PDB: 813 件ウェブページステータス検索Chemie searchBIRD

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7UND	Pol II-DSIF-SPT6-PAF1c-TFIIS-nucleosome complex (stalled at +38) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ... 著者 Filipovski, M, Vos, S.M, Farnung, L. 登録日 2022-04-10 公開日 2022-10-19 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of nucleosome retention during transcription elongation. Science, 376, 2022
7UNC	Pol II-DSIF-SPT6-PAF1c-TFIIS complex with rewrapped nucleosome 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ... 著者 Filipovski, M, Vos, S.M, Farnung, L. 登録日 2022-04-10 公開日 2022-10-19 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of nucleosome retention during transcription elongation. Science, 376, 2022
7K5Y	Cryo-EM structure of a chromatosome containing human linker histone H1.4 分子名称: DNA (197-MER), Histone H1.4, Histone H2A type 1-B/E, ... 著者 Zhou, B.-R, Bai, Y. 登録日 2020-09-17 公開日 2020-11-25 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.76 Å) 主引用文献 Distinct Structures and Dynamics of Chromatosomes with Different Human Linker Histone Isoforms. Mol.Cell, 81, 2021
7SWY	2.6 A structure of a 40-601[TA-rich+1]-40 nucleosome 分子名称: DNA Guide Strand, DNA Tracking Strand, Histone H2A, ... 著者 Nodelman, I.M, Bowman, G.D, Armache, J.-P. 登録日 2021-11-21 公開日 2022-03-02 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Nucleosome recognition and DNA distortion by the Chd1 remodeler in a nucleotide-free state. Nat.Struct.Mol.Biol., 29, 2022
7M1X	Cryo-EM Structure of Nucleosome containing mouse histone variant H2A.Z 分子名称: DNA (136-MER), Histone H2A.Z, Histone H2B 1.1, ... 著者 Tan, D, Lewis, T. 登録日 2021-03-15 公開日 2021-09-29 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural basis of chromatin regulation by histone variant H2A.Z. Nucleic Acids Res., 49, 2021
7U51	Nucleosome core particle with AP-site at SHL-6 分子名称: DNA (145-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ... 著者 Freudenthal, B.D, Weaver, T.M. 登録日 2022-03-01 公開日 2022-09-07 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis for APE1 processing DNA damage in the nucleosome. Nat Commun, 13, 2022
7K5X	Cryo-EM structure of a chromatosome containing human linker histone H1.0 分子名称: DNA (197-MER), Histone H1.0, Histone H2A type 1-B/E, ... 著者 Zhou, B.-R, Bai, Y. 登録日 2020-09-17 公開日 2020-11-25 最終更新日 2021-01-20 実験手法 ELECTRON MICROSCOPY (2.93 Å) 主引用文献 Distinct Structures and Dynamics of Chromatosomes with Different Human Linker Histone Isoforms. Mol.Cell, 81, 2021
7V1M	Structural basis for the co-chaperone relationship of sNASP and ASF1b 分子名称: Histone H3.3, Histone H4, Histone chaperone ASF1B, ... 著者 Bao, H, Huang, H. 登録日 2021-08-04 公開日 2022-04-20 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.834 Å) 主引用文献 NASP maintains histone H3-H4 homeostasis through two distinct H3 binding modes. Nucleic Acids Res., 50, 2022
7UV9	KDM2A-nucleosome structure stabilized by H3K36C-UNC8015 covalent conjugate 分子名称: DNA (185-MER), FE (III) ION, Histone H2A type 1, ... 著者 Spangler, C.J, Skrajna, A, Foley, C.A, Budziszewski, G.R, Azzam, D.N, James, L.I, Frye, S.V, McGinty, R.K. 登録日 2022-04-29 公開日 2023-02-22 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis of paralog-specific KDM2A/B nucleosome recognition. Nat.Chem.Biol., 19, 2023
7TN2	Composite model of a Chd1-nucleosome complex in the nucleotide-free state derived from 2.3A and 2.7A Cryo-EM maps 分子名称: Chromo domain-containing protein 1, DNA Lagging Strand, DNA Tracking Strand, ... 著者 Nodelman, I.M, Bowman, G.D, Armache, J.-P. 登録日 2022-01-20 公開日 2022-03-02 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (2.3 Å) 主引用文献 Nucleosome recognition and DNA distortion by the Chd1 remodeler in a nucleotide-free state. Nat.Struct.Mol.Biol., 29, 2022
7U46	Cryo-EM structure of CENP-A nucleosome (palindromic alpha satellite DNA) in complex with CENP-N 分子名称: Centromere protein N, DNA (147-MER), Histone H2A, ... 著者 Zhou, K, Luger, K. 登録日 2022-02-28 公開日 2022-03-16 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (2.68 Å) 主引用文献 CENP-N promotes the compaction of centromeric chromatin. Nat.Struct.Mol.Biol., 29, 2022
7U47	CryoEM structure of CENP-N promoted nucleosome stacks with CENP-A and palindromic alpha satellite DNA sequence 分子名称: Centromere protein N, DNA (147-MER), Histone H2A, ... 著者 Zhou, K, Luger, K. 登録日 2022-02-28 公開日 2022-03-16 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 CENP-N promotes the compaction of centromeric chromatin. Nat.Struct.Mol.Biol., 29, 2022
7U50	APE1 bound to a nucleosome core particle with AP-site at SHL-6 分子名称: DNA (144-MER), DNA (145-MER), DNA-(apurinic or apyrimidinic site) endonuclease, ... 著者 Weaver, T.M, Freudenthal, B.D. 登録日 2022-03-01 公開日 2022-09-07 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis for APE1 processing DNA damage in the nucleosome. Nat Commun, 13, 2022
7U52	nucleosome core particle with AP-site at SHL-6.5 分子名称: DNA (145-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ... 著者 Freudenthal, B.D, Weaver, T.M. 登録日 2022-03-01 公開日 2022-09-07 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis for APE1 processing DNA damage in the nucleosome. Nat Commun, 13, 2022
7U53	Nucleosome core particle with AP-site at SHL0 分子名称: DNA (144-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ... 著者 Freudenthal, B.D, Weaver, T.M. 登録日 2022-03-01 公開日 2022-09-07 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural basis for APE1 processing DNA damage in the nucleosome. Nat Commun, 13, 2022
7MBN	Cryo-EM structure of MLL1-NCP (H3K4M) complex, mode02 分子名称: DNA (146-MER), Histone H2A, Histone H2B 1.1, ... 著者 Park, S.H, Ayoub, A, Lee, Y.T, Dou, Y, Cho, U. 登録日 2021-04-01 公開日 2021-12-29 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY 主引用文献 Regulation of MLL1 Methyltransferase Activity in Two Distinct Nucleosome Binding Modes. Biochemistry, 61, 2022
7MBM	Cryo-EM structure of MLL1-NCP (H3K4M) complex, mode01 分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ... 著者 Park, S.H, Ayoub, A, Lee, Y.T, Dou, Y, Cho, U. 登録日 2021-04-01 公開日 2021-12-29 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY 主引用文献 Regulation of MLL1 Methyltransferase Activity in Two Distinct Nucleosome Binding Modes. Biochemistry, 61, 2022
2YFV	The heterotrimeric complex of Kluyveromyces lactis Scm3, Cse4 and H4 分子名称: HISTONE H3-LIKE CENTROMERIC PROTEIN CSE4, HISTONE H4, IODIDE ION, ... 著者 Cho, U.S, Harrison, S.C. 登録日 2011-04-08 公開日 2011-05-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 Recognition of the Centromere-Specific Histone Cse4 by the Chaperone Scm3. Proc.Natl.Acad.Sci.USA, 108, 2011
6OM3	Crystal structure of the Orc1 BAH domain in complex with a nucleosome core particle 分子名称: DNA (146-MER), DNA (147-MER), Histone H2A, ... 著者 De Ioannes, P.E, Wang, M, Armache, K.-J. 登録日 2019-04-18 公開日 2019-07-10 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structure and function of the Orc1 BAH-nucleosome complex. Nat Commun, 10, 2019
6PA7	The cryo-EM structure of the human DNMT3A2-DNMT3B3 complex bound to nucleosome. 分子名称: CHLORIDE ION, DNA (167-MER), DNA (cytosine-5)-methyltransferase 3A, ... 著者 Xu, T.H, Liu, M, Zhou, X.E, Liang, G, Zhao, G, Xu, H.E, Melcher, K, Jones, P.A. 登録日 2019-06-11 公開日 2020-06-17 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (2.94 Å) 主引用文献 Structure of nucleosome-bound DNA methyltransferases DNMT3A and DNMT3B. Nature, 586, 2020
3A6N	The nucleosome containing a testis-specific histone variant, human H3T 分子名称: 146-MER DNA, CHLORIDE ION, Histone H2A type 1-B/E, ... 著者 Tachiwana, H, Kagawa, W, Osakabe, A, Koichiro, K, Shiga, T, Kimura, H, Kurumizaka, H. 登録日 2009-09-04 公開日 2010-05-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural basis of instability of the nucleosome containing a testis-specific histone variant, human H3T Proc.Natl.Acad.Sci.USA, 107, 2010
2YFW	Heterotetramer structure of Kluyveromyces lactis Cse4,H4 分子名称: HISTONE H3-LIKE CENTROMERIC PROTEIN CSE4, HISTONE H4 著者 Cho, U.S, Harrison, S.C. 登録日 2011-04-08 公開日 2011-05-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Recognition of the Centromere-Specific Histone Cse4 by the Chaperone Scm3. Proc.Natl.Acad.Sci.USA, 108, 2011
3AZN	Crystal Structure of Human Nucleosome Core Particle Containing H4K91Q mutation 分子名称: 146-MER DNA, CHLORIDE ION, Histone H2A type 1-B/E, ... 著者 Iwasaki, W, Tachiwana, H, Kawaguchi, K, Shibata, T, Kagawa, W, Kurumizaka, H. 登録日 2011-05-25 公開日 2011-09-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Comprehensive Structural Analysis of Mutant Nucleosomes Containing Lysine to Glutamine (KQ) Substitutions in the H3 and H4 Histone-Fold Domains Biochemistry, 50, 2011
3AZF	Crystal Structure of Human Nucleosome Core Particle Containing H3K79Q mutation 分子名称: 146-MER DNA, CHLORIDE ION, Histone H2A type 1-B/E, ... 著者 Iwasaki, W, Tachiwana, H, Kawaguchi, K, Shibata, T, Kagawa, W, Kurumizaka, H. 登録日 2011-05-25 公開日 2011-09-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Comprehensive Structural Analysis of Mutant Nucleosomes Containing Lysine to Glutamine (KQ) Substitutions in the H3 and H4 Histone-Fold Domains Biochemistry, 50, 2011
3AZH	Crystal Structure of Human Nucleosome Core Particle Containing H3K122Q mutation 分子名称: 146-MER DNA, CHLORIDE ION, Histone H2A type 1-B/E, ... 著者 Iwasaki, W, Tachiwana, H, Kawaguchi, K, Shibata, T, Kagawa, W, Kurumizaka, H. 登録日 2011-05-25 公開日 2011-09-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.49 Å) 主引用文献 Comprehensive Structural Analysis of Mutant Nucleosomes Containing Lysine to Glutamine (KQ) Substitutions in the H3 and H4 Histone-Fold Domains Biochemistry, 50, 2011

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