CONSENSUS ANKYRIN REPEAT DOMAIN-(D)3-hydroxy-Leu, Hypoxia-inducible factor 1-alpha inhibitor, N-OXALYLGLYCINE, ...
著者Nakashima, Y, McDonough, M.A, Schofield, C.J.
登録日2019-05-28
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献A human protein hydroxylase that accepts D-residues
Commun Chem, 2020
5BRE
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BU of 5bre by Molmil
Crystal structure of Trypanosoma cruzi glucokinase in complex with inhibitor CBZ-GlcN
分子名称: 2-{[(benzyloxy)carbonyl]amino}-2-deoxy-beta-D-glucopyranose, Glucokinase 1, putative
著者D'Antonio, E.L, Perry, K, Deinema, M.S, Kearns, S.P, Frey, T.A.
登録日2015-05-30
公開日2015-06-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-based approach to the identification of a novel group of selective glucosamine analogue inhibitors of Trypanosoma cruzi glucokinase.
Mol.Biochem.Parasitol., 204, 2016
5BRD
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BU of 5brd by Molmil
Crystal structure of Trypanosoma cruzi glucokinase in complex with inhibitor BENZ-GlcN
分子名称: 2-(benzoylamino)-2-deoxy-beta-D-glucopyranose, Glucokinase 1, putative
著者D'Antonio, E.L, Perry, K, Deinema, M.S, Kearns, S.P, Frey, T.A.
登録日2015-05-30
公開日2015-06-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-based approach to the identification of a novel group of selective glucosamine analogue inhibitors of Trypanosoma cruzi glucokinase.
Mol.Biochem.Parasitol., 204, 2016
3KER
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BU of 3ker by Molmil
D-Dopachrome tautomerase (D-DT)/ macrophage migration inhibitory factor 2 (MIF2) complexed with inhibitor 4-IPP
分子名称: 4-phenylpyrimidine, CHLORIDE ION, D-dopachrome decarboxylase, ...
著者Zierow, S, Lolis, E.
登録日2009-10-26
公開日2010-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Targeting distinct tautomerase sites of D-DT and MIF with a single molecule for inhibition of neutrophil lung recruitment.
Faseb J., 28, 2014
4RSM
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BU of 4rsm by Molmil
Crystal structure of carbohydrate transporter msmeg_3599 from mycobacterium smegmatis str. mc2 155, target efi-510970, in complex with d-threitol
分子名称: D-Threitol, Periplasmic binding protein/LacI transcriptional regulator
著者Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Morisco, L.L, Wasserman, S.R, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Hillerich, B, Siedel, R.D, Love, J, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-11-08
公開日2014-12-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A General Strategy for the Discovery of Metabolic Pathways: d-Threitol, l-Threitol, and Erythritol Utilization in Mycobacterium smegmatis.
J.Am.Chem.Soc., 137, 2015
5BRF
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BU of 5brf by Molmil
Crystal structure of Trypanosoma cruzi glucokinase in complex with inhibitor HPOP-GlcN
分子名称: 2-deoxy-2-{[3-(4-hydroxyphenyl)propanoyl]amino}-alpha-D-glucopyranose, Glucokinase 1, putative
著者D'Antonio, E.L, Perry, K, Deinema, M.S, Kearns, S.P, Frey, T.A.
登録日2015-05-30
公開日2015-06-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Structure-based approach to the identification of a novel group of selective glucosamine analogue inhibitors of Trypanosoma cruzi glucokinase.
Mol.Biochem.Parasitol., 204, 2016
3K85
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Crystal structure of a D-glycero-D-manno-heptose 1-phosphate kinase from Bacteriodes thetaiotaomicron
分子名称: D-glycero-D-manno-heptose 1-phosphate kinase
著者Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-10-13
公開日2009-12-08
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal structure of a D-glycero-D-manno-heptose 1-phosphate kinase from Bacteriodes thetaiotaomicron
To be Published
3KAN
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BU of 3kan by Molmil
D-dopachrome tautomerase (D-DT)/macrophage migration inhibitory factor 2 (MIF2) complexed with inhibitor 4-IPP
分子名称: 4-phenylpyrimidine, CHLORIDE ION, D-dopachrome tautomerase
著者Zierow, S, Lolis, E.
登録日2009-10-19
公開日2011-04-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Targeting distinct tautomerase sites of D-DT and MIF with a single molecule for inhibition of neutrophil lung recruitment.
Faseb J., 28, 2014
3KOB
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BU of 3kob by Molmil
DTD from Plasmodium falciparum in complex with D-Glutamic acid
分子名称: D-GLUTAMIC ACID, D-tyrosyl-tRNA(Tyr) deacylase
著者Manickam, Y, Bhatt, T.K, Sharma, A.
登録日2009-11-13
公開日2009-12-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KOC
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BU of 3koc by Molmil
DTD from Plasmodium falciparum in complex with D-Histidine
分子名称: D-HISTIDINE, D-tyrosyl-tRNA(Tyr) deacylase
著者Manickam, Y, Bhatt, T.K, Sharma, A.
登録日2009-11-13
公開日2009-12-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KO7
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DTD from Plasmodium falciparum in complex with D-Lysine
分子名称: D-LYSINE, D-tyrosyl-tRNA(Tyr) deacylase
著者Manickam, Y, Bhatt, T.K, Sharma, A.
登録日2009-11-13
公開日2009-12-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KOD
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BU of 3kod by Molmil
DTD from Plasmodium falciparum in complex with D-Serine
分子名称: D-SERINE, D-tyrosyl-tRNA(Tyr) deacylase
著者Manickam, Y, Bhatt, T.K, Sharma, A.
登録日2009-11-13
公開日2009-12-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010

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