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PDB: 13 results

2GRW
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Solution structure of the poliovirus 3'-UTR Y-stem
Descriptor: 5'-GGACCUCUCGAAAGAGAUGUCC-3'
Authors:Heus, H.A, Zoll, J, Tessari, M, van Kuppeveld, F.J.M, Melchers, W.J.G.
Deposit date:2006-04-25
Release date:2007-03-06
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Breaking pseudo-twofold symmetry in the poliovirus 3'-UTR Y-stem by restoring Watson-Crick base pairs.
Rna, 13, 2007
2GV4
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Solution structure of the poliovirus 3'-UTR Y-stem
Descriptor: Short RNA strand 5'-GGACCUCUCGAAAGAGUGGUCC-3'
Authors:Heus, H.A, Zoll, J, Tessari, M, van Kuppeveld, F.J.M, Melchers, W.J.G.
Deposit date:2006-05-02
Release date:2007-03-20
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Breaking pseudo-twofold symmetry in the poliovirus 3'-UTR Y-stem by restoring Watson-Crick base pairs.
Rna, 13, 2007
1A60
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NMR STRUCTURE OF A CLASSICAL PSEUDOKNOT: INTERPLAY OF SINGLE-AND DOUBLE-STRANDED RNA, 24 STRUCTURES
Descriptor: TYMV PSEUDOKNOT
Authors:Kolk, M.H, Van Der Graaf, M, Wijmenga, S.S, Pleij, C.W.A, Heus, H.A, Hilbers, C.W.
Deposit date:1998-03-04
Release date:1998-05-27
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR structure of a classical pseudoknot: interplay of single- and double-stranded RNA.
Science, 280, 1998
1ATO
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BU of 1ato by Molmil
THE STRUCTURE OF THE ISOLATED, CENTRAL HAIRPIN OF THE HDV ANTIGENOMIC RIBOZYME, NMR, 10 STRUCTURES
Descriptor: RNA (5'-R(*GP*GP*CP*AP*CP*CP*UP*CP*CP*UP*CP*GP*CP*GP*GP*UP*GP*CP*C)-3')
Authors:Kolk, M.H, Heus, H.A, Hilbers, C.W.
Deposit date:1997-08-14
Release date:1997-11-12
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The structure of the isolated, central hairpin of the HDV antigenomic ribozyme: novel structural features and similarity of the loop in the ribozyme and free in solution.
EMBO J., 16, 1997
3PHP
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BU of 3php by Molmil
STRUCTURE OF THE 3' HAIRPIN OF THE TYMV PSEUDOKNOT: PREFORMATION IN RNA FOLDING
Descriptor: RNA (5'-R(*GP*GP*UP*UP*CP*CP*GP*AP*GP*GP*GP*UP*CP*AP*UP*CP*GP*GP*AP*AP*CP*CP*A) -3')
Authors:Kolk, M.H, Van Der Graaf, M, Wijmenga, S.S, Pleij, C.W.A, Heus, H.A, Hilbers, C.W.
Deposit date:1998-10-13
Release date:1998-10-21
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of the 3'-hairpin of the TYMV pseudoknot: preformation in RNA folding.
EMBO J., 17, 1998
1ZIH
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GCAA RNA TETRALOOP, NMR, 10 STRUCTURES
Descriptor: RNA (5'-R(*GP*GP*GP*CP*GP*CP*AP*AP*GP*CP*CP*U)-3')
Authors:Jucker, F.M, Heus, H.A, Yip, P.F, Moors, E, Pardi, A.
Deposit date:1996-07-27
Release date:1997-03-12
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:A network of heterogeneous hydrogen bonds in GNRA tetraloops.
J.Mol.Biol., 264, 1996
1ZIF
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GAAA RNA TETRALOOP, NMR, 10 STRUCTURES
Descriptor: RNA (5'-R(*GP*GP*GP*CP*GP*AP*AP*AP*GP*CP*CP*U)-3')
Authors:Jucker, F.M, Heus, H.A, Yip, P.F, Moors, E, Pardi, A.
Deposit date:1996-07-27
Release date:1997-03-12
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:A network of heterogeneous hydrogen bonds in GNRA tetraloops.
J.Mol.Biol., 264, 1996
1ZIG
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GAGA RNA TETRALOOP, NMR, 10 STRUCTURES
Descriptor: RNA (5'-R(*GP*GP*GP*CP*GP*AP*GP*AP*GP*CP*CP*U)-3')
Authors:Jucker, F.M, Heus, H.A, Yip, P.F, Moors, E, Pardi, A.
Deposit date:1996-07-27
Release date:1997-03-12
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:A network of heterogeneous hydrogen bonds in GNRA tetraloops.
J.Mol.Biol., 264, 1996
1N66
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Structure of the pyrimidine-rich internal loop in the Y-domain of poliovirus 3'UTR
Descriptor: internal loop in the Y-domain of poliovirus 3'UTR
Authors:Lescrinier, E.M, Tessari, M, van Kuppeveld, F.J, Melchers, W.J, Hilbers, C.W, Heus, H.A.
Deposit date:2002-11-08
Release date:2003-08-19
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure of the Pyrimidine-rich Internal Loop in the Poliovirus 3'-UTR: The Importance of Maintaining Pseudo-2-fold Symmetry in RNA Helices Containing Two Adjacent Non-canonical Base-pairs.
J.Mol.Biol., 331, 2003
1E95
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Solution structure of the pseudoknot of SRV-1 RNA, involved in ribosomal frameshifting
Descriptor: RNA (5'-(*GP*CP*GP*GP*CP*CP*AP*GP*CP*UP*CP* CP*AP*GP*GP*CP*CP*GP*CP*CP*AP*AP*AP*CP* AP*AP*UP*AP*UP*GP*GP*AP*GP*CP*AP*C)-3')
Authors:Michiels, P.J.A, Versleyen, A, Pleij, C.W.A, Hilbers, C.W, Heus, H.A.
Deposit date:2000-10-09
Release date:2001-08-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution Structure of the Pseudoknot of Srv-1 RNA, Involved in Ribosomal Frameshifting
J.Mol.Biol., 310, 2001
1E4P
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Structure of the ribozyme substrate hairpin of Neurospora VS RNA. A close look at the cleavage site
Descriptor: RNA (5'-R(*GP*UP*GP*CP*GP*AP*AP*GP*AP*CP*GP*AP*AP* AP*GP*UP*CP*CP*GP*AP*GP*CP*GP*C)-3')
Authors:Michiels, P.J.A, Schouten, C.H.J, Heus, H.A, Hilbers, C.W.
Deposit date:2000-07-12
Release date:2001-01-16
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the Ribozyme Substrate Hairpin of Neurospora Vs RNA: A Close Look at the Cleavage Site
RNA, 6, 2000
2EVY
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GNYA tetranucleotide loops found in poliovirus oriL by in vivo SELEX (un)expectedly form a YNMG-like structure
Descriptor: Poliovirus 5'NTR cloverleaf stem loop D mutant
Authors:Melchers, W.J.G, Zoll, J, Tessari, M, Bakhmutov, D.V, Gmyl, A.P, Agol, V.I, Heus, H.A.
Deposit date:2005-11-01
Release date:2006-08-22
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:A GCUA tetranucleotide loop found in the poliovirus oriL by in vivo SELEX (un)expectedly forms a YNMG-like structure: Extending the YNMG family with GYYA.
RNA, 12, 2006
1EJZ
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SOLUTION STRUCTURE OF A HNA-RNA HYBRID
Descriptor: DNA (5'-H(*(6HG)P*(6HC)P*(6HG)P*(6HT)P*(6HA)P*(6HG)P*(6HC)P*(6HG))-3'), PHOSPHORIC ACID MONO-(3-HYDROXY-PROPYL) ESTER, RNA (5'-R(*CP*GP*CP*UP*AP*CP*GP*C)-3')
Authors:Lescrnier, E, Esnouf, R, Heus, H.A, Hilbers, C.W, Herdewijn, P.
Deposit date:2000-03-06
Release date:2000-10-23
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of a HNA-RNA hybrid.
Chem.Biol., 7, 2000

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