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8VMF
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Crystal structure of a transition-state mimic of the GSK-3/Axin complex bound to a beta-catenin S45D peptide
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Axin-1, ...
著者Enos, M.D, Gavagan, M, Jameson, N, Zalatan, J.G, Weis, W.I.
登録日2024-01-13
公開日2024-08-28
最終更新日2024-09-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and functional effects of phosphopriming and scaffolding in the kinase GSK-3 beta.
Sci.Signal., 17, 2024
8VME
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Crystal structure of the GSK-3/Axin complex bound to a phosphorylated beta-catenin T41A peptide
分子名称: ADENOSINE-5'-DIPHOSPHATE, Axin-1, Catenin beta-1, ...
著者Enos, M.D, Gavagan, M, Jameson, N, Zalatan, J.G, Weis, W.I.
登録日2024-01-13
公開日2024-08-28
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and functional effects of phosphopriming and scaffolding in the kinase GSK-3 beta.
Sci.Signal., 17, 2024
8VPI
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CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Containing Quinoline-based SGI-1027 Analog 462
分子名称: DNA Strand I, DNA Strand II, N-{3-[(2-amino-6-methylpyrimidin-4-yl)amino]-5-[(4-methylpiperazin-1-yl)methyl]phenyl}-3-[(quinolin-4-yl)amino]benzamide, ...
著者Zhou, J, Horton, J.R, Cheng, X.
登録日2024-01-16
公開日2024-09-25
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Quinoline-based compounds can inhibit diverse enzymes that act on DNA.
Biorxiv, 2024
8V57
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Complex of murine cathepsin K with bound cystatin C inhibitor
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin K, ...
著者Pedersen, L.C, Xu, D.
登録日2023-11-30
公開日2024-10-09
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Heparan sulfate selectively inhibits the collagenase activity of cathepsin K.
Matrix Biol., 129, 2024
8VCO
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Crystal structure of rMcL-1 in complex with N-acetyl-D-galactosamine
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Hernandez-Santoyo, A, Loera-Rubalcava, J.
登録日2023-12-14
公開日2024-12-18
最終更新日2025-05-21
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献A mytilectin from Mytilus californianus: Study of its unique galactoside interactions, oligomerization patterns, and antifungal activity.
Int.J.Biol.Macromol., 308, 2025
8VCS
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Crystal structure of the oligomeric rMcL-1 in complex with lactose
分子名称: CALCIUM ION, Galactose-binding lectin, beta-D-galactopyranose, ...
著者Hernandez-Santoyo, A, Loera-Rubalcava, J.
登録日2023-12-14
公開日2024-12-18
最終更新日2025-05-21
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献A mytilectin from Mytilus californianus: Study of its unique galactoside interactions, oligomerization patterns, and antifungal activity.
Int.J.Biol.Macromol., 308, 2025
8VOJ
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The Cryo-EM structure of LSD1-CoREST-HDAC1 in complex with KBTBD4 enhanced by UM171 and IP6
分子名称: (1r,4r)-N~1~-[(7P)-2-benzyl-7-(2-methyl-2H-tetrazol-5-yl)-9H-pyrimido[4,5-b]indol-4-yl]cyclohexane-1,4-diamine, Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, ...
著者Xie, X, Mao, H, Liau, B, Zheng, N.
登録日2024-01-15
公開日2024-12-04
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献UM171 glues asymmetric CRL3-HDAC1/2 assembly to degrade CoREST corepressors.
Nature, 639, 2025
6OM6
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Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Hoffer, E.D, Mehrani, A, Keiler, K.C, Stagg, S.M, Dunham, C.M.
登録日2019-04-18
公開日2021-02-10
最終更新日2025-03-19
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献trans-Translation inhibitors bind to a novel site on the ribosome and clear Neisseria gonorrhoeae in vivo.
Nat Commun, 12, 2021
8VTW
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Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-cyclopropyl-7-(4-{4-[({[(3aR,4R,7R,8S,9S,10R,11R,13R,14E,15S,15aR)-10-{[(2S,3R,4S,6R)-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl]oxy}-4-ethyl-11-methoxy-14-(methoxyimino)-3a,7,9,11,13,15-hexamethyl-2,6-dioxododecahydro-2H,4H-[1,3]dioxolo[4,5-c]oxacyclotetradecin-8-yl]oxy}carbonyl)amino]butyl}piperazin-1-yl)-6-fluoro-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (non-preferred name), 16S Ribosomal RNA, ...
著者Aleksandrova, E.V, Ma, C.-X, Klepacki, D, Alizadeh, F, Vazquez-Laslop, N, Liang, J.-H, Polikanov, Y.S, Mankin, A.S.
登録日2024-01-27
公開日2024-08-07
最終更新日2025-03-19
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Macrolones target bacterial ribosomes and DNA gyrase and can evade resistance mechanisms.
Nat.Chem.Biol., 20, 2024
8W9A
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BU of 8w9a by Molmil
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-7909 binding at an allosteric site
分子名称: 6-chloranyl-3-[[(1R)-1-[2-(1,3-dihydropyrrolo[3,4-c]pyridin-2-yl)-3,6-dimethyl-4-oxidanylidene-quinazolin-8-yl]ethyl]amino]pyridine-2-carboxylic acid, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Huang, X, Ren, X, Zhong, W.
登録日2023-09-05
公開日2024-04-17
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Cryo-EM structures reveal two allosteric inhibition modes of PI3K alpha H1047R involving a re-shaping of the activation loop.
Structure, 32, 2024
8W9D
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Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 1
分子名称: 3-DNA, 5-DNA, Chromatin modification-related protein EAF3, ...
著者Wang, C, Zhan, X.
登録日2023-09-05
公開日2024-05-15
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structures and dynamics of Rpd3S complex bound to nucleosome.
Sci Adv, 10, 2024
7OHR
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BU of 7ohr by Molmil
Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae
分子名称: 25S rRNA, 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ...
著者Milkereit, P, Poell, G.
登録日2021-05-11
公開日2021-11-10
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.72 Å)
主引用文献Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors.
Plos One, 16, 2021
8UNV
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CryoEM structure of beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (Class K)
分子名称: (5R,6R)-6-(methylamino)-5,6,7,8-tetrahydronaphthalene-1,2,5-triol, Beta-2 adrenergic receptor, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Papasergi-Scott, M.M, Skiniotis, G.
登録日2023-10-19
公開日2024-03-06
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Time-resolved cryo-EM of G-protein activation by a GPCR.
Nature, 629, 2024
8U7U
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Proteasome 20S Core Particle from Beta 3 D205 deletion
分子名称: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
著者Walsh Jr, R.M, Rawson, S, Velez, B, Blickling, M, Razi, A, Hanna, J.
登録日2023-09-15
公開日2024-04-17
最終更新日2024-09-04
実験手法ELECTRON MICROSCOPY (2.16 Å)
主引用文献Mechanism of autocatalytic activation during proteasome assembly.
Nat.Struct.Mol.Biol., 31, 2024
8UAT
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BU of 8uat by Molmil
Thermus scotoductus SA-01 Ene-reductase Compound 3b Complex
分子名称: 1-[2-(4-hydroxyphenyl)ethyl]-1,4-dihydropyridine-3-carboxamide, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
著者Wilson, L.A, Guddat, L.W, Schenk, G, Scott, C.
登録日2023-09-22
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Structural Characterization of Enzymatic Interactions with Functional Nicotinamide Cofactor Biomimetics
Catalysts, 14, 2024
8UVS
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Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution
分子名称: (2R,4R,4aS,5aR,6S,7S,8R,9S,9aR,10aS)-2-methyl-6,8-bis(methylamino)-4-({[2-(oxan-4-yl)ethyl]amino}methyl)octahydro-2H-pyrano[2,3-b][1,4]benzodioxine-4,4a,7,9(10aH)-tetrol, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
著者Killam, B.Y, Phelps, G.A, Lee, R.E, Polikanov, Y.S.
登録日2023-11-03
公開日2024-08-07
最終更新日2025-03-19
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Development of 2nd generation aminomethyl spectinomycins that overcome native efflux in Mycobacterium abscessus.
Proc.Natl.Acad.Sci.USA, 121, 2024
8UM0
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The structure of NanH in complex with Neu5,7,9Ac(2,6)-LAcNAc
分子名称: 1,2-ETHANEDIOL, 5-acetamido-7,9-di-O-acetyl-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid, Sialidase, ...
著者Medley, B.J, Boraston, A.B.
登録日2023-10-17
公開日2024-09-04
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献A "terminal" case of glycan catabolism: Structural and enzymatic characterization of the sialidases of Clostridium perfringens.
J.Biol.Chem., 300, 2024
8UFY
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BU of 8ufy by Molmil
High Resolution structure of A. viridans Lactate Oxidase
分子名称: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, L-lactate oxidase, ...
著者Lodowski, D.T.
登録日2023-10-05
公開日2024-08-14
最終更新日2024-08-28
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献An engineered lactate oxidase based electrochemical sensor for continuous detection of biomarker lactic acid in human sweat and serum.
Heliyon, 10, 2024
8UXQ
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Structure of Heterochromatin Protein 1 (HP1) alpha in complex with an H2A.Z nucleosome
分子名称: Chromobox protein homolog 5, DNA Widom601 (208bp) strand1, DNA Widom601 (208bp) strand2, ...
著者Tan, D, Sokolova, V.
登録日2023-11-09
公開日2024-09-25
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (6.3 Å)
主引用文献Structural mechanism of HP1⍺-dependent transcriptional repression and chromatin compaction.
Structure, 32, 2024
8UX6
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Structure of Fab201 with a T. parva sporozoite neutralizing B cell epitope of p67
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
著者Singer, A.U, Gopalsamy, A, Fellouse, F.A, Miersch, S, Sidhu, S.S.
登録日2023-11-08
公開日2024-10-16
最終更新日2025-05-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular characterization of a synthetic neutralizing antibody targeting p67 of Theileria parva.
Protein Sci., 34, 2025
8PMR
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BU of 8pmr by Molmil
NADase from Aspergillus fumigatus with mutated calcium binding motif (D219A/E220A)
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kallio, J.P, Ferrario, E, Stromland, O, Ziegler, M.
登録日2023-06-29
公開日2023-11-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Novel Calcium-Binding Motif Stabilizes and Increases the Activity of Aspergillus fumigatus Ecto-NADase.
Biochemistry, 62, 2023
8UL1
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Structure of rsKiiro using SSX after illumination with 0.1 mJ/mm^2 of 405 nm light
分子名称: GLYCEROL, SULFATE ION, rsKiiro trans structure
著者Baxter, J.M, van Thor, J.J.
登録日2023-10-16
公開日2024-11-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Power Density Titration of Reversible Photoisomerization of a Fluorescent Protein Chromophore in the Presence of Thermally Driven Barrier Crossing Shown by Quantitative Millisecond Serial Synchrotron X-ray Crystallography.
J.Am.Chem.Soc., 146, 2024
6WML
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Human TLR8 bound to the potent agonist, GS-9688 (Selgantolimod)
分子名称: (2R)-2-[(2-amino-7-fluoropyrido[3,2-d]pyrimidin-4-yl)amino]-2-methylhexan-1-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor 8, ...
著者Appleby, T.C, Perry, J.K, Mish, M, Villasenor, A.G, Mackman, R.L.
登録日2020-04-21
公開日2021-02-03
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Discovery of GS-9688 (Selgantolimod) as a Potent and Selective Oral Toll-Like Receptor 8 Agonist for the Treatment of Chronic Hepatitis B.
J.Med.Chem., 63, 2020
8VOI
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HADDOCK models of active human alphaM I-domain bound to the the C-terminal domain of the cytokine pleiotrophin
分子名称: Integrin alpha-M, MAGNESIUM ION, Pleiotrophin
著者Wang, X, Nguyen, H.
登録日2024-01-15
公開日2024-05-15
最終更新日2025-05-28
実験手法SOLUTION NMR
主引用文献alpha M I-domain of integrin Mac-1 binds the cytokine pleiotrophin using multiple mechanisms.
Structure, 32, 2024
8VOH
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HADDOCK models of human alphaM I-domain bound to the the N-terminal domain of the cytokine pleiotrophin
分子名称: Integrin alpha-M, Pleiotrophin
著者Wang, X, Nguyen, H.
登録日2024-01-15
公開日2024-05-15
最終更新日2025-05-28
実験手法SOLUTION NMR
主引用文献alpha M I-domain of integrin Mac-1 binds the cytokine pleiotrophin using multiple mechanisms.
Structure, 32, 2024

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件を2025-11-19に公開中

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