Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6FOY
DownloadVisualize
BU of 6foy by Molmil
The crystal structure of P.fluorescens Kynurenine 3-monooxygenase (KMO) in complex with competitive inhibitor No. 9
分子名称: 5-[2,3-bis(chloranyl)phenyl]furan-2-carboxylic acid, CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Levy, C.W, Leys, D.
登録日2018-02-08
公開日2019-08-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A brain-permeable inhibitor of the neurodegenerative disease target kynurenine 3-monooxygenase prevents accumulation of neurotoxic metabolites.
Commun Biol, 2, 2019
8FRG
DownloadVisualize
BU of 8frg by Molmil
Mouse acidic mammalian chitinase, catalytic domain in complex with N,N'-diacetylchitobiose at pH 5.43
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acidic mammalian chitinase, ...
著者Diaz, R.E, Fraser, J.S.
登録日2023-01-06
公開日2023-03-15
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural characterization of ligand binding and pH-specific enzymatic activity of mouse Acidic Mammalian Chitinase.
Biorxiv, 2024
7O4F
DownloadVisualize
BU of 7o4f by Molmil
The DYW domain of A. thaliana OTP86 in its active state
分子名称: Pentatricopeptide repeat-containing protein At3g63370, chloroplastic, ZINC ION
著者Weber, G, Palm, G.J, Takenaka, M, Barthel, T, Feiler, C, Weiss, M.S.
登録日2021-04-06
公開日2021-06-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献DYW domain structures imply an unusual regulation principle in plant organellar RNA editing catalysis.
Nat Catal, 4, 2021
6FPL
DownloadVisualize
BU of 6fpl by Molmil
TETR(D) E147A MUTANT IN COMPLEX WITH TETRACYCLINE AND MAGNESIUM
分子名称: CHLORIDE ION, MAGNESIUM ION, TETRACYCLINE, ...
著者Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
登録日2018-02-11
公開日2019-03-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
4MZ4
DownloadVisualize
BU of 4mz4 by Molmil
Discovery of an Irreversible HCV NS5B Polymerase Inhibitor
分子名称: 1-[(2-chloroquinolin-3-yl)methyl]-6-fluoro-5-methyl-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxylic acid, PHOSPHATE ION, RNA-directed RNA polymerase
著者Zeng, Q, Anilkumar, G.N, Rosenblum, S.B, Huang, H.-C, Lesburg, C.A, Jiang, Y, Selyutin, O, Chan, T.-Y, Bennett, F, Chen, K.X, Venkatraman, S, Sannigrahi, M, Velazquez, F, Duca, J.S, Gavalas, S, Huang, Y, Pu, H, Wang, L, Pinto, P, Vibulbhan, B, Agrawal, S, Ferrari, E, Jiang, C.-K, Li, C, Hesk, D, Gesell, J, Sorota, S, Shih, N.-Y, Njoroge, F.G, Kozlowski, J.A.
登録日2013-09-29
公開日2013-12-11
最終更新日2013-12-18
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Discovery of an irreversible HCV NS5B polymerase inhibitor.
Bioorg.Med.Chem.Lett., 23, 2013
4MZQ
DownloadVisualize
BU of 4mzq by Molmil
beta-Alanyl-CoA:Ammonia Lyase from Clostridium propionicum in complex with propionyl-CoA
分子名称: beta-Alanyl-CoA:Ammonia Lyase, propionyl Coenzyme A
著者Heine, A, Reuter, K.
登録日2013-09-30
公開日2014-03-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.587 Å)
主引用文献High resolution crystal structure of Clostridium propionicum beta-alanyl-CoA:ammonia lyase, a new member of the "hot dog fold" protein superfamily.
Proteins, 82, 2014
4MUF
DownloadVisualize
BU of 4muf by Molmil
Crystal structure of pantothenate synthetase in complex with 2-(2-(4-tert-butylphenylsulfonylcarbamoyl)-5-methoxy-1H-indol-1-yl)acetic acid
分子名称: (2-{[(4-tert-butylphenyl)sulfonyl]carbamoyl}-5-methoxy-1H-indol-1-yl)acetic acid, ETHANOL, Pantothenate synthetase
著者Silvestre, H.L, Blundell, T.L.
登録日2013-09-21
公開日2014-08-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Optimization of Inhibitors of Mycobacterium tuberculosis Pantothenate Synthetase Based on Group Efficiency Analysis.
Chemmedchem, 11, 2016
8FM0
DownloadVisualize
BU of 8fm0 by Molmil
HIV-1 gp120 complex with CJF-III-214
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, methyl (2R,3S)-2-(carbamimidamidomethyl)-3-[2-(4-chloro-3-fluoroanilino)(oxo)acetamido]-6-[(methylamino)methyl]-2,3-dihydro-1H-indole-1-carboxylate
著者Gong, Z, Hendrickson, W.A.
登録日2022-12-22
公開日2023-04-05
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Indoline CD4-mimetic compounds mediate potent and broad HIV-1 inhibition and sensitization to antibody-dependent cellular cytotoxicity.
Proc.Natl.Acad.Sci.USA, 120, 2023
7P6G
DownloadVisualize
BU of 7p6g by Molmil
Crystal structure of the endoglucanase RBcel1 E135Q
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endoglucanase
著者Collet, L, Dutoit, R.
登録日2021-07-16
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Highlighting the factors governing transglycosylation in the GH5_5 endo-1,4-beta-glucanase RBcel1.
Acta Crystallogr D Struct Biol, 78, 2022
6G8T
DownloadVisualize
BU of 6g8t by Molmil
Crystal Structures of the Single PDZ Domains from GRASP65 and their Interaction with the Golgin GM130
分子名称: GLYCEROL, Golgi reassembly-stacking protein 1
著者Jurk, C.M, Roske, Y, Heinemann, U.
登録日2018-04-10
公開日2019-04-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Crystal Structures of the Single PDZ Domains from GRASP65 and their Interaction with the Golgin GM130
Croatica Chemica Acta, 2018
7P6J
DownloadVisualize
BU of 7p6j by Molmil
Crystal structure of glycosyl-enzyme intermediate of RBcel1 Y201F
分子名称: Endoglucanase, beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, ...
著者Collet, L, Dutoit, R.
登録日2021-07-16
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Highlighting the factors governing transglycosylation in the GH5_5 endo-1,4-beta-glucanase RBcel1.
Acta Crystallogr D Struct Biol, 78, 2022
8FM4
DownloadVisualize
BU of 8fm4 by Molmil
HIV-1 gp120 complex with CJF-IV-047
分子名称: 2,2,2-trifluoroethyl (2R,3S)-2-(carbamimidamidomethyl)-3-[2-(4-chloro-3-fluoroanilino)(oxo)acetamido]-6-[(methylamino)methyl]-2,3-dihydro-1H-indole-1-carboxylate, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120
著者Gong, Z, Hendrickson, W.A.
登録日2022-12-22
公開日2023-04-05
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Indoline CD4-mimetic compounds mediate potent and broad HIV-1 inhibition and sensitization to antibody-dependent cellular cytotoxicity.
Proc.Natl.Acad.Sci.USA, 120, 2023
8UDG
DownloadVisualize
BU of 8udg by Molmil
S1V2-72 Fab bound to EHA2 from influenza B/Malaysia/2506/2004
分子名称: Hemagglutinin, S1V2-72 heavy chain, S1V2-72 light chain
著者Finney, J, Kong, S, Walsh Jr, R.M, Harrison, S.C, Kelsoe, G.
登録日2023-09-28
公開日2023-11-15
最終更新日2024-01-10
実験手法ELECTRON MICROSCOPY (4.98 Å)
主引用文献Protective human antibodies against a conserved epitope in pre- and postfusion influenza hemagglutinin.
Proc.Natl.Acad.Sci.USA, 121, 2024
6FSN
DownloadVisualize
BU of 6fsn by Molmil
Catalytic domain of UDP-Glucose Glycoprotein Glucosyltransferase from Chaetomium thermophilum in complex with UDP-glucose (conformation 1)
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Roversi, P, Le Cornu, J.D, Hill, J, Alonzi, D.S, Zitzmann, N.
登録日2018-02-19
公開日2019-03-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Crystal polymorphism in fragment-based lead discovery of ligands of the catalytic domain of UGGT, the glycoprotein folding quality control checkpoint.
Front Mol Biosci, 2022
7P6I
DownloadVisualize
BU of 7p6i by Molmil
Crystal structure of the endoglucanase RBcel1 Y201F
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endoglucanase
著者Collet, L, Dutoit, R.
登録日2021-07-16
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Highlighting the factors governing transglycosylation in the GH5_5 endo-1,4-beta-glucanase RBcel1.
Acta Crystallogr D Struct Biol, 78, 2022
4N2S
DownloadVisualize
BU of 4n2s by Molmil
Crystal Structure of THA8 in complex with Zm1a-6 RNA
分子名称: THA8 RNA binding protein, Zm1a-6 RNA
著者Ke, J, Chen, R.Z, Ban, T, Zhou, X.E, Gu, X, Brunzelle, J.S, Zhu, J.K, Melcher, K, Xu, H.E.
登録日2013-10-06
公開日2013-10-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for RNA recognition by a dimeric PPR-protein complex.
Nat.Struct.Mol.Biol., 20, 2013
4MWE
DownloadVisualize
BU of 4mwe by Molmil
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-(3-{[5-chloro-3-(prop-2-en-1-yl)-2-(prop-2-en-1-yloxy)benzyl]amino}propyl)-3-thiophen-3-ylurea (Chem 1475)
分子名称: 1-(3-{[5-chloro-3-(prop-2-en-1-yl)-2-(prop-2-en-1-yloxy)benzyl]amino}propyl)-3-thiophen-3-ylurea, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
登録日2013-09-24
公開日2014-04-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014
7P6H
DownloadVisualize
BU of 7p6h by Molmil
Crystal structure of the endoglucanase RBcel1 E135Q in complex with cellotriose
分子名称: 1,2-ETHANEDIOL, Endoglucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Collet, L, Dutoit, R.
登録日2021-07-16
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Highlighting the factors governing transglycosylation in the GH5_5 endo-1,4-beta-glucanase RBcel1.
Acta Crystallogr D Struct Biol, 78, 2022
4MX2
DownloadVisualize
BU of 4mx2 by Molmil
Crystal Structure of adenylosuccinate lyase from Leishmania donovani
分子名称: ADENOSINE MONOPHOSPHATE, Adenylosuccinate lyase, GLYCEROL, ...
著者Wernimont, A.K, Loppnau, P, Dong, A, Krojer, T, Bradley, A, Bushell, S, von Delft, F, Robinson, D, Gilbert, I, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Hui, R, Mottaghi, K, Structural Genomics Consortium (SGC)
登録日2013-09-25
公開日2014-04-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of adenylosuccinate lyase from Leishmania donovani
To be Published
8FZQ
DownloadVisualize
BU of 8fzq by Molmil
Dehosphorylated, ATP-bound human cystic fibrosis transmembrane conductance regulator (CFTR)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
著者Levring, J, Terry, D.S, Kilic, Z, Fitzgerald, G.A, Blanchard, S.C, Chen, J.
登録日2023-01-29
公開日2023-03-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献CFTR function, pathology and pharmacology at single-molecule resolution.
Nature, 616, 2023
7OXG
DownloadVisualize
BU of 7oxg by Molmil
ttSlyD FKBP domain with M8A pseudo-wild-type S2 peptide
分子名称: 30S ribosomal protein S2, CHLORIDE ION, IMIDAZOLE, ...
著者Pazicky, S, Lei, J, Loew, C.
登録日2021-06-22
公開日2022-03-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Impact of distant peptide substrate residues on enzymatic activity of SlyD.
Cell.Mol.Life Sci., 79, 2022
8FLZ
DownloadVisualize
BU of 8flz by Molmil
HIV-1 gp120 complex with CJF-III-049-S
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, N~1~-{(1R,2R,3S)-2-(carbamimidamidomethyl)-3-[(3S)-3,4-dihydroxybutyl]-5-[(methylamino)methyl]-2,3-dihydro-1H-inden-1-yl}-N~2~-(4-chloro-3-fluorophenyl)ethanediamide
著者Gong, Z, Hendrickson, W.A.
登録日2022-12-22
公開日2023-04-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Indoline CD4-mimetic compounds mediate potent and broad HIV-1 inhibition and sensitization to antibody-dependent cellular cytotoxicity.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FM5
DownloadVisualize
BU of 8fm5 by Molmil
HIV-1 gp120 complex with DY-III-065
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3,3,3-trifluoropropyl (2R,3S)-2-(carbamimidamidomethyl)-3-[2-(4-chloro-3-fluoroanilino)(oxo)acetamido]-6-[(methylamino)methyl]-2,3-dihydro-1H-indole-1-carboxylate, Envelope glycoprotein gp120
著者Gong, Z, Hendrickson, W.A.
登録日2022-12-22
公開日2023-04-05
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Indoline CD4-mimetic compounds mediate potent and broad HIV-1 inhibition and sensitization to antibody-dependent cellular cytotoxicity.
Proc.Natl.Acad.Sci.USA, 120, 2023
8UH4
DownloadVisualize
BU of 8uh4 by Molmil
Cryo-EM structure of Maize Streak Virus (MSV) - single head Geminivirus
分子名称: Capsid protein, genomic DNA
著者Bennett, A.B, McKenna, R, Mietzsch, M, Hull, J.A.
登録日2023-10-06
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献The Two States of MSV Gemini Capsid Assembly
To Be Published
8FM7
DownloadVisualize
BU of 8fm7 by Molmil
HIV-1 gp120 complex with CJF-III-192
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, benzyl (2R,3S)-2-(carbamimidamidomethyl)-3-[2-(4-chloro-3-fluoroanilino)(oxo)acetamido]-6-[(methylamino)methyl]-2,3-dihydro-1H-indole-1-carboxylate
著者Gong, Z, Hendrickson, W.A.
登録日2022-12-22
公開日2023-04-05
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Indoline CD4-mimetic compounds mediate potent and broad HIV-1 inhibition and sensitization to antibody-dependent cellular cytotoxicity.
Proc.Natl.Acad.Sci.USA, 120, 2023

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon