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4V6D
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BU of 4v6d by Molmil
Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Zhang, W, Dunkle, J.A, Cate, J.H.D.
登録日2009-06-27
公開日2014-07-09
最終更新日2014-12-10
実験手法X-RAY DIFFRACTION (3.814 Å)
主引用文献Structures of the ribosome in intermediate States of ratcheting.
Science, 325, 2009
7ELR
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BU of 7elr by Molmil
Crystal structure of xanthine riboswitch with xanthine
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, NMT1 (46-MER), ...
著者Xu, X.C, Ren, A.M.
登録日2021-04-12
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition.
Nucleic Acids Res., 49, 2021
7ELS
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BU of 7els by Molmil
Crystal structure of xanthine riboswitch with 8-azaxanthine
分子名称: 8-AZAXANTHINE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Xu, X.C, Ren, A.M.
登録日2021-04-12
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition.
Nucleic Acids Res., 49, 2021
7ELQ
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BU of 7elq by Molmil
Crystal structure of xanthine riboswitch with xanthine, manganese saok
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Xu, X.C, Ren, A.M.
登録日2021-04-12
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition.
Nucleic Acids Res., 49, 2021
7ELP
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BU of 7elp by Molmil
Crystal structure of xanthine riboswitch with xanthine, iridium hexammine soak
分子名称: GUANOSINE-5'-TRIPHOSPHATE, IRIDIUM ION, MAGNESIUM ION, ...
著者Xu, X.C, Ren, A.M.
登録日2021-04-12
公開日2021-06-30
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition.
Nucleic Acids Res., 49, 2021
2N7M
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BU of 2n7m by Molmil
NMR-SAXS/WAXS Structure of the core of the U4/U6 di-snRNA
分子名称: RNA (92-MER)
著者Cornilescu, G, Didychuk, A.L, Rodgers, M.L, Michael, L.A, Burke, J.E, Montemayor, E.J, Hoskins, A.A, Butcher, S.E, Tonelli, M.
登録日2015-09-14
公開日2015-12-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Analysis of Multi-Helical RNAs by NMR-SAXS/WAXS: Application to the U4/U6 di-snRNA.
J.Mol.Biol., 428, 2016
5I0X
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BU of 5i0x by Molmil
COPPER-BOUND M90I VARIANT OF UROPATHOGENIC ESCHERICHIA COLI STRAIN F11 FETP
分子名称: COPPER (II) ION, Periplasmic protein-probably involved in high-affinity Fe2+ transport
著者Chan, A.C, Murphy, M.E.
登録日2016-02-04
公開日2017-02-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A copper site is required for iron transport by the periplasmic proteins P19 and FetP.
Metallomics, 12, 2020
2RQU
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BU of 2rqu by Molmil
Solution structure of the complex between the DDEF1 SH3 domain and the APC SAMP1 motif
分子名称: 19-mer from Adenomatous polyposis coli protein, DDEF1_SH3
著者Kaieda, S, Matsui, C, Mimori-Kiyosue, Y, Ikegami, T.
登録日2009-12-14
公開日2010-07-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis of the recognition of the SAMP motif of adenomatous polyposis coli by the Src-homology 3 domain.
Biochemistry, 49, 2010
5I0Y
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BU of 5i0y by Molmil
COPPER-BOUND E46Q VARIANT OF UROPATHOGENIC ESCHERICHIA COLI STRAIN F11 FETP
分子名称: COPPER (II) ION, Periplasmic protein-probably involved in high-affinity Fe2+ transport
著者Chan, A.C, Murphy, M.E.
登録日2016-02-04
公開日2017-02-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A copper site is required for iron transport by the periplasmic proteins P19 and FetP.
Metallomics, 12, 2020
6NJT
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BU of 6njt by Molmil
Mouse endonuclease G mutant - H97A
分子名称: CHLORIDE ION, Endonuclease G, mitochondrial, ...
著者Vander Zanden, C.M, Ho, E.N, Czarny, R.S, Robertson, A.B, Ho, P.S.
登録日2019-01-04
公開日2020-01-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural adaptation of vertebrate endonuclease G for 5-hydroxymethylcytosine recognition and function.
Nucleic Acids Res., 48, 2020
6NJU
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BU of 6nju by Molmil
Mouse endonuclease G mutant H97A bound to A-DNA
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DNA (5'-D(CCGGCGCCGG)-3'), ...
著者Vander Zanden, C.M, Ho, E.N, Czarny, R.S, Robertson, A.B, Ho, P.S.
登録日2019-01-04
公開日2020-01-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural adaptation of vertebrate endonuclease G for 5-hydroxymethylcytosine recognition and function.
Nucleic Acids Res., 48, 2020
6NR7
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BU of 6nr7 by Molmil
Rerefinement of chicken vinculin
分子名称: (1R,2R,3S,4R,5R,6S)-4-{[(S)-[(2S)-2,3-dihydroxypropoxy](hydroxy)phosphoryl]oxy}-3,5,6-trihydroxycyclohexane-1,2-diyl bis[dihydrogen (phosphate)], PHOSPHATE ION, SULFATE ION, ...
著者Stec, B.
登録日2019-01-23
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Refined model of chicken vinculin suggests the mechanism of activation by helical super-bundle unfurling
To be published
6M67
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BU of 6m67 by Molmil
The Cryo-EM Structure of Human Pannexin 1 with D376E/D379E Mutation
分子名称: Pannexin-1
著者Jin, Q, Bo, Z, Xiang, Z, Xiaokang, Z, Ye, S.
登録日2020-03-13
公開日2020-04-15
最終更新日2020-05-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structures of human pannexin 1 channel.
Cell Res., 30, 2020
6LTO
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BU of 6lto by Molmil
cryo-EM structure of full length human Pannexin1
分子名称: Pannexin-1
著者Mou, L.Q, Ke, M, Xiao, Q.J, Wu, J.P, Deng, D.
登録日2020-01-23
公開日2020-05-13
最終更新日2020-05-27
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for gating mechanism of Pannexin 1 channel.
Cell Res., 30, 2020
6M68
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BU of 6m68 by Molmil
The Cryo-EM Structure of Human Pannexin 1 in the Presence of CBX
分子名称: Pannexin-1
著者Jin, Q, Bo, Z, Xiang, Z, Xiaokang, Z, Ye, S.
登録日2020-03-13
公開日2020-04-15
最終更新日2020-05-13
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Cryo-EM structures of human pannexin 1 channel.
Cell Res., 30, 2020
6M66
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BU of 6m66 by Molmil
The Cryo-EM Structure of Human Pannexin 1
分子名称: Pannexin-1
著者Jin, Q, Bo, Z, Xiang, Z, Xiaokang, Z, Ye, S.
登録日2020-03-13
公開日2020-04-15
最終更新日2020-05-13
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Cryo-EM structures of human pannexin 1 channel.
Cell Res., 30, 2020
8I5F
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BU of 8i5f by Molmil
Crystal structure of the DHR-2 domain of DOCK10 in complex with Cdc42 (T17N mutant)
分子名称: Cell division control protein 42 homolog, Dedicator of cytokinesis protein 10
著者Kukimoto-Niino, M, Mishima-Tsumagari, C, Fukui, Y, Yokoyama, S, Shirouzu, M.
登録日2023-01-25
公開日2023-03-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for the dual GTPase specificity of the DOCK10 guanine nucleotide exchange factor.
Biochem.Biophys.Res.Commun., 653, 2023
3LUE
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BU of 3lue by Molmil
Model of alpha-actinin CH1 bound to F-actin
分子名称: Actin, cytoplasmic 1, Alpha-actinin-3
著者Galkin, V.E, Orlova, A, Salmazo, A, Djinovic-Carugo, K, Egelman, E.H.
登録日2010-02-17
公開日2010-04-28
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献Opening of tandem calponin homology domains regulates their affinity for F-actin.
Nat.Struct.Mol.Biol., 17, 2010
7S0Y
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BU of 7s0y by Molmil
Structures of TcdB in complex with Cdc42
分子名称: Cell division control protein 42 homolog, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Zheng, L, Rongsheng, J, Peng, C.
登録日2021-08-31
公開日2021-09-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural basis for selective modification of Rho and Ras GTPases by Clostridioides difficile toxin B.
Sci Adv, 7, 2021
1E95
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BU of 1e95 by Molmil
Solution structure of the pseudoknot of SRV-1 RNA, involved in ribosomal frameshifting
分子名称: RNA (5'-(*GP*CP*GP*GP*CP*CP*AP*GP*CP*UP*CP* CP*AP*GP*GP*CP*CP*GP*CP*CP*AP*AP*AP*CP* AP*AP*UP*AP*UP*GP*GP*AP*GP*CP*AP*C)-3')
著者Michiels, P.J.A, Versleyen, A, Pleij, C.W.A, Hilbers, C.W, Heus, H.A.
登録日2000-10-09
公開日2001-08-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of the Pseudoknot of Srv-1 RNA, Involved in Ribosomal Frameshifting
J.Mol.Biol., 310, 2001
7SGZ
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BU of 7sgz by Molmil
Structure of the yeast Rad24-RFC loader bound to DNA and the closed 9-1-1 clamp
分子名称: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, Crick strand, ...
著者Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
登録日2021-10-07
公開日2022-03-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献DNA is loaded through the 9-1-1 DNA checkpoint clamp in the opposite direction of the PCNA clamp.
Nat.Struct.Mol.Biol., 29, 2022
7SH2
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BU of 7sh2 by Molmil
Structure of the yeast Rad24-RFC loader bound to DNA and the open 9-1-1 clamp
分子名称: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, Crick strand, ...
著者Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
登録日2021-10-07
公開日2022-03-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献DNA is loaded through the 9-1-1 DNA checkpoint clamp in the opposite direction of the PCNA clamp.
Nat.Struct.Mol.Biol., 29, 2022
167D
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BU of 167d by Molmil
THE CRYSTAL STRUCTURE OF C-C-A-T-T-A-A-T-G-G: IMPLICATIONS FOR BENDING OF B-DNA AT T-A STEPS
分子名称: DNA (5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3')
著者Goodsell, D.S, Kaczor-Grzeskowiak, M, Dickerson, R.E.
登録日1994-04-04
公開日1994-08-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of C-C-A-T-T-A-A-T-G-G. Implications for bending of B-DNA at T-A steps.
J.Mol.Biol., 239, 1994
6NBW
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BU of 6nbw by Molmil
Ternary Complex of Beta/Gamma-Actin with Profilin and AnCoA-NAA80
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Rebowski, G, Boczkowska, M, Dominguez, R.
登録日2018-12-10
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanism of actin N-terminal acetylation.
Sci Adv, 6, 2020
7AS4
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BU of 7as4 by Molmil
Recombinant human gTuRC
分子名称: Actin, cytoplasmic 1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Serna, M, Fernandez-Leiro, R, Llorca, O.
登録日2020-10-26
公開日2021-01-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.13 Å)
主引用文献Assembly of the asymmetric human gamma-tubulin ring complex by RUVBL1-RUVBL2 AAA ATPase.
Sci Adv, 6, 2020

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