Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6KM7
DownloadVisualize
BU of 6km7 by Molmil
The structural basis for the internal interaction in RBBP5
分子名称: HEXAETHYLENE GLYCOL, NONAETHYLENE GLYCOL, Retinoblastoma-binding protein 5, ...
著者Han, J, Li, T, Chen, Y.
登録日2019-07-31
公開日2019-10-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献The internal interaction in RBBP5 regulates assembly and activity of MLL1 methyltransferase complex.
Nucleic Acids Res., 47, 2019
5A16
DownloadVisualize
BU of 5a16 by Molmil
Crystal structure of Fab4201 raised against Human Erythrocyte Anion Exchanger 1
分子名称: FAB4201 HEAVY CHAIN
著者Arakawa, T, Kobayashi-Yugiri, T, Alguel, Y, Weyand, S, Iwanari, H, Hatae, H, Iwata, M, Abe, Y, Hino, T, Ikeda-Suno, C, Kuma, H, Kang, D, Murata, T, Hamakubo, T, Cameron, A, Kobayashi, T, Hamasaki, N, Iwata, S.
登録日2015-04-28
公開日2015-06-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of the Anion Exchanger Domain of Human Erythrocyte Band 3
Science, 350, 2015
5I8P
DownloadVisualize
BU of 5i8p by Molmil
Crystal structure of LP_PLA2 in complex with novel inhibitor
分子名称: 6-[1,1-bis(oxidanylidene)-1,4-thiazinan-4-yl]-4-[[4-[4-chloranyl-3-(trifluoromethyl)phenoxy]-3,5-bis(fluoranyl)phenyl]methoxy]-1-methyl-pyrimidin-2-one, Platelet-activating factor acetylhydrolase
著者Liu, Q.F, Xu, Y.C.
登録日2016-02-19
公開日2016-06-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Structural and Thermodynamic Characterization of Protein-Ligand Interactions Formed between Lipoprotein-Associated Phospholipase A2 and Inhibitors
J.Med.Chem., 59, 2016
5IH5
DownloadVisualize
BU of 5ih5 by Molmil
Human Casein Kinase 1 isoform delta (kinase domain) in complex with Epiblastin A
分子名称: 6-(3-chlorophenyl)pteridine-2,4,7-triamine, Casein kinase I isoform delta, S,R MESO-TARTARIC ACID, ...
著者Ursu, A, Illich, D.J, Takemoto, Y, Porfetye, A.T, Zhang, M, Brockmeyer, A, Janning, P, Watanabe, N, Osada, H, Vetter, I.R, Ziegler, S, Schoeler, H.R, Waldmann, H.
登録日2016-02-29
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Epiblastin A Induces Reprogramming of Epiblast Stem Cells Into Embryonic Stem Cells by Inhibition of Casein Kinase 1.
Cell Chem Biol, 23, 2016
6J39
DownloadVisualize
BU of 6j39 by Molmil
Crystal structure of CmiS2 with inhibitor
分子名称: (3R)-3-[(carboxymethyl)sulfanyl]nonanoic acid, FAD-dependent glycine oxydase, FLAVIN-ADENINE DINUCLEOTIDE
著者Kawasaki, D, Chisuga, T, Miyanaga, A, Kudo, F, Eguchi, T.
登録日2019-01-04
公開日2019-06-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural Analysis of the Glycine Oxidase Homologue CmiS2 Reveals a Unique Substrate Recognition Mechanism for Formation of a beta-Amino Acid Starter Unit in Cremimycin Biosynthesis.
Biochemistry, 58, 2019
4YI8
DownloadVisualize
BU of 4yi8 by Molmil
Crystal structure of non-myristoylated E153A recoverin at 1.2 A resolution with calcium ions bound to EF-hands 2 and 3
分子名称: CALCIUM ION, Recoverin, SULFATE ION
著者Prem Kumar, R, Ranaghan, M.J, Oprian, D.D.
登録日2015-02-28
公開日2015-12-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal Structure of Recoverin with Calcium Ions Bound to Both Functional EF Hands.
Biochemistry, 54, 2015
5GL1
DownloadVisualize
BU of 5gl1 by Molmil
Structure of RyR1 in an open state
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ZINC ION
著者Bai, X.C, Yan, Z, Wu, J.P, Yan, N.
登録日2016-07-07
公開日2016-08-24
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献The Central domain of RyR1 is the transducer for long-range allosteric gating of channel opening
Cell Res., 26, 2016
4Y6P
DownloadVisualize
BU of 4y6p by Molmil
Structure of Plasmodium falciparum DXR in complex with a beta-substituted fosmidomycin analogue, RC177, and manganese
分子名称: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplast, CALCIUM ION, ...
著者Sooriyaarachchi, S, Bergfors, T, Jones, T.A, Mowbray, S.L.
登録日2015-02-13
公開日2015-04-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Synthesis and Bioactivity of beta-Substituted Fosmidomycin Analogues Targeting 1-Deoxy-d-xylulose-5-phosphate Reductoisomerase.
J.Med.Chem., 58, 2015
6JD7
DownloadVisualize
BU of 6jd7 by Molmil
Crystal structure of anti-CRISPR protein AcrIIC2 dimer
分子名称: ACETATE ION, AcrIIC2, MAGNESIUM ION
著者Cheng, Z, Huang, X, Sun, W, Wang, Y.L.
登録日2019-01-31
公開日2019-05-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Inhibition of CRISPR-Cas9 ribonucleoprotein complex assembly by anti-CRISPR AcrIIC2.
Nat Commun, 10, 2019
6JDV
DownloadVisualize
BU of 6jdv by Molmil
Crystal structure of Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in catalytic state
分子名称: 1,2-ETHANEDIOL, CRISPR-associated endonuclease Cas9, MAGNESIUM ION, ...
著者Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
登録日2019-02-02
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
5H3X
DownloadVisualize
BU of 5h3x by Molmil
The structure of the N-terminal of the fibronectin/fibrinogen-binding protein from Streptococcus suis (FBPS)
分子名称: Fibronectin/fibrinogen binding protein
著者MokiMusyoki, A, Qi, J, Gao, G.F.
登録日2016-10-27
公開日2016-11-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional analysis of an anchorless fibronectin-binding protein FBPS from Gram-positive bacterium Streptococcus suis
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
4YF4
DownloadVisualize
BU of 4yf4 by Molmil
Crystal structure of Rv1284 in the presence of polycarpine at mildly acidic pH
分子名称: Beta-carbonic anhydrase 1, CHLORIDE ION, MAGNESIUM ION, ...
著者Hofmann, A.
登録日2015-02-25
公開日2015-05-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Chemical probing suggests redox-regulation of the carbonic anhydrase activity of mycobacterial Rv1284.
Febs J., 282, 2015
5H2M
DownloadVisualize
BU of 5h2m by Molmil
A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 13.8 us after photoexcitation
分子名称: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, DECANE, ...
著者Royant, A, Nango, E, Nakane, T, Tanaka, T, Arima, T, Neutze, R, Iwata, S.
登録日2016-10-15
公開日2016-12-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A three-dimensional movie of structural changes in bacteriorhodopsin
Science, 354, 2016
5H3U
DownloadVisualize
BU of 5h3u by Molmil
Sm RNA bound to GEMIN5-WD
分子名称: GLYCEROL, Gem-associated protein 5, RNA (5'-R(*AP*AP*UP*UP*UP*UP*UP*GP*AP*C)-3')
著者Bharath, S.R, Tang, X, Song, H.
登録日2016-10-27
公開日2016-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Structural basis for specific recognition of pre-snRNA by Gemin5
Cell Res., 26, 2016
5GU7
DownloadVisualize
BU of 5gu7 by Molmil
Crystal Structure of human ERp44 form II
分子名称: Endoplasmic reticulum resident protein 44
著者Watanabe, S, Inaba, K.
登録日2016-08-26
公開日2017-04-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis of pH-dependent client binding by ERp44, a key regulator of protein secretion at the ER-Golgi interface
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6HWG
DownloadVisualize
BU of 6hwg by Molmil
[Ru(phen)2(dppz-11-CN)]2+ bound to d(TCGGCGCCGA)2
分子名称: BARIUM ION, DNA (5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3'), Ruthenium (bis-(phenanthroline)) (11-cyano-dipyridophenazine)
著者McQuaid, K.T, Hall, J.P, Cardin, C.J.
登録日2018-10-11
公開日2019-10-30
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献[Ru(phen)2(dppz-11-CN)]2+ bound to d(TCGGCGCCGA)2
To Be Published
6HY2
DownloadVisualize
BU of 6hy2 by Molmil
Structure guided design of an antibacterial peptide that targets UDP-N-acetylglucosamine acyltransferase
分子名称: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, TRP-MET-LEU-ASP-PRO-ILE-ALA-GLY-LYS-TRP-SER-ARG
著者Williams, A.H, Dangkulwanich, M.
登録日2018-10-19
公開日2019-01-23
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure guided design of an antibacterial peptide that targets UDP-N-acetylglucosamine acyltransferase.
Sci Rep, 9, 2019
5IHE
DownloadVisualize
BU of 5ihe by Molmil
D-family DNA polymerase - DP1 subunit (3'-5' proof-reading exonuclease)
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, ACETATE ION, ...
著者Sauguet, L, Raia, P, De Larue, M.
登録日2016-02-29
公開日2016-08-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Shared active site architecture between archaeal PolD and multi-subunit RNA polymerases revealed by X-ray crystallography.
Nat Commun, 7, 2016
5AFW
DownloadVisualize
BU of 5afw by Molmil
Assembly of methylated LSD1 and CHD1 drives AR-dependent transcription and translocation
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1, ...
著者Metzger, E, Willmann, D, McMillan, J, Petroll, K, Metzger, P, Gerhardt, S, vonMaessenhausen, A, Schott, A.K, Espejo, A, Eberlin, A, Wohlwend, D, Schuele, K.M, Schleicher, M, Perner, S, Bedford, M.T, Dengjel, J, Flaig, R, Einsle, O, Schuele, R.
登録日2015-01-26
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Assembly of Methylated Kdm1A and Chd1 Drives Androgen Receptor-Dependent Transcription and Translocation.
Nat.Struct.Mol.Biol., 23, 2016
5AHT
DownloadVisualize
BU of 5aht by Molmil
Third WW domain from the E3 ubiquitin-protein ligase NEDD4
分子名称: E3 UBIQUITIN-PROTEIN LIGASE NEDD4
著者Panwalkar, V, Lecher, J, Dingley, A.
登録日2015-02-09
公開日2016-01-27
最終更新日2024-01-31
実験手法SOLUTION NMR
主引用文献The Nedd4-1 Ww Domain Recognizes the Py Motif Peptide Through Coupled Folding and Binding Equilibria.
Biochemistry, 55, 2016
5AIK
DownloadVisualize
BU of 5aik by Molmil
Human DYRK1A in complex with LDN-211898
分子名称: 4-(7-METHOXY-1-(TRIFLUOROMETHYL)-9H-PYRIDO[3,4-B]INDOL-9-yl)butan-1-amine, DYRK1A DUAL-SPECIFICITY TYROSINE-PHOSPHORYLATION REGULATED KINASE 1A, PHOSPHATE ION
著者Elkins, J.M, Soundararajan, M, Muniz, J.R.C, Cuny, G, Higgins, J, Edwards, A, Bountra, C, Knapp, S.
登録日2015-02-15
公開日2015-02-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Dyrk1A with Ldn-211898
To be published
6I22
DownloadVisualize
BU of 6i22 by Molmil
Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism
分子名称: Aureochrome1-like protein, FLAVIN MONONUCLEOTIDE
著者Rizkallah, P.J, Kalvaitis, M.E, Allemann, R.K, Mart, R.J, Johnson, L.A.
登録日2018-10-31
公開日2019-05-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献A Noncanonical Chromophore Reveals Structural Rearrangements of the Light-Oxygen-Voltage Domain upon Photoactivation.
Biochemistry, 58, 2019
6I2P
DownloadVisualize
BU of 6i2p by Molmil
Crystal structure of the Mycobacterium tuberculosis PknB kinase domain (L33E mutant) in complex with its substrate GarA
分子名称: Glycogen accumulation regulator GarA, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Andre-Leroux, G, Hindie, V, Barilone, N, Bellinzoni, M, Alzari, P.M.
登録日2018-11-01
公開日2019-05-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Structural insights into the functional versatility of an FHA domain protein in mycobacterial signaling.
Sci.Signal., 12, 2019
6I8V
DownloadVisualize
BU of 6i8v by Molmil
KtrC with ATP bound
分子名称: 1,4-BUTANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
著者Rocha, R, Morais-Cabral, J.H.
登録日2018-11-21
公開日2019-10-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.991 Å)
主引用文献Characterization of the molecular properties of KtrC, a second RCK domain that regulates a Ktr channel in Bacillus subtilis.
J.Struct.Biol., 205, 2019
6I90
DownloadVisualize
BU of 6i90 by Molmil
R2-like ligand-binding oxidase G68F mutant with aerobically reconstituted Mn/Fe cofactor
分子名称: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ...
著者Griese, J.J, Hogbom, M.
登録日2018-11-22
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Chemical flexibility of heterobimetallic Mn/Fe cofactors: R2lox and R2c proteins.
J.Biol.Chem., 294, 2019

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon