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7WRJ
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Local CryoEM structure of the SARS-CoV-2 S6P(B.1.1.529) in complex with BD55-4637 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BD55-4637H, BD55-4637L, ...
著者Du, S, Xiao, J.Y.
登録日2022-01-26
公開日2022-09-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.08 Å)
主引用文献Rational identification of potent and broad sarbecovirus-neutralizing antibody cocktails from SARS convalescents.
Cell Rep, 41, 2022
6IGU
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Crystal structure of the hydrolytic antibody Fab 9C10
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, IMMUNOGLOBULIN 9C10 H CHAIN, IMMUNOGLOBULIN 9C10 L CHAIN, ...
著者Yamaguchi, A, Tada, T, Tsuchiya, Y, Tsumuraya, T, Fujii, I.
登録日2018-09-26
公開日2019-10-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Crystal structure of the complex of the hydrolytic antibody Fab 9C10 and a transition-state analog
To Be Published
2XA3
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crystal structure of the broadly neutralizing llama VHH D7 and its mode of HIV-1 gp120 interaction
分子名称: LLAMA HEAVY CHAIN ANTIBODY D7, SULFATE ION
著者Hinz, A, Lutje Hulsik, D, Forsman, A, Koh, W, Belrhali, H, Gorlani, A, de Haard, H, Weiss, R.A, Verrips, T, Weissenhorn, W.
登録日2010-03-29
公開日2010-05-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the neutralizing Llama V(HH) D7 and its mode of HIV-1 gp120 interaction.
PLoS ONE, 5, 2010
4G5Z
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BU of 4g5z by Molmil
Crystal structure of the therapeutical antibody fragment of canakinumab in its unbound state
分子名称: canakinumab antibody fragment heavy chain, canakinumab antibody fragment light chain
著者Blech, M, Hoerer, S.
登録日2012-07-18
公開日2012-12-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献One target-two different binding modes: Structural insights into gevokizumab and canakinumab interactions to interleukin-1beta
J.Mol.Biol., 425, 2013
7T4S
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BU of 7t4s by Molmil
CryoEM structure of the HCMV Pentamer gH/gL/UL128/UL130/UL131A in complex with NRP2 and neutralizing fabs 8I21 and 13H11
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Envelope glycoprotein H, ...
著者Kschonsak, M, Johnson, M.C, Schelling, R, Green, E.M, Rouge, L, Ho, H, Patel, N, Kilic, C, Kraft, E, Arthur, C.P, Rohou, A.L, Comps-Agrar, L, Martinez-Martin, N, Perez, L, Payandeh, J, Ciferri, C.
登録日2021-12-10
公開日2022-03-23
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for HCMV Pentamer receptor recognition and antibody neutralization.
Sci Adv, 8, 2022
7T4Q
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CryoEM structure of the HCMV Pentamer gH/gL/UL128/UL130/UL131A in complex with neutralizing fabs 2C12, 7I13 and 13H11
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein H, Envelope glycoprotein L, ...
著者Kschonsak, M, Johnson, M.C, Schelling, R, Green, E.M, Rouge, L, Ho, H, Patel, N, Kilic, C, Kraft, E, Arthur, C.P, Rohou, A.L, Comps-Agrar, L, Martinez-Martin, N, Perez, L, Payandeh, J, Ciferri, C.
登録日2021-12-10
公開日2022-03-23
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis for HCMV Pentamer receptor recognition and antibody neutralization.
Sci Adv, 8, 2022
7T4R
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CryoEM structure of the HCMV Pentamer gH/gL/UL128/UL130/UL131A in complex with THBD and neutralizing fabs MSL-109 and 13H11
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein H, Envelope glycoprotein L, ...
著者Kschonsak, M, Johnson, M.C, Schelling, R, Green, E.M, Rouge, L, Ho, H, Patel, N, Kilic, C, Kraft, E, Arthur, C.P, Rohou, A.L, Comps-Agrar, L, Martinez-Martin, N, Perez, L, Payandeh, J, Ciferri, C.
登録日2021-12-10
公開日2022-03-23
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for HCMV Pentamer receptor recognition and antibody neutralization.
Sci Adv, 8, 2022
15C8
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CATALYTIC ANTIBODY 5C8, FREE FAB
分子名称: IGG 5C8 FAB (HEAVY CHAIN), IGG 5C8 FAB (LIGHT CHAIN)
著者Gruber, K, Wilson, I.A.
登録日1998-03-18
公開日1999-03-23
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Ligand-Induced Conformational Changes in a Catalytic Antibody: Comparison of the Bound and Unbound Structure of Fab 5C8
To be Published
1Q9L
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S25-2 Fab Unliganded 2
分子名称: MAGNESIUM ION, S25-2 Fab (IgG1k) heavy chain, S25-2 Fab (IgG1k) light chain, ...
著者Nguyen, H.P, Seto, N.O, MacKenzie, C.R, Brade, L, Kosma, P, Brade, H, Evans, S.V.
登録日2003-08-25
公開日2004-01-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Germline antibody recognition of distinct carbohydrate epitopes.
Nat.Struct.Biol., 10, 2003
1Q9O
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S45-18 Fab Unliganded
分子名称: MAGNESIUM ION, S45-2 Fab (IgG1k) heavy chain, S45-2 Fab (IgG1k) light chain
著者Nguyen, H.P, Seto, N.O, MacKenzie, C.R, Brade, L, Kosma, P, Brade, H, Evans, S.V.
登録日2003-08-25
公開日2004-01-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Germline antibody recognition of distinct carbohydrate epitopes.
Nat.Struct.Biol., 10, 2003
6EA7
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BU of 6ea7 by Molmil
Structure of EBOV GPcl in complex with the pan-ebolavirus mAb ADI-15878
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者West, B.R, Moyer, C.L, King, L.B, Fusco, M.L, Milligan, J.C, Hui, S, Saphire, E.O.
登録日2018-08-02
公開日2018-09-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.25 Å)
主引用文献Structural Basis of Pan-Ebolavirus Neutralization by a Human Antibody against a Conserved, yet Cryptic Epitope.
MBio, 9, 2018
2OK0
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BU of 2ok0 by Molmil
Fab ED10-DNA complex
分子名称: 5'-D(*TP*C)-3', Fab ED10 heavy chain, Fab ED10 light chain
著者Stanfield, R.L, Sanguineti, S, Wilson, I.A, de Prat-Gay, G.
登録日2007-01-15
公開日2007-06-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Specific recognition of a DNA immunogen by its elicited antibody
J.Mol.Biol., 370, 2007
4DZ8
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BU of 4dz8 by Molmil
human IgG1 Fc fragment Heterodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region
著者Strop, P.
登録日2012-02-29
公開日2012-08-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Generating Bispecific Human IgG1 and IgG2 Antibodies from Any Antibody Pair.
J.Mol.Biol., 420, 2012
4G6J
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BU of 4g6j by Molmil
Crystal structure of human IL-1beta in complex with the therapeutic antibody binding fragment of canakinumab
分子名称: Interleukin-1 beta, heavy chain of antibody binding fragment of canakinumab, light chain of antibody binding fragment of canakinumab
著者Blech, M, Hoerer, S.
登録日2012-07-19
公開日2012-12-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献One traget-two different binding modes: Structural insights into gevokizumab and canakinumab interactions to interleukin-1beta
J.Mol.Biol., 425, 2013
1Q9K
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BU of 1q9k by Molmil
S25-2 Fab Unliganded 1
分子名称: MAGNESIUM ION, S25-2 Fab (IgG1k) heavy chain, S25-2 Fab (IgG1k) light chain
著者Nguyen, H.P, Seto, N.O, MacKenzie, C.R, Brade, L, Kosma, P, Brade, H, Evans, S.V.
登録日2003-08-25
公開日2004-01-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Germline antibody recognition of distinct carbohydrate epitopes.
Nat.Struct.Biol., 10, 2003
4TQE
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BU of 4tqe by Molmil
Structure of tau peptide in complex with Tau5 antibody Fab fragment
分子名称: Fab heavy chain, If kappa light chain, Microtubule-associated protein tau, ...
著者Cehlar, O, Skrabana, R, Novak, M.
登録日2014-06-11
公開日2015-07-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of tau peptide in complex with Tau5 antibody Fab fragment
To Be Published
4TTD
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BU of 4ttd by Molmil
Structure of a lysozyme antibody complex
分子名称: FAb Heavy Chain, FAb Light Chain, Lysozyme C
著者Wensley, B.
登録日2014-06-20
公開日2015-07-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure of a lysozyme antibody complex
To Be Published
6VRQ
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BU of 6vrq by Molmil
Crystal structure of gl12A21 Fab in complex with anti-idiotypic iv12 Fab
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Aljedani, S.S, Weidle, C, Pancera, M.
登録日2020-02-08
公開日2021-02-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Development of a VRC01-class germline targeting immunogen derived from anti-idiotypic antibodies.
Cell Rep, 35, 2021
7P40
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P5C3 is a potent fab neutralizer
分子名称: Spike glycoprotein, Variable Heavy Chain P5C3 (VH), Variable Light Chain P5C3 (VL)
著者perez, L.
登録日2021-07-09
公開日2021-10-13
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A highly potent antibody effective against SARS-CoV-2 variants of concern.
Cell Rep, 37, 2021
7PHG
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MaP OF P5C3RBD Interface
分子名称: Heavy ChaIn variable, Light ChaIn, Surface glycoprotein
著者Perez, L.
登録日2021-08-17
公開日2021-10-13
最終更新日2021-10-27
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献A highly potent antibody effective against SARS-CoV-2 variants of concern.
Cell Rep, 37, 2021
7V5N
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BU of 7v5n by Molmil
Crystal structure of Fab fragment of bevacizumab bound to DNA aptamer
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*GP*CP*GP*GP*TP*TP*GP*GP*TP*GP*GP*TP*AP*GP*TP*TP*AP*CP*GP*TP*TP*CP*GP*C)-3'), IMIDAZOLE, ...
著者Hishiki, A, Tong, J, Todoroki, K, Hashimoto, H.
登録日2021-08-17
公開日2022-02-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Development of a DNA aptamer that binds to the complementarity-determining region of therapeutic monoclonal antibody and affinity improvement induced by pH-change for sensitive detection.
Biosens.Bioelectron., 203, 2022
3CMO
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BU of 3cmo by Molmil
HIV neutralizing monoclonal antibody YZ18
分子名称: Fab heavy chain, Fab light chain
著者Jin, L, Prasad, V, Paul, S.
登録日2008-03-24
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献HIV neutralizing monoclonal antibody YZ18
TO BE PUBLISHED
6EA5
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Structure of BDBV GPcl in complex with the pan-ebolavirus mAb ADI-15878
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADI-15878 Fab Heavy Chain, ...
著者King, L.B, West, B.R, Moyer, C.L, Fusco, M.L, Milligan, J.C, Hui, S, Saphire, E.O.
登録日2018-08-02
公開日2018-09-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.75 Å)
主引用文献Structural Basis of Pan-Ebolavirus Neutralization by a Human Antibody against a Conserved, yet Cryptic Epitope.
MBio, 9, 2018
1SJX
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BU of 1sjx by Molmil
Three-Dimensional Structure of a Llama VHH Domain OE7 binding the cell wall protein Malf1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, immunoglobulin VH domain
著者Dolk, E, van der Vaart, M, Hulsik, D.L, Vriend, G, de Haard, H, Spinelli, S, Cambillau, C, Frenken, L, Verrips, T.
登録日2004-03-04
公開日2005-03-15
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Isolation of llama antibody fragments for prevention of dandruff by phage display in shampoo.
Appl.Environ.Microbiol., 71, 2005
5DD3
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Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques
分子名称: ANTI-HIV ANTIBODY DH570.4 FAB HEAVY CHAIN, ANTI-HIV ANTIBODY DH570.4 FAB LIGHT CHAIN
著者Nicely, N.I, Pemble IV, C.W, Haynes, B.F.
登録日2015-08-24
公開日2016-05-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献Initiation of immune tolerance-controlled HIV gp41 neutralizing B cell lineages.
Sci Transl Med, 8, 2016

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