Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6SSZ
DownloadVisualize
BU of 6ssz by Molmil
Structure of the Plasmodium falciparum falcipain 2 protease in complex with an (E)-chalcone inhibitor.
分子名称: (~{E})-3-(1,3-benzodioxol-5-yl)-1-(3-nitrophenyl)prop-2-en-1-one, Cysteine proteinase falcipain 2a
著者Machin, J, Kantsadi, A, Vakonakis, I.
登録日2019-09-09
公開日2019-12-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献The complex of Plasmodium falciparum falcipain-2 protease with an (E)-chalcone-based inhibitor highlights a novel, small, molecule-binding site.
Malar.J., 18, 2019
6TCX
DownloadVisualize
BU of 6tcx by Molmil
Papain bound to a natural cysteine protease inhibitor from Streptomyces mobaraensis
分子名称: (2~{R})-2-[[(1~{S})-1-[(6~{S})-2-azanyl-1,4,5,6-tetrahydropyrimidin-6-yl]-2-[[(2~{S})-3-methyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-phenyl-propan-2-yl]amino]butan-2-yl]amino]-2-oxidanylidene-ethyl]carbamoylamino]-3-(4-hydroxyphenyl)propanoic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Papain
著者Kraemer, A, Juettner, N.E, Fuchsbauer, H.-L, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2019-11-06
公開日2019-12-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Decoding the Papain Inhibitor from Streptomyces mobaraensis as Being Hydroxylated Chymostatin Derivatives: Purification, Structure Analysis, and Putative Biosynthetic Pathway.
J.Nat.Prod., 83, 2020
6JD0
DownloadVisualize
BU of 6jd0 by Molmil
Structure of mutant human cathepsin L, engineered for GAG binding
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Cathepsin L1, ...
著者Choudhury, D, Biswas, S.
登録日2019-01-30
公開日2020-02-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.805 Å)
主引用文献Structure-guided protein engineering of human cathepsin L for efficient collagenolytic activity.
Protein Eng.Des.Sel., 34, 2021
6JD8
DownloadVisualize
BU of 6jd8 by Molmil
Structure of a proline specific mutant of human cathepsin L
分子名称: 1,2-ETHANEDIOL, Cathepsin L1, DI(HYDROXYETHYL)ETHER, ...
著者Choudhury, D, Biswas, S.
登録日2019-01-31
公開日2020-02-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.457 Å)
主引用文献Structure-guided protein engineering of human cathepsin L for efficient collagenolytic activity.
Protein Eng.Des.Sel., 34, 2021
6QL8
DownloadVisualize
BU of 6ql8 by Molmil
Cathepsin-K in complex with MIV-711
分子名称: Cathepsin K, NITRATE ION, ~{N}-[(2~{S})-1-[(3~{R},3~{a}~{R},6~{R},6~{a}~{R})-6-ethynyl-3-oxidanyl-2,3,3~{a},5,6,6~{a}-hexahydrofuro[3,2-b]pyrrol-4-yl]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-[5-fluoranyl-2-(4-methylpiperazin-1-yl)-1,3-thiazol-4-yl]benzamide
著者Derbyshire, D.J.
登録日2019-01-31
公開日2020-02-19
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Successful development of 3-oxohexahydrofuropyrrole amino acid amides as inhibitors of Cathepsin-K.
To Be Published
6QLM
DownloadVisualize
BU of 6qlm by Molmil
Cathepsin-K in complex with MIV-701
分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, Cathepsin K, GLYCEROL, ...
著者Derbyshire, D.J.
登録日2019-02-01
公開日2020-02-19
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Successful development of 3-oxohexahydrofuropyrrole amino acid amides as inhibitors of Cathepsin-K.
To Be Published
6QM0
DownloadVisualize
BU of 6qm0 by Molmil
Cathepsin-K in complex with amino-oxaazabicyclo[3.3.0]octanyl containing inhibitor
分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, Cathepsin K, ~{N}-[(2~{S})-1-[(3~{R},3~{a}~{R},6~{R},6~{a}~{R})-6-azanyl-3-oxidanyl-2,3,3~{a},5,6,6~{a}-hexahydrofuro[3,2-b]pyrrol-4-yl]-4-methyl-1-oxidanylidene-pentan-2-yl]-3-fluoranyl-4-[2-(4-methylpiperazin-1-yl)-1,3-thiazol-4-yl]benzamide
著者Derbyshire, D.J.
登録日2019-02-01
公開日2020-02-19
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Successful development of 3-oxohexahydrofuropyrrole amino acid amides as inhibitors of Cathepsin-K.
To Be Published
6QLX
DownloadVisualize
BU of 6qlx by Molmil
Cathepsin-K in complex with fluoro-oxa-azabicyclo[3.3.0]octanyl containing inhibitor
分子名称: Cathepsin K, ~{N}-[(2~{S})-1-[(3~{R},3~{a}~{R},6~{S},6~{a}~{S})-6-fluoranyl-3-oxidanyl-2,3,3~{a},5,6,6~{a}-hexahydrofuro[3,2-b]pyrrol-4-yl]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-thiophen-2-yl-benzamide
著者Derbyshire, D.J.
登録日2019-02-01
公開日2020-02-19
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Successful development of 3-oxohexahydrofuropyrrole amino acid amides as inhibitors of Cathepsin-K.
To Be Published
6QLW
DownloadVisualize
BU of 6qlw by Molmil
Cathepsin-K in complex with MIV-710
分子名称: CHLORIDE ION, Cathepsin K, SODIUM ION, ...
著者Derbyshire, D.J.
登録日2019-02-01
公開日2020-02-19
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Successful development of 3-oxohexahydrofuropyrrole amino acid amides as inhibitors of Cathepsin-K.
To Be Published
6JW9
DownloadVisualize
BU of 6jw9 by Molmil
Crystal structure of E-64 inhibited falcipain 2 from Plasmodium falciparum, strain 3D7
分子名称: Cysteine protease falcipain-2, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE
著者Chakraborty, S, Alam, B, Biswas, S.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献New insights of falcipain 2 structure from Plasmodium falciparum 3D7 strain.
Biochem.Biophys.Res.Commun., 590, 2022
6P4E
DownloadVisualize
BU of 6p4e by Molmil
Leishmania mexicana CPB in complex with an aza-nitrile inhibitor
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-tert-butyl-N-[(2S)-1-(2-cyano-1,2-dimethylhydrazinyl)-4-methyl-1-oxopentan-2-yl]-1-methyl-1H-pyrazole-5-carboxamide (non-preferred name), ...
著者Ribeiro, J.F.R, Li, C, De Vita, D, Emsley, J, Montanari, C.A.
登録日2019-05-27
公開日2020-06-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献High Resolution X-Ray Crystal Structures of LmCPB2.8 Co-Crystalized with Dipeptidyl Aza-nitrile Inhibitor and Structure Activity Relationships
To Be Published
6PXF
DownloadVisualize
BU of 6pxf by Molmil
Structure of human Cathepsin K with an ectosteric inhibitor at 1.85 Angstrom resolution
分子名称: 1,6,6-trimethyl-10,11-dioxo-6,7,8,9,10,11-hexahydrophenanthro[1,2-b]furan-2-sulfonic acid, Cathepsin K
著者Law, S, Aguda, A.H, Nguyen, N.T, Brayer, G.D, Bromme, D.
登録日2019-07-25
公開日2020-07-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of human Cathepsin K with an ectosteric inhibitor at 1.85 Angstrom resolution
To Be Published
6X44
DownloadVisualize
BU of 6x44 by Molmil
High Resolution Crystal Structure Analysis of SERA5 proenzyme from plasmodium falciparum
分子名称: DI(HYDROXYETHYL)ETHER, Serine repeat antigen 5
著者Clarke, O.B, Smith, N.A, Lee, M, Smith, B.J.
登録日2020-05-22
公開日2020-10-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.19733953 Å)
主引用文献Structure of the Plasmodium falciparum PfSERA5 pseudo-zymogen.
Protein Sci., 29, 2020
6X42
DownloadVisualize
BU of 6x42 by Molmil
High Resolution Crystal Structure Analysis of SERA5E from plasmodium falciparum
分子名称: 1,2-ETHANEDIOL, 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, CALCIUM ION, ...
著者Clarke, O.B, Smith, N.A, Lee, M, Smith, B.J.
登録日2020-05-21
公開日2020-10-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure of the Plasmodium falciparum PfSERA5 pseudo-zymogen.
Protein Sci., 29, 2020
6UX6
DownloadVisualize
BU of 6ux6 by Molmil
Cruzain covalently bound by a vinylsulfone compound
分子名称: Cruzipain, GLYCEROL, Nalpha-[(benzyloxy)carbonyl]-N-[(2S)-1-phenyl-4-(phenylsulfonyl)butan-2-yl]-L-phenylalaninamide
著者Zhai, X, Tang, S, Chenna, B.C, Meek, T.D, Sacchettini, J.C.
登録日2019-11-06
公開日2020-11-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Cruzain covalently bound by a vinylsulfone compound
To Be Published
6Y6L
DownloadVisualize
BU of 6y6l by Molmil
Structure the ananain protease from Ananas comosus with a thiomethylated catalytic cysteine
分子名称: Ananain, GLYCEROL, SULFATE ION
著者Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
登録日2020-02-26
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
6YCB
DownloadVisualize
BU of 6ycb by Molmil
Structure the ananain protease from Ananas comosus covalently bound to with the E64 inhibitor
分子名称: Ananain, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
登録日2020-03-18
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.257 Å)
主引用文献Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
6YCE
DownloadVisualize
BU of 6yce by Molmil
Structure the bromelain protease from Ananas comosus with a thiomethylated active cysteine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FBSB, ISOPROPYL ALCOHOL, ...
著者Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
登録日2020-03-18
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
6YCF
DownloadVisualize
BU of 6ycf by Molmil
Structure the bromelain protease from Ananas comosus in complex with the E64 inhibitor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, FBSB, ...
著者Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
登録日2020-03-18
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
6YCD
DownloadVisualize
BU of 6ycd by Molmil
Structure the ananain protease from Ananas comosus covalently bound to the TLCK inhibitor
分子名称: Ananain, GLYCEROL, N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide, ...
著者Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
登録日2020-03-18
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
6YCG
DownloadVisualize
BU of 6ycg by Molmil
Structure the bromelain protease from Ananas comosus in complex with the TLCK inhibitor
分子名称: CITRIC ACID, FBSB, ISOPROPYL ALCOHOL, ...
著者Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
登録日2020-03-18
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
7AVM
DownloadVisualize
BU of 7avm by Molmil
Crystal Structure of Pro-Rhodesain C150A
分子名称: Cysteine protease, GLYCEROL
著者Johe, P, Jaenicke, E, Neuweiler, H, Schirmeister, T, Kersten, C, Hellmich, U.
登録日2020-11-05
公開日2020-11-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure, interdomain dynamics, and pH-dependent autoactivation of pro-rhodesain, the main lysosomal cysteine protease from African trypanosomes.
J.Biol.Chem., 296, 2021
6YCC
DownloadVisualize
BU of 6ycc by Molmil
Structure the ananain protease from Ananas comosus covalently bound to the E64 inhibitor
分子名称: Ananain, GLYCEROL, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, ...
著者Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
登録日2020-03-18
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
6ZQ3
DownloadVisualize
BU of 6zq3 by Molmil
Crystal Structure of Silicatein Alpha from Marine Sponge Tethya aurantium
分子名称: Silicatein alpha
著者Goerlich, S, Leonarski, R.J, Tomizaki, T, Zlotnikov, I.
登録日2020-07-09
公開日2020-12-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Natural hybrid silica/protein superstructure at atomic resolution.
Proc.Natl.Acad.Sci.USA, 117, 2020
6YI7
DownloadVisualize
BU of 6yi7 by Molmil
Structure of cathepsin B1 from Schistosoma mansoni (SmCB1) in complex with an azanitrile inhibitor
分子名称: 1-[(2~{S})-1-[[iminomethyl(methyl)amino]-methyl-amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-3-(phenylmethyl)urea, ACETATE ION, Cathepsin B-like peptidase (C01 family)
著者Jilkova, A, Rezacova, P, Pachl, P, Fanfrlik, J, Rubesova, P, Guetschow, M, Mares, M.
登録日2020-04-01
公開日2020-12-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Azanitrile Inhibitors of the SmCB1 Protease Target Are Lethal to Schistosoma mansoni : Structural and Mechanistic Insights into Chemotype Reactivity.
Acs Infect Dis., 7, 2021

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon